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Lag0002623 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002623
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzinc finger protein GIS3-like
Genome locationchr4:44320326..44320838
RNA-Seq ExpressionLag0002623
SyntenyLag0002623
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046676.1 zinc finger protein 6-like [Cucumis melo var. makuwa]3.1e-6075Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPD--GSGADP--NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS
        MSN NPSSILKLFGFPLVEHDD P ETPD  G GAD   NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRP  LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPD--GSGADP--NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS

Query:  SVFSGNI------GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS
        SVF  N       GGGGGSR LPR+GNGYFA  AAYGGVSA+SGRWMFGNS E      GCKLGGEKG        VDLHLKLSPS S
Subjt:  SVFSGNI------GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS

KAG7025578.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-6681.46Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGA-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAA-------ALRPA
        MSNQNPSSILKLFGFPLVEHDDLP  TPDG G  D NSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AA       ALRP 
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGA-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAA-------ALRPA

Query:  PLYSSVFSGNIGGG-GGSRFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSG
        P YSSVF  NIGGG  G RFLPRS NGYF AAYGGVSA SGRWMFGNSGE    GGEKG STD VGVVDLHLKLSPSG
Subjt:  PLYSSVFSGNIGGG-GGSRFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSG

XP_008451655.1 PREDICTED: zinc finger protein 6-like [Cucumis melo]1.4e-6076.22Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPD--GSGADP--NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS
        MSN NPSSILKLFGFPLVEHDD P ETPD  G GAD   NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRP  LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPD--GSGADP--NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS

Query:  SVFSGNI---GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS
        SVF  N    GGGGGSR LPR+GNGYFA  AAYGGVSA+SGRWMFGNS E      GCKLGGEKG        VDLHLKLSPS S
Subjt:  SVFSGNI---GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS

XP_023004876.1 zinc finger protein GIS3-like [Cucurbita maxima]4.4e-6782.08Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGA-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSVF
        MSNQNPS+ILKLFGFPLVEHDDLP  TPDG G  D NSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AAALRP P YSSVF
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGA-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSVF

Query:  SGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSG
          +IGGGGG    RFLPRS +GYF AAYGGVSA SGRWMFGNSGE    GGEKG STD V VVDLHLKLSPSG
Subjt:  SGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSG

XP_023514545.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]9.0e-6882.66Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGA-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSVF
        MSNQNPSSILKLFG PLVEHDDLP  TPDG G  D NSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AAALRP P YSSVF
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGA-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSVF

Query:  SGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSG
          NIGGGGG    RF+PRS NGYF AAYGGVS  SGRWMFGNSGE    GGEKG STD VGVVDLHLKLSPSG
Subjt:  SGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5R1 C2H2-type domain-containing protein2.2e-5674.32Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGS-GADPN-SDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSV
        MSN NPSSILKLFGFPLVEHDD P ETPDG+ GAD   S+DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRP  LYSSV
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGS-GADPN-SDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSV

Query:  FSGNIGG-GGGSRFLPR--SGNGYF--AAAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS
        F  NIGG GG SR L R  + NGYF   AAYGGVSA+SGRWMFGNS E      GCKLGGEKG        VDLHLKLSPS S
Subjt:  FSGNIGG-GGGSRFLPR--SGNGYF--AAAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS

A0A1S3BSU1 zinc finger protein 6-like6.7e-6176.22Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPD--GSGADP--NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS
        MSN NPSSILKLFGFPLVEHDD P ETPD  G GAD   NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRP  LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPD--GSGADP--NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS

Query:  SVFSGNI---GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS
        SVF  N    GGGGGSR LPR+GNGYFA  AAYGGVSA+SGRWMFGNS E      GCKLGGEKG        VDLHLKLSPS S
Subjt:  SVFSGNI---GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS

A0A5D3D1T3 Zinc finger protein 6-like1.5e-6075Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPD--GSGADP--NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS
        MSN NPSSILKLFGFPLVEHDD P ETPD  G GAD   NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRP  LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPD--GSGADP--NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYS

Query:  SVFSGNI------GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS
        SVF  N       GGGGGSR LPR+GNGYFA  AAYGGVSA+SGRWMFGNS E      GCKLGGEKG        VDLHLKLSPS S
Subjt:  SVFSGNI------GGGGGSRFLPRSGNGYFA--AAYGGVSAASGRWMFGNSGE------GCKLGGEKGSSTDHVGVVDLHLKLSPSGS

A0A6J1DIE9 zinc finger protein GIS3-like8.5e-5672.68Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGADPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALR--------PA
        MSNQNPSSILKLFGFPLV+HDD+  E  DG+    NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      A ALR        P 
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGADPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALR--------PA

Query:  PLYSSVFSGNI---GGGGG----SRFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPS
        PLYS VF+ NI   GGGGG    SRFLPR  NGYFAAAYG VSA+SGRW+FGNS       GEKGSS DHVGVVDLHLKLSPS
Subjt:  PLYSSVFSGNI---GGGGG----SRFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPS

A0A6J1KTC7 zinc finger protein GIS3-like2.2e-6782.08Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGA-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSVF
        MSNQNPS+ILKLFGFPLVEHDDLP  TPDG G  D NSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AAALRP P YSSVF
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGA-DPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSVF

Query:  SGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSG
          +IGGGGG    RFLPRS +GYF AAYGGVSA SGRWMFGNSGE    GGEKG STD V VVDLHLKLSPSG
Subjt:  SGNIGGGGGS---RFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSG

SwissProt top hitse value%identityAlignment
Q39264 Zinc finger protein 52.8e-0841.56Show/hide
Query:  SNQNPSSILKLFGFPLVEHDDLPTETPDGSGADPNSDDD----RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR
        S  +    +KLFGF L+     P  T   S +   +       ++  CQ+C + FANSQALGGHQNAHK+ER + KR
Subjt:  SNQNPSSILKLFGFPLVEHDDLPTETPDGSGADPNSDDD----RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR

Q39265 Zinc finger protein 61.2e-1140.82Show/hide
Query:  SSILKLFGFPLVEHDDLPTETPDGSGADPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY-----------FHASDHRFAAALRPAP
        +S LKLFG  L+E   +  ++ +      +  + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA             FH   +   +A  P P
Subjt:  SSILKLFGFPLVEHDDLPTETPDGSGADPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY-----------FHASDHRFAAALRPAP

Q39266 Zinc finger protein 71.4e-0737.63Show/hide
Query:  LVEHDDLPTETPDGSGADPNSDDD--------------------------------RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY
        + E DD   ETP   G + +S+ D                                R F C +CRR F +SQALGGHQNAHKRER  AKRA++
Subjt:  LVEHDDLPTETPDGSGADPNSDDD--------------------------------RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY

Q42485 Zinc finger protein 16.3e-0846.67Show/hide
Query:  DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYF---------------HASDHRFAAALRPAPLYSSV
        D R F C +C+R F +SQALGGHQNAHKRER  AKR  Y+               H S  RF A++   PL+ SV
Subjt:  DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYF---------------HASDHRFAAALRPAPLYSSV

Q9FG05 Zinc finger protein GIS27.5e-0939.33Show/hide
Query:  LKLFGFPL-VEHDDLPTETPDGSGADPNSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA
        ++LFGF     H++  ++       +   DD  +++F+C +C R F  SQALGGHQNAHKRERQ+ KR       A +FH   +  AA+
Subjt:  LKLFGFPL-VEHDDLPTETPDGSGADPNSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 52.0e-0941.56Show/hide
Query:  SNQNPSSILKLFGFPLVEHDDLPTETPDGSGADPNSDDD----RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR
        S  +    +KLFGF L+     P  T   S +   +       ++  CQ+C + FANSQALGGHQNAHK+ER + KR
Subjt:  SNQNPSSILKLFGFPLVEHDDLPTETPDGSGADPNSDDD----RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR

AT1G24625.1 zinc finger protein 71.0e-0837.63Show/hide
Query:  LVEHDDLPTETPDGSGADPNSDDD--------------------------------RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY
        + E DD   ETP   G + +S+ D                                R F C +CRR F +SQALGGHQNAHKRER  AKRA++
Subjt:  LVEHDDLPTETPDGSGADPNSDDD--------------------------------RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY

AT1G67030.1 zinc finger protein 68.8e-1340.82Show/hide
Query:  SSILKLFGFPLVEHDDLPTETPDGSGADPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY-----------FHASDHRFAAALRPAP
        +S LKLFG  L+E   +  ++ +      +  + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA             FH   +   +A  P P
Subjt:  SSILKLFGFPLVEHDDLPTETPDGSGADPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY-----------FHASDHRFAAALRPAP

AT1G80730.1 zinc-finger protein 14.5e-0946.67Show/hide
Query:  DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYF---------------HASDHRFAAALRPAPLYSSV
        D R F C +C+R F +SQALGGHQNAHKRER  AKR  Y+               H S  RF A++   PL+ SV
Subjt:  DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYF---------------HASDHRFAAALRPAPLYSSV

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein5.3e-1039.33Show/hide
Query:  LKLFGFPL-VEHDDLPTETPDGSGADPNSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA
        ++LFGF     H++  ++       +   DD  +++F+C +C R F  SQALGGHQNAHKRERQ+ KR       A +FH   +  AA+
Subjt:  LKLFGFPL-VEHDDLPTETPDGSGADPNSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTGTTCGGGTTCCCACTGGTCGAACACGACGACCTTCCGACGGAGACGCCCGACGGCAGCGGCGCCGACCCCAACTC
CGACGACGACAGGAAGTTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCGCACAAGAGAGAGCGCCAAAGGGCCAAAC
GCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGGCGCCGCTTTACTCCAGCGTTTTCTCGGGCAACATTGGCGGCGGCGGTGGTTCTAGA
TTTCTGCCTCGGAGCGGTAACGGCTACTTTGCGGCGGCGTACGGCGGCGTATCGGCGGCTTCAGGGCGGTGGATGTTTGGGAATTCGGGTGAAGGGTGTAAATTGGGAGG
TGAAAAGGGATCATCAACAGATCATGTGGGTGTTGTTGATCTTCATCTTAAACTTTCTCCATCTGGTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTGTTCGGGTTCCCACTGGTCGAACACGACGACCTTCCGACGGAGACGCCCGACGGCAGCGGCGCCGACCCCAACTC
CGACGACGACAGGAAGTTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCGCACAAGAGAGAGCGCCAAAGGGCCAAAC
GCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGGCGCCGCTTTACTCCAGCGTTTTCTCGGGCAACATTGGCGGCGGCGGTGGTTCTAGA
TTTCTGCCTCGGAGCGGTAACGGCTACTTTGCGGCGGCGTACGGCGGCGTATCGGCGGCTTCAGGGCGGTGGATGTTTGGGAATTCGGGTGAAGGGTGTAAATTGGGAGG
TGAAAAGGGATCATCAACAGATCATGTGGGTGTTGTTGATCTTCATCTTAAACTTTCTCCATCTGGTTCATGA
Protein sequenceShow/hide protein sequence
MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGADPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSVFSGNIGGGGGSR
FLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSGS