; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002672 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002672
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionnifU-like protein 1, chloroplastic
Genome locationchr4:44696000..44698265
RNA-Seq ExpressionLag0002672
SyntenyLag0002672
Gene Ontology termsGO:0016226 - iron-sulfur cluster assembly (biological process)
GO:0097428 - protein maturation by iron-sulfur cluster transfer (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR001075 - NIF system FeS cluster assembly, NifU, C-terminal
IPR034904 - Fe-S cluster assembly domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046713.1 nifU-like protein 1 [Cucumis melo var. makuwa]6.0e-5396.33Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVN+HLDILRPAIRNYGGSVEVISINGG CLVKYEGPESIGTG+KAAIKERFP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFSS
        DITNVVFSS
Subjt:  DITNVVFSS

XP_004135981.1 nifU-like protein 1, chloroplastic [Cucumis sativus]2.7e-5397.25Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGG CLVKYEGPESIGTG+KAAIKERFP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFSS
        DITNVVFSS
Subjt:  DITNVVFSS

XP_008451442.1 PREDICTED: nifU-like protein 1, chloroplastic [Cucumis melo]4.6e-5396.33Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVN+HLDILRPAIRNYGGSVEVISINGG CLVKYEGPESIGTG+KAAIKERFP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFSS
        DITNVVFSS
Subjt:  DITNVVFSS

XP_022144330.1 nifU-like protein 1, chloroplastic [Momordica charantia]3.0e-5296.3Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLD+LRPAIRNYGGSVEVISI+GG CLVKYEGPESIGTGIKAAIKERFP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFS
        DITNVVFS
Subjt:  DITNVVFS

XP_038898528.1 nifU-like protein 1, chloroplastic [Benincasa hispida]1.9e-5195.37Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDE PKETTPEAVNSHLDILRPAIRNYGGSVEVISINGG CLVKYEGPESIGTG+KAAIKERFP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFS
        DIT+VVFS
Subjt:  DITNVVFS

TrEMBL top hitse value%identityAlignment
A0A0A0KB98 Uncharacterized protein1.3e-5397.25Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGG CLVKYEGPESIGTG+KAAIKERFP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFSS
        DITNVVFSS
Subjt:  DITNVVFSS

A0A1S3BQX1 nifU-like protein 1, chloroplastic2.2e-5396.33Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVN+HLDILRPAIRNYGGSVEVISINGG CLVKYEGPESIGTG+KAAIKERFP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFSS
        DITNVVFSS
Subjt:  DITNVVFSS

A0A5A7TT28 NifU-like protein 12.9e-5396.33Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVN+HLDILRPAIRNYGGSVEVISINGG CLVKYEGPESIGTG+KAAIKERFP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFSS
        DITNVVFSS
Subjt:  DITNVVFSS

A0A6J1CRB9 nifU-like protein 1, chloroplastic1.4e-5296.3Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLD+LRPAIRNYGGSVEVISI+GG CLVKYEGPESIGTGIKAAIKERFP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFS
        DITNVVFS
Subjt:  DITNVVFS

A0A6J1GMI1 nifU-like protein 1, chloroplastic6.0e-5193.58Show/hide
Query:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP
        +GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKE T EAVNSHLDILRPAIRNYGGSVEVISI+GG C+VKYEGPESIGTGIKAAIKE+FP
Subjt:  IGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFP

Query:  DITNVVFSS
        DITNVVFSS
Subjt:  DITNVVFSS

SwissProt top hitse value%identityAlignment
Q84LK7 NifU-like protein 1, chloroplastic2.3e-0737.38Show/hide
Query:  GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEP-KETTPEAVNSHLDILRPAIRNY-GGSVEVISINGGGCLVKYEGPESIGTGIKAAI----
        GACGSCPSS  T+K GIER L EK  D V  +  V D+E   E   E V   L+ +RP +    GG ++ + I G    V+  GP ++   ++ A+    
Subjt:  GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEP-KETTPEAVNSHLDILRPAIRNY-GGSVEVISINGGGCLVKYEGPESIGTGIKAAI----

Query:  KERFPDI
        +E+ P I
Subjt:  KERFPDI

Q84RQ7 NifU-like protein 3, chloroplastic1.5e-0631.03Show/hide
Query:  MLLTEKKVSLNVEKAMSEIFSLSLLDILQQACKEKAEI-------GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEP--KETTPEAVNSHLD
        M LTE+    NVE+ + E+    + D    A  E   +       GACGSCPSS+ T+KMGIE  L++K  + +  + Q  + E    E   E +   L 
Subjt:  MLLTEKKVSLNVEKAMSEIFSLSLLDILQQACKEKAEI-------GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEP--KETTPEAVNSHLD

Query:  ILRPAIRNY-GGSVEVISINGGGCLVKYEGPESIGTGIKAAIKER
         LRP +    GG +E++ I+G    V+  GP +    ++ A+ ++
Subjt:  ILRPAIRNY-GGSVEVISINGGGCLVKYEGPESIGTGIKAAIKER

Q93W20 NifU-like protein 2, chloroplastic1.4e-0928.79Show/hide
Query:  QRLFVVLSDAMKPIQRG---FLGHGIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEK----AMSEIFSLSLLDILQQACKEKAEIGACGSCPSSTT
        QR   +++    P++RG   FL       F R ++    ++    L++ LTE+ V   +++     MS+  +++L +I     + K + GACGSCPSST 
Subjt:  QRLFVVLSDAMKPIQRG---FLGHGIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEK----AMSEIFSLSLLDILQQACKEKAEIGACGSCPSSTT

Query:  TMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRP-AIRNYGGSVEVISINGGGCLVKYEGPE----SIGTGIKAAIKERFPDITNV
        TMKMGIER L EK  + V       +E   E   E +   L+ +RP  I    GS++++ I      ++  GP     ++   +   ++E+ P I  V
Subjt:  TMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRP-AIRNYGGSVEVISINGGGCLVKYEGPE----SIGTGIKAAIKERFPDITNV

Q93W77 NifU-like protein 1, chloroplastic2.7e-4048.47Show/hide
Query:  FVVLSDAMKPIQRGFLGH--GIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEKAMSEIFSLSLLD-------ILQQACKEKAEIGACGSCPSSTTT
        FV+ ++  + I R  + H   I G+    +I+   S  +S L    T      NV+  + ++    + D        ++         GAC SCPSS+TT
Subjt:  FVVLSDAMKPIQRGFLGH--GIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEKAMSEIFSLSLLD-------ILQQACKEKAEIGACGSCPSSTTT

Query:  MKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFPDITNVVFSS
        M MGIERVLKEKFGD++K+I QV+DEE K+ T EAVN+HLDILRPAI+NYGGSVEV+S+ G  C+VKY GPESIG GI+AAIKE+F DI+NV F+S
Subjt:  MKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFPDITNVVFSS

Arabidopsis top hitse value%identityAlignment
AT4G01940.1 NFU domain protein 11.9e-4148.47Show/hide
Query:  FVVLSDAMKPIQRGFLGH--GIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEKAMSEIFSLSLLD-------ILQQACKEKAEIGACGSCPSSTTT
        FV+ ++  + I R  + H   I G+    +I+   S  +S L    T      NV+  + ++    + D        ++         GAC SCPSS+TT
Subjt:  FVVLSDAMKPIQRGFLGH--GIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEKAMSEIFSLSLLD-------ILQQACKEKAEIGACGSCPSSTTT

Query:  MKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFPDITNVVFSS
        M MGIERVLKEKFGD++K+I QV+DEE K+ T EAVN+HLDILRPAI+NYGGSVEV+S+ G  C+VKY GPESIG GI+AAIKE+F DI+NV F+S
Subjt:  MKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFPDITNVVFSS

AT4G25910.1 NFU domain protein 31.1e-0731.03Show/hide
Query:  MLLTEKKVSLNVEKAMSEIFSLSLLDILQQACKEKAEI-------GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEP--KETTPEAVNSHLD
        M LTE+    NVE+ + E+    + D    A  E   +       GACGSCPSS+ T+KMGIE  L++K  + +  + Q  + E    E   E +   L 
Subjt:  MLLTEKKVSLNVEKAMSEIFSLSLLDILQQACKEKAEI-------GACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEP--KETTPEAVNSHLD

Query:  ILRPAIRNY-GGSVEVISINGGGCLVKYEGPESIGTGIKAAIKER
         LRP +    GG +E++ I+G    V+  GP +    ++ A+ ++
Subjt:  ILRPAIRNY-GGSVEVISINGGGCLVKYEGPESIGTGIKAAIKER

AT5G49940.1 NIFU-like protein 21.0e-1028.79Show/hide
Query:  QRLFVVLSDAMKPIQRG---FLGHGIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEK----AMSEIFSLSLLDILQQACKEKAEIGACGSCPSSTT
        QR   +++    P++RG   FL       F R ++    ++    L++ LTE+ V   +++     MS+  +++L +I     + K + GACGSCPSST 
Subjt:  QRLFVVLSDAMKPIQRG---FLGHGIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEK----AMSEIFSLSLLDILQQACKEKAEIGACGSCPSSTT

Query:  TMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRP-AIRNYGGSVEVISINGGGCLVKYEGPE----SIGTGIKAAIKERFPDITNV
        TMKMGIER L EK  + V       +E   E   E +   L+ +RP  I    GS++++ I      ++  GP     ++   +   ++E+ P I  V
Subjt:  TMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRP-AIRNYGGSVEVISINGGGCLVKYEGPE----SIGTGIKAAIKERFPDITNV

AT5G49940.2 NIFU-like protein 22.0e-0634.75Show/hide
Query:  QRLFVVLSDAMKPIQRG---FLGHGIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEK----AMSEIFSLSLLDILQQACKEKAEIGACGSCPSSTT
        QR   +++    P++RG   FL       F R ++    ++    L++ LTE+ V   +++     MS+  +++L +I     + K + GACGSCPSST 
Subjt:  QRLFVVLSDAMKPIQRG---FLGHGIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEK----AMSEIFSLSLLDILQQACKEKAEIGACGSCPSSTT

Query:  TMKMGIERVLKEKFGDSV
        TMKMGIER L EK  + V
Subjt:  TMKMGIERVLKEKFGDSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTTCTCAACTAGCAACGTTGAAACTGATTAGATCCCGTATCTCCTTCAAGCTATTGATCCAAAGACTTTTTGTTGTATTGTCTGATGCTATGAAGCCAATTCA
AAGGGGTTTCCTAGGACATGGCATTGGTGGAGCTTTTATGAGGTTACAGATTGCAGATCAATGTAGCTCTTCGGCATCTTACCTGCAAATGCTTTTGACCGAAAAAAAAG
TCTCCTTGAATGTGGAAAAGGCAATGAGTGAGATATTCTCATTGTCTTTGTTAGACATCTTGCAGCAGGCATGCAAAGAAAAGGCTGAGATAGGAGCATGCGGTAGCTGC
CCTAGTTCAACAACCACCATGAAAATGGGAATTGAACGGGTATTGAAGGAAAAGTTTGGAGATTCAGTGAAGGAAATATGCCAAGTATATGATGAAGAGCCAAAGGAGAC
AACACCTGAGGCAGTAAATAGTCACCTTGACATATTGAGGCCAGCCATAAGGAACTACGGTGGGAGCGTGGAAGTAATATCGATCAACGGTGGTGGTTGCCTTGTGAAGT
ATGAGGGTCCTGAATCTATTGGTACAGGAATTAAAGCAGCCATTAAGGAGAGATTCCCAGACATTACCAACGTTGTGTTTTCAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTTCTCAACTAGCAACGTTGAAACTGATTAGATCCCGTATCTCCTTCAAGCTATTGATCCAAAGACTTTTTGTTGTATTGTCTGATGCTATGAAGCCAATTCA
AAGGGGTTTCCTAGGACATGGCATTGGTGGAGCTTTTATGAGGTTACAGATTGCAGATCAATGTAGCTCTTCGGCATCTTACCTGCAAATGCTTTTGACCGAAAAAAAAG
TCTCCTTGAATGTGGAAAAGGCAATGAGTGAGATATTCTCATTGTCTTTGTTAGACATCTTGCAGCAGGCATGCAAAGAAAAGGCTGAGATAGGAGCATGCGGTAGCTGC
CCTAGTTCAACAACCACCATGAAAATGGGAATTGAACGGGTATTGAAGGAAAAGTTTGGAGATTCAGTGAAGGAAATATGCCAAGTATATGATGAAGAGCCAAAGGAGAC
AACACCTGAGGCAGTAAATAGTCACCTTGACATATTGAGGCCAGCCATAAGGAACTACGGTGGGAGCGTGGAAGTAATATCGATCAACGGTGGTGGTTGCCTTGTGAAGT
ATGAGGGTCCTGAATCTATTGGTACAGGAATTAAAGCAGCCATTAAGGAGAGATTCCCAGACATTACCAACGTTGTGTTTTCAAGCTAG
Protein sequenceShow/hide protein sequence
MDASQLATLKLIRSRISFKLLIQRLFVVLSDAMKPIQRGFLGHGIGGAFMRLQIADQCSSSASYLQMLLTEKKVSLNVEKAMSEIFSLSLLDILQQACKEKAEIGACGSC
PSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEVISINGGGCLVKYEGPESIGTGIKAAIKERFPDITNVVFSS