; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002671 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002671
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionnifU-like protein 1, chloroplastic
Genome locationchr4:44694370..44694717
RNA-Seq ExpressionLag0002671
SyntenyLag0002671
Gene Ontology termsGO:0016226 - iron-sulfur cluster assembly (biological process)
GO:0097428 - protein maturation by iron-sulfur cluster transfer (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR001075 - NIF system FeS cluster assembly, NifU, C-terminal
IPR034904 - Fe-S cluster assembly domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046713.1 nifU-like protein 1 [Cucumis melo var. makuwa]1.1e-4085.84Show/hide
Query:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLTTSGLLKTP       ANY QYPP AY QHQ  +SLKRAFP RA+RAS SNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG
        SVEDGVVSLKLVG
Subjt:  SVEDGVVSLKLVG

KAE8646369.1 hypothetical protein Csa_016477 [Cucumis sativus]3.7e-4184.03Show/hide
Query:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLTTSGLLKTP       AN  QYPP AY QHQ  +SLKRAFP RAIRAS SNSGPST+SSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG-GWISH
        SVEDGVVSLKLVG GW SH
Subjt:  SVEDGVVSLKLVG-GWISH

XP_008451442.1 PREDICTED: nifU-like protein 1, chloroplastic [Cucumis melo]1.1e-4085.84Show/hide
Query:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLTTSGLLKTP       ANY QYPP AY QHQ  +SLKRAFP RA+RAS SNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG
        SVEDGVVSLKLVG
Subjt:  SVEDGVVSLKLVG

XP_022144330.1 nifU-like protein 1, chloroplastic [Momordica charantia]1.2e-4287.61Show/hide
Query:  MASLTTSGLLKTPHF-----ANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLTTSGLLKTP       ANYRQYPPSA+RQHQG  SLKR  PRR I+ASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTPHF-----ANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG
        SVEDGVVSLKLVG
Subjt:  SVEDGVVSLKLVG

XP_022991837.1 nifU-like protein 1, chloroplastic [Cucurbita maxima]9.1e-4082.3Show/hide
Query:  MASLTTSGLLKTPHF-----ANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLT SGLLKTP +     AN+RQYPPSA+ QHQ  +SL RA PR++IRASASNSGPSTSSSPGLYSAQKFELTI NVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTPHF-----ANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG
        SVEDG+VSLKLVG
Subjt:  SVEDGVVSLKLVG

TrEMBL top hitse value%identityAlignment
A0A0A0KB98 Uncharacterized protein7.5e-4084.96Show/hide
Query:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLTTSGLLKTP       AN  QYPP AY QHQ  +SLKRAFP RAIRAS SNSGPST+SSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG
        SVEDGVVSLKLVG
Subjt:  SVEDGVVSLKLVG

A0A1S3BQX1 nifU-like protein 1, chloroplastic5.2e-4185.84Show/hide
Query:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLTTSGLLKTP       ANY QYPP AY QHQ  +SLKRAFP RA+RAS SNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG
        SVEDGVVSLKLVG
Subjt:  SVEDGVVSLKLVG

A0A5A7TT28 NifU-like protein 15.2e-4185.84Show/hide
Query:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLTTSGLLKTP       ANY QYPP AY QHQ  +SLKRAFP RA+RAS SNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTP-----HFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG
        SVEDGVVSLKLVG
Subjt:  SVEDGVVSLKLVG

A0A6J1CRB9 nifU-like protein 1, chloroplastic5.6e-4387.61Show/hide
Query:  MASLTTSGLLKTPHF-----ANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLTTSGLLKTP       ANYRQYPPSA+RQHQG  SLKR  PRR I+ASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTPHF-----ANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG
        SVEDGVVSLKLVG
Subjt:  SVEDGVVSLKLVG

A0A6J1JN01 nifU-like protein 1, chloroplastic4.4e-4082.3Show/hide
Query:  MASLTTSGLLKTPHF-----ANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV
        MASLT SGLLKTP +     AN+RQYPPSA+ QHQ  +SL RA PR++IRASASNSGPSTSSSPGLYSAQKFELTI NVDLVLEDVRPYLIADGGNVDVV
Subjt:  MASLTTSGLLKTPHF-----ANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVV

Query:  SVEDGVVSLKLVG
        SVEDG+VSLKLVG
Subjt:  SVEDGVVSLKLVG

SwissProt top hitse value%identityAlignment
Q84LK7 NifU-like protein 1, chloroplastic1.7e-0452.17Show/hide
Query:  SAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVG
        +A +  LT GNV+ VL+ VRPYL ADGG+V +  +   VV LKL G
Subjt:  SAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVG

Q93W77 NifU-like protein 1, chloroplastic7.3e-1662.65Show/hide
Query:  ISLKRAFPRRAIRASASN---SGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVGGWIS
        IS    F R AI  S+     S  ++  S GLYSAQ F+LT  NVDLVLEDVRP+LI+DGGNVDVVSVEDGVVSLKL G   S
Subjt:  ISLKRAFPRRAIRASASN---SGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVGGWIS

Arabidopsis top hitse value%identityAlignment
AT4G01940.1 NFU domain protein 15.2e-1762.65Show/hide
Query:  ISLKRAFPRRAIRASASN---SGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVGGWIS
        IS    F R AI  S+     S  ++  S GLYSAQ F+LT  NVDLVLEDVRP+LI+DGGNVDVVSVEDGVVSLKL G   S
Subjt:  ISLKRAFPRRAIRASASN---SGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVGGWIS

AT4G25910.1 NFU domain protein 36.6e-0455Show/hide
Query:  LTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVG
        LT  NV+ VL++VRP L+ADGGNV +  ++  VV LKL G
Subjt:  LTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVG

AT5G49940.1 NIFU-like protein 21.3e-0447.5Show/hide
Query:  LTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVG
        LT  NV+ VL+++RPYL++DGGNV +  ++  +V +KL G
Subjt:  LTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVG

AT5G49940.2 NIFU-like protein 21.3e-0447.5Show/hide
Query:  LTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVG
        LT  NV+ VL+++RPYL++DGGNV +  ++  +V +KL G
Subjt:  LTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTTTAACTACCTCCGGCCTGCTCAAAACCCCTCACTTTGCAAATTATCGCCAATACCCACCTTCTGCTTATCGGCAACATCAAGGATCCATTTCCCTGAAAAG
GGCTTTTCCCAGAAGAGCCATTAGAGCTTCAGCTTCGAATTCGGGTCCATCCACAAGCTCGTCGCCAGGGTTGTACTCAGCCCAGAAATTTGAACTGACCATTGGAAACG
TGGACTTGGTTCTCGAGGATGTGAGGCCATATCTAATCGCCGATGGAGGAAATGTCGATGTTGTATCTGTCGAGGACGGTGTGGTTTCTCTCAAACTCGTTGGTGGGTGG
ATTTCTCATCTCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTTTAACTACCTCCGGCCTGCTCAAAACCCCTCACTTTGCAAATTATCGCCAATACCCACCTTCTGCTTATCGGCAACATCAAGGATCCATTTCCCTGAAAAG
GGCTTTTCCCAGAAGAGCCATTAGAGCTTCAGCTTCGAATTCGGGTCCATCCACAAGCTCGTCGCCAGGGTTGTACTCAGCCCAGAAATTTGAACTGACCATTGGAAACG
TGGACTTGGTTCTCGAGGATGTGAGGCCATATCTAATCGCCGATGGAGGAAATGTCGATGTTGTATCTGTCGAGGACGGTGTGGTTTCTCTCAAACTCGTTGGTGGGTGG
ATTTCTCATCTCATTTAA
Protein sequenceShow/hide protein sequence
MASLTTSGLLKTPHFANYRQYPPSAYRQHQGSISLKRAFPRRAIRASASNSGPSTSSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVGGW
ISHLI