; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002721 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002721
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:45097903..45104012
RNA-Seq ExpressionLag0002721
SyntenyLag0002721
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021847414.1 uncharacterized protein LOC110787151 [Spinacia oleracea]1.2e-2833.93Show/hide
Query:  EVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCR
        +VF WR C E LPT   LS R      VC +C    ES +H   +CK  R I   S +E +L + Q  S+++        +D    EE + + WAVW  R
Subjt:  EVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCR

Query:  NQQKFRG-RAPSAGLVDWAANYLAVFR--GASRTYGEGVGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSD
        N+    G  +     V +A       R  G   + G   GG    AV W+ PE GWYK NVDA   G++  +G G V+RD+ G V+  A        +++
Subjt:  NQQKFRG-RAPSAGLVDWAANYLAVFR--GASRTYGEGVGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSD

Query:  LAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHELA
        +AE  AV+ GM L  E+G  RV++E+D   V   L+  A    SE  ++V +     S  +   ++F +R GN+VAH+LA
Subjt:  LAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHELA

XP_022139684.1 uncharacterized protein LOC111010533 [Momordica charantia]1.8e-2936.56Show/hide
Query:  MLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQKF-RGRAPSAGLVDWAANYLAVFRGASRTYGEGVGGVPRS------------AVSWTPPEVGWYKA
        M+N+LRD +D ++W  FEELVV LW++W  RN   F + R     L  W + Y+A F+  +  +      V +S               W P E G +K 
Subjt:  MLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQKF-RGRAPSAGLVDWAANYLAVFRGASRTYGEGVGGVPRS------------AVSWTPPEVGWYKA

Query:  NVDAAFCGDLSRAGAGV-VVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVS
          DA+F      AG GV ++RD  G+V+ SA    +HV S D AE LA V+G+R+ +E G + ++LETDS R+++L        LS+ G ++   +  ++
Subjt:  NVDAAFCGDLSRAGAGV-VVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVS

Query:  THMQFRYNFTRREGNRVAHELARFALR
        T +Q  Y+FT+R GN +AH LAR AL+
Subjt:  THMQFRYNFTRREGNRVAHELARFALR

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.8e-4236.07Show/hide
Query:  QVRCDW-----ILIGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVD
        +VRC W     + I    +VF WRLCL+RLPT   LS RGV++ N C  CG +GE  +H+FW CKF   + + S++  L       S   +LR+  + + 
Subjt:  QVRCDW-----ILIGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVD

Query:  WAKFEELVVVLWAVWCCRNQQKFRGRAPSA-----GLVDWAANYLAVFRGASRTYGEGVGGVPRSA-VSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVR
         A FEEL VV+W +W  RN + F     +       LV+WA  Y   FR A        G V  +A + W PP+ G YK N DA+F      AG G+++ 
Subjt:  WAKFEELVVVLWAVWCCRNQQKFRGRAPSA-----GLVDWAANYLAVFRGASRTYGEGVGGVPRSA-VSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVR

Query:  DEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHEL
        ++ G+VM +A    +++ S D+AE +A V+G++L  E+G                   PA+ DLSE G +V +A+   +  +   +NF +REGN+ AH L
Subjt:  DEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHEL

Query:  ARFAL
        AR AL
Subjt:  ARFAL

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]4.7e-3040.08Show/hide
Query:  MHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQ--QKFRGRAPSAGLVDWAANYLAVFRGASRTYGEG--
        M   WQC  F   L       LL     + M + +R   D V W     +VV+LWA+W  RNQ  Q F      + LV W+ NYL V++ A R+      
Subjt:  MHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQ--QKFRGRAPSAGLVDWAANYLAVFRGASRTYGEG--

Query:  VGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDP
        V   PR A+ W PP     K NVDAAF  +   AG GV++RD  G V L+A          D  EG AV +G+ L VE GF R  +ETDS R+F+LL   
Subjt:  VGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDP

Query:  AMVDLSEVGVLVSEARREVSTHMQ-FRYNFTRREGNRVAHELARFAL
          VD SEVGVL S  +  +S+H +   ++FT R GN  AH LA+ AL
Subjt:  AMVDLSEVGVLVSEARREVSTHMQ-FRYNFTRREGNRVAHELARFAL

XP_030939716.1 uncharacterized protein LOC115964569 [Quercus lobata]2.3e-2933.64Show/hide
Query:  VMFGANWNDQNGRYHGKPIIEDLQVRCDWIL-IGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQ
        V+ G    + +  Y GK I   L     W L I    EVF WR C E LPT   LS R +    +C++C    ES +H  W+C   R++  GS   +   
Subjt:  VMFGANWNDQNGRYHGKPIIEDLQVRCDWIL-IGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQ

Query:  NIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQKFRGRAPSAG-LVDWAANYLAVFRGASRTYGEGVGGVPRSAVSWTPPEVGWYKANVDAAF
              ML L+  + +RV+    + ++V  W +W  RN+    G+    G L + A  +L  FR AS   G   GG   S  +W PP    +K N DA  
Subjt:  NIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQKFRGRAPSAG-LVDWAANYLAVFRGASRTYGEGVGGVPRSAVSWTPPEVGWYKANVDAAF

Query:  CGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS---RRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQ
           L+ +G G V+R+E G VM + A     V  S+ A+ LA    +  VV+ GF  +I+E D+    +  S+LQD    D S +G ++ +    V     
Subjt:  CGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS---RRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQ

Query:  FRYNFTRREGNRVAHELARFA
         R   TRR GNRVAHELA+FA
Subjt:  FRYNFTRREGNRVAHELARFA

TrEMBL top hitse value%identityAlignment
A0A2N9G1T0 Uncharacterized protein4.4e-2630.36Show/hide
Query:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQ
        F WRLC   LPT D L  R +     C +C +  E+  H+F QC + R++L G +  V++Q+   + M++ L  +         + +  V W +W   N 
Subjt:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQ

Query:  QKFRG--RAPSAGLVDWAANYLAVFRGASRTYGEGVGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAE
          FR   + P+    D A  Y+  F  A+           R  + WTP   GWYK N+D A   +L + G GVV+R++ G  + + +   D+   +  AE
Subjt:  QKFRG--RAPSAGLVDWAANYLAVFRGASRTYGEGVGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAE

Query:  GLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHELARFA
         LA +  +    E+    +I E D  +V   LQ     D + VG + S A+ ++S    F      REGN VAH LA+FA
Subjt:  GLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHELARFA

A0A2N9I7P8 Uncharacterized protein2.2e-2528.53Show/hide
Query:  ADRIMFLAGSLSQEEFERVCVMFGANWNDQNGRYHGKP-IIEDLQVRCDWILIGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVF
        AD++ +  G+++ E   R    F  +  D+N     +P  ++D+      + I    ++F W+   E LPT   L  R + V  +C +CG   E  +H  
Subjt:  ADRIMFLAGSLSQEEFERVCVMFGANWNDQNGRYHGKP-IIEDLQVRCDWILIGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVF

Query:  WQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQKFRGRA-PSAGLVDWAANYLAVFRGASRTYGEGVGGVPRS
        W     + +     W    +NI A    +LL  V      ++ E  +++ WA+W  RN+ +      P   +   A  YL  +   +      V   P  
Subjt:  WQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQKFRGRA-PSAGLVDWAANYLAVFRGASRTYGEGVGGVPRS

Query:  AVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVM--LSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDL
        AV W PP    YK N D A   + + AG GV+VRD +G VM  L+  V   H+  S   E  AV   ++  +E+G A    E DS+ + + L  P    L
Subjt:  AVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVM--LSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDL

Query:  SEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHELARFA
        +  G+L+++A+   S    F ++  +REGNR+AH LAR A
Subjt:  SEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHELARFA

A0A6J1CDQ4 uncharacterized protein LOC1110105338.7e-3036.56Show/hide
Query:  MLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQKF-RGRAPSAGLVDWAANYLAVFRGASRTYGEGVGGVPRS------------AVSWTPPEVGWYKA
        M+N+LRD +D ++W  FEELVV LW++W  RN   F + R     L  W + Y+A F+  +  +      V +S               W P E G +K 
Subjt:  MLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQKF-RGRAPSAGLVDWAANYLAVFRGASRTYGEGVGGVPRS------------AVSWTPPEVGWYKA

Query:  NVDAAFCGDLSRAGAGV-VVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVS
          DA+F      AG GV ++RD  G+V+ SA    +HV S D AE LA V+G+R+ +E G + ++LETDS R+++L        LS+ G ++   +  ++
Subjt:  NVDAAFCGDLSRAGAGV-VVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVS

Query:  THMQFRYNFTRREGNRVAHELARFALR
        T +Q  Y+FT+R GN +AH LAR AL+
Subjt:  THMQFRYNFTRREGNRVAHELARFALR

A0A6J1DAR4 uncharacterized protein LOC1110189548.9e-4336.07Show/hide
Query:  QVRCDW-----ILIGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVD
        +VRC W     + I    +VF WRLCL+RLPT   LS RGV++ N C  CG +GE  +H+FW CKF   + + S++  L       S   +LR+  + + 
Subjt:  QVRCDW-----ILIGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVD

Query:  WAKFEELVVVLWAVWCCRNQQKFRGRAPSA-----GLVDWAANYLAVFRGASRTYGEGVGGVPRSA-VSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVR
         A FEEL VV+W +W  RN + F     +       LV+WA  Y   FR A        G V  +A + W PP+ G YK N DA+F      AG G+++ 
Subjt:  WAKFEELVVVLWAVWCCRNQQKFRGRAPSA-----GLVDWAANYLAVFRGASRTYGEGVGGVPRSA-VSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVR

Query:  DEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHEL
        ++ G+VM +A    +++ S D+AE +A V+G++L  E+G                   PA+ DLSE G +V +A+   +  +   +NF +REGN+ AH L
Subjt:  DEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHEL

Query:  ARFAL
        AR AL
Subjt:  ARFAL

A0A6J1DBJ7 uncharacterized protein LOC1110189732.3e-3040.08Show/hide
Query:  MHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQ--QKFRGRAPSAGLVDWAANYLAVFRGASRTYGEG--
        M   WQC  F   L       LL     + M + +R   D V W     +VV+LWA+W  RNQ  Q F      + LV W+ NYL V++ A R+      
Subjt:  MHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQ--QKFRGRAPSAGLVDWAANYLAVFRGASRTYGEG--

Query:  VGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDP
        V   PR A+ W PP     K NVDAAF  +   AG GV++RD  G V L+A          D  EG AV +G+ L VE GF R  +ETDS R+F+LL   
Subjt:  VGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDP

Query:  AMVDLSEVGVLVSEARREVSTHMQ-FRYNFTRREGNRVAHELARFAL
          VD SEVGVL S  +  +S+H +   ++FT R GN  AH LA+ AL
Subjt:  AMVDLSEVGVLVSEARREVSTHMQ-FRYNFTRREGNRVAHELARFAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.7e-0440.91Show/hide
Query:  WRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKF
        W +   RL T D+L + G+ +  VC+LC  H ES  H+F++C F
Subjt:  WRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKF

AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.3e-0525Show/hide
Query:  WTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGV
        W  P     K N DA F      + A  ++R+  G      ++  D+  +   AE  A++  ++     G+ RVI+E D   + +L+   +    + +  
Subjt:  WTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGV

Query:  LVSEARREVSTHMQFRYNFTRREGNRVAHELARFALREGC
        L+ + R         +++F RR GN+VAHELA+      C
Subjt:  LVSEARREVSTHMQFRYNFTRREGNRVAHELARFALREGC

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-0925.09Show/hide
Query:  CVLCGWHGESCMHVFWQCKFFREILLGS--------EWEVLLQNIQANS--MLNL------LRDVKDRVDWAKFEELVVVLWAVWCCRNQQKFRGRAPSA
        CV C    E+  H+ ++C F R +   S        EW     ++ AN   +LNL      L  + + V W        +LW +W  RN+  F+G+   A
Subjt:  CVLCGWHGESCMHVFWQCKFFREILLGS--------EWEVLLQNIQANS--MLNL------LRDVKDRVDWAKFEELVVVLWAVWCCRNQQKFRGRAPSA

Query:  GLVDWAANYLAVF-RGASRTYGEGVGGVPR----SAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDG
          V      +  F   ++R   EG    P+     +V W  P   W K N DA +  +  R G G ++R+E G V+   A +     +   AE  A+   
Subjt:  GLVDWAANYLAVF-RGASRTYGEGVGGVPR----SAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDG

Query:  MRLVVEMGFARVILETDSRRVFSLLQ--------DPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHELAR
        +  +    + R+I E+D++ + +LL          PA+ D+ ++          +    + ++ FT R GN+VA  +AR
Subjt:  MRLVVEMGFARVILETDSRRVFSLLQ--------DPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHELAR

AT3G09510.1 Ribonuclease H-like superfamily protein3.5e-1522.88Show/hide
Query:  DLQVRCDWILIGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQAN----SMLNLLRDVKDRV
        DL+ R   + I    + F WR   + L T ++L+ RG+ +   C  C    ES  H  + C F       S+  ++   + +N    ++ N+L  V+D  
Subjt:  DLQVRCDWILIGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQAN----SMLNLLRDVKDRV

Query:  DWAKFEELVVV--LWAVWCCRNQ---QKFRGRAPSAGLVDWAA---NYLAVFRGASRTYGEGVGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGV
          + F +L+ V  +W +W  RN     KFR  +PS  ++   A   ++L   +   +T       +  + + W  P   + K N DA F      A  G 
Subjt:  DWAKFEELVVV--LWAVWCCRNQ---QKFRGRAPSAGLVDWAA---NYLAVFRGASRTYGEGVGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGV

Query:  VVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVA
        ++R+  G  +   ++   H  +   AE  A++  ++     G+ +V +E D + + +L+   +    S +   + +     +     ++ F RR+GN++A
Subjt:  VVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVA

Query:  HELARF
        H LA++
Subjt:  HELARF

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.8e-0423.42Show/hide
Query:  WRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVL--------WAV
        W +   RL T D+L   G+ +   C+LC  H +S  H+F++C+F      G  W     +   N    L+  +   +  ++ + + +++        +A+
Subjt:  WRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVL--------WAV

Query:  WCCRNQQKFRG
        W  RNQ+   G
Subjt:  WCCRNQQKFRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTTTACCTACATATTTTTGTCTGTGGAAAAAGAGGTATTGATATATCACTTGTTTGTAAGTTCTGCTTTAAACAAGAAATTGTGGATCACGCCTTATGTGGATG
TAAGCAAGCTGCAGCAATTTGCAACACTATTTTCCAGCGAACAGATAGAGGTATAGCCATACAAAATAACTTTGCAGATCGAATCATGTTTCTTGCCGGTTCTCTATCTC
AGGAGGAGTTTGAAAGAGTGTGTGTTATGTTCGGGGCAAATTGGAATGATCAAAATGGGCGATACCATGGAAAGCCAATAATTGAGGACTTACAAGTCCGATGTGACTGG
ATACTTATTGGAATGAGTTCAGAGGTTTTCTTTTGGAGGCTTTGTTTGGAGCGATTGCCTACTGTTGACAAGTTGAGTGCTAGGGGCGTTGATGTCTTGAATGTGTGTGT
GCTATGTGGTTGGCATGGGGAGTCATGCATGCATGTGTTCTGGCAATGCAAATTTTTTCGTGAAATATTGTTGGGATCGGAGTGGGAGGTCTTGCTGCAGAATATTCAGG
CAAACTCCATGCTTAATCTGCTTAGGGACGTGAAGGATAGGGTTGACTGGGCTAAGTTTGAAGAGCTTGTGGTGGTGTTGTGGGCTGTGTGGTGTTGCCGAAACCAACAG
AAGTTTAGGGGGCGGGCCCCCTCAGCAGGGCTTGTGGATTGGGCGGCGAACTATTTGGCTGTTTTTCGAGGGGCCTCCCGGACGTATGGCGAGGGTGTTGGAGGGGTGCC
TCGAAGTGCAGTAAGCTGGACCCCGCCGGAGGTGGGGTGGTATAAGGCGAACGTGGATGCTGCATTCTGTGGGGACCTGTCTCGAGCGGGTGCTGGAGTTGTTGTTCGGG
ATGAGGTGGGGCGAGTCATGCTGTCAGCTGCTGTTAGTCATGACCATGTGGGAAGTTCAGATTTGGCAGAGGGCCTAGCGGTGGTGGACGGAATGAGACTTGTGGTGGAG
ATGGGTTTTGCTCGAGTTATCCTTGAGACTGACTCTAGGCGGGTGTTTTCGCTGTTGCAAGATCCTGCGATGGTGGATCTGTCTGAGGTCGGTGTTCTAGTTTCTGAGGC
TCGAAGGGAGGTGTCTACACATATGCAGTTCAGGTACAACTTTACAAGAAGAGAAGGAAACCGGGTTGCCCATGAGCTGGCTCGCTTTGCATTGAGAGAGGGATGCTGTA
GGTGGCGGCGGATGCGTGTCATGGATATGGCTTATGGGTTTGTGTATGTTCTGGCTAAAGGGTGGGTGTGTGCTTGGTTAGTGGATCCTAGGTTGGAGTTGGGATTCCCT
GAACATCGTTTTCCTATGTTTTGCATGTGTCGGTTGTTTGTGCTTTTCATGTGGGGCTTTGTGTCCAGTGTAGGGGGAAGATGGGTGGAGGGTCTTATAAGTCAGTTCTG
GGCTAGTAAGGGCTGCTTTAGGTTTCAATGTGGGAGGTGTGTTTACTTTGAGTTGGGTAATCGAAATCGCTTAATGGTGCATGGTTTGTGGGGAGGCGTGCTGCATAACA
GTTGGTTGATGCCCGTGCTGCTCAAAGAGGCTTGGTGTGGACTGTATGAGGTGCCTGAAGGCGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGTTTACCTACATATTTTTGTCTGTGGAAAAAGAGGTATTGATATATCACTTGTTTGTAAGTTCTGCTTTAAACAAGAAATTGTGGATCACGCCTTATGTGGATG
TAAGCAAGCTGCAGCAATTTGCAACACTATTTTCCAGCGAACAGATAGAGGTATAGCCATACAAAATAACTTTGCAGATCGAATCATGTTTCTTGCCGGTTCTCTATCTC
AGGAGGAGTTTGAAAGAGTGTGTGTTATGTTCGGGGCAAATTGGAATGATCAAAATGGGCGATACCATGGAAAGCCAATAATTGAGGACTTACAAGTCCGATGTGACTGG
ATACTTATTGGAATGAGTTCAGAGGTTTTCTTTTGGAGGCTTTGTTTGGAGCGATTGCCTACTGTTGACAAGTTGAGTGCTAGGGGCGTTGATGTCTTGAATGTGTGTGT
GCTATGTGGTTGGCATGGGGAGTCATGCATGCATGTGTTCTGGCAATGCAAATTTTTTCGTGAAATATTGTTGGGATCGGAGTGGGAGGTCTTGCTGCAGAATATTCAGG
CAAACTCCATGCTTAATCTGCTTAGGGACGTGAAGGATAGGGTTGACTGGGCTAAGTTTGAAGAGCTTGTGGTGGTGTTGTGGGCTGTGTGGTGTTGCCGAAACCAACAG
AAGTTTAGGGGGCGGGCCCCCTCAGCAGGGCTTGTGGATTGGGCGGCGAACTATTTGGCTGTTTTTCGAGGGGCCTCCCGGACGTATGGCGAGGGTGTTGGAGGGGTGCC
TCGAAGTGCAGTAAGCTGGACCCCGCCGGAGGTGGGGTGGTATAAGGCGAACGTGGATGCTGCATTCTGTGGGGACCTGTCTCGAGCGGGTGCTGGAGTTGTTGTTCGGG
ATGAGGTGGGGCGAGTCATGCTGTCAGCTGCTGTTAGTCATGACCATGTGGGAAGTTCAGATTTGGCAGAGGGCCTAGCGGTGGTGGACGGAATGAGACTTGTGGTGGAG
ATGGGTTTTGCTCGAGTTATCCTTGAGACTGACTCTAGGCGGGTGTTTTCGCTGTTGCAAGATCCTGCGATGGTGGATCTGTCTGAGGTCGGTGTTCTAGTTTCTGAGGC
TCGAAGGGAGGTGTCTACACATATGCAGTTCAGGTACAACTTTACAAGAAGAGAAGGAAACCGGGTTGCCCATGAGCTGGCTCGCTTTGCATTGAGAGAGGGATGCTGTA
GGTGGCGGCGGATGCGTGTCATGGATATGGCTTATGGGTTTGTGTATGTTCTGGCTAAAGGGTGGGTGTGTGCTTGGTTAGTGGATCCTAGGTTGGAGTTGGGATTCCCT
GAACATCGTTTTCCTATGTTTTGCATGTGTCGGTTGTTTGTGCTTTTCATGTGGGGCTTTGTGTCCAGTGTAGGGGGAAGATGGGTGGAGGGTCTTATAAGTCAGTTCTG
GGCTAGTAAGGGCTGCTTTAGGTTTCAATGTGGGAGGTGTGTTTACTTTGAGTTGGGTAATCGAAATCGCTTAATGGTGCATGGTTTGTGGGGAGGCGTGCTGCATAACA
GTTGGTTGATGCCCGTGCTGCTCAAAGAGGCTTGGTGTGGACTGTATGAGGTGCCTGAAGGCGGCTGA
Protein sequenceShow/hide protein sequence
MNVYLHIFVCGKRGIDISLVCKFCFKQEIVDHALCGCKQAAAICNTIFQRTDRGIAIQNNFADRIMFLAGSLSQEEFERVCVMFGANWNDQNGRYHGKPIIEDLQVRCDW
ILIGMSSEVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREILLGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQ
KFRGRAPSAGLVDWAANYLAVFRGASRTYGEGVGGVPRSAVSWTPPEVGWYKANVDAAFCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVE
MGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARREVSTHMQFRYNFTRREGNRVAHELARFALREGCCRWRRMRVMDMAYGFVYVLAKGWVCAWLVDPRLELGFP
EHRFPMFCMCRLFVLFMWGFVSSVGGRWVEGLISQFWASKGCFRFQCGRCVYFELGNRNRLMVHGLWGGVLHNSWLMPVLLKEAWCGLYEVPEGG