; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002687 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002687
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr4:44839562..44839918
RNA-Seq ExpressionLag0002687
SyntenyLag0002687
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053143.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]7.5e-1340.66Show/hide
Query:  STPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS
        S  KL ++N+L+WKFQ+L  L  + L+ F + + + P K+LTST  S  S+T+  NPEY+ W   + LI+ W LGS+S  I+ +++ C+S+
Subjt:  STPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS

KAA0067213.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]1.5e-1341.05Show/hide
Query:  SKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS
        S   S  KL ++N+L+WKFQ+L  L  + L+ F++ + + P K+L ST  S  S+T+  NP Y+ W  QD LI++W LGS+S  I+ ++L C+S+
Subjt:  SKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS

TYK18917.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]1.5e-1341.05Show/hide
Query:  SKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS
        S   S  KL ++N+L+WKFQ+L  L  + L+ F++ + + P K+L ST  S  S+T+  NP Y+ W  QD LI++W LGS+S  I+ ++L C+S+
Subjt:  SKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS

XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia]5.9e-1847.52Show/hide
Query:  KFVNPGSKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFL-TSTDESSSTKI-SNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQS
        K +NPGSK  S  +L+++N L+WKFQ+   L+G+GL+ +ID + D P +F+ T+ DESSS+ +  NP Y  WI QD LI+AW LGS++  I++++LDC+S
Subjt:  KFVNPGSKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFL-TSTDESSSTKI-SNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQS

Query:  S
        +
Subjt:  S

XP_022159146.1 uncharacterized protein LOC111025572 [Momordica charantia]7.5e-2150.52Show/hide
Query:  VNPGSKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDESSSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS
        VNPG+K  ST KL++EN+L+W+ Q+   L+GHGL KFIDP+  +P +F+ S DESSS    NPE+  W  QD LIT+W LGS+S  I++++L+C+++
Subjt:  VNPGSKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDESSSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS

TrEMBL top hitse value%identityAlignment
A0A5A7UB21 Keratin, type II cytoskeletal 1-like3.6e-1340.66Show/hide
Query:  STPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS
        S  KL ++N+L+WKFQ+L  L  + L+ F + + + P K+LTST  S  S+T+  NPEY+ W   + LI+ W LGS+S  I+ +++ C+S+
Subjt:  STPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS

A0A5A7VGJ8 Keratin, type II cytoskeletal 1-like7.3e-1441.05Show/hide
Query:  SKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS
        S   S  KL ++N+L+WKFQ+L  L  + L+ F++ + + P K+L ST  S  S+T+  NP Y+ W  QD LI++W LGS+S  I+ ++L C+S+
Subjt:  SKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS

A0A5D3D5T2 Keratin, type II cytoskeletal 1-like7.3e-1441.05Show/hide
Query:  SKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS
        S   S  KL ++N+L+WKFQ+L  L  + L+ F++ + + P K+L ST  S  S+T+  NP Y+ W  QD LI++W LGS+S  I+ ++L C+S+
Subjt:  SKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDES--SSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS

A0A6J1DLT9 uncharacterized protein LOC1110217572.9e-1847.52Show/hide
Query:  KFVNPGSKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFL-TSTDESSSTKI-SNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQS
        K +NPGSK  S  +L+++N L+WKFQ+   L+G+GL+ +ID + D P +F+ T+ DESSS+ +  NP Y  WI QD LI+AW LGS++  I++++LDC+S
Subjt:  KFVNPGSKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFL-TSTDESSSTKI-SNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQS

Query:  S
        +
Subjt:  S

A0A6J1E314 uncharacterized protein LOC1110255723.6e-2150.52Show/hide
Query:  VNPGSKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDESSSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS
        VNPG+K  ST KL++EN+L+W+ Q+   L+GHGL KFIDP+  +P +F+ S DESSS    NPE+  W  QD LIT+W LGS+S  I++++L+C+++
Subjt:  VNPGSKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDESSSTKISNPEYEYWIPQDSLITAWFLGSISPAIVAELLDCQSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATTCAACTTTTGAAAGACAAACTTTAGAAATTATCACACCTCCAGAGCCAAAGTTCGTGAATCCTGGAAGCAAAACTGCCTCAACACCCAAATTGGATGAAGA
GAATTATTTGATGTGGAAATTTCAAGTCCTAATCACACTGAGAGGCCATGGATTGCAGAAATTCATCGATCCTGATTATGATGTTCCAAGAAAATTTCTGACTTCTACTG
ATGAATCTTCTTCAACAAAGATTTCCAATCCCGAATATGAGTATTGGATTCCTCAAGATAGTTTAATCACCGCCTGGTTTCTTGGTTCGATATCACCGGCCATTGTTGCA
GAGTTACTCGATTGTCAATCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGATTCAACTTTTGAAAGACAAACTTTAGAAATTATCACACCTCCAGAGCCAAAGTTCGTGAATCCTGGAAGCAAAACTGCCTCAACACCCAAATTGGATGAAGA
GAATTATTTGATGTGGAAATTTCAAGTCCTAATCACACTGAGAGGCCATGGATTGCAGAAATTCATCGATCCTGATTATGATGTTCCAAGAAAATTTCTGACTTCTACTG
ATGAATCTTCTTCAACAAAGATTTCCAATCCCGAATATGAGTATTGGATTCCTCAAGATAGTTTAATCACCGCCTGGTTTCTTGGTTCGATATCACCGGCCATTGTTGCA
GAGTTACTCGATTGTCAATCTTCTTGA
Protein sequenceShow/hide protein sequence
MGDSTFERQTLEIITPPEPKFVNPGSKTASTPKLDEENYLMWKFQVLITLRGHGLQKFIDPDYDVPRKFLTSTDESSSTKISNPEYEYWIPQDSLITAWFLGSISPAIVA
ELLDCQSS