; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002773 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002773
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr4:45495004..45498372
RNA-Seq ExpressionLag0002773
SyntenyLag0002773
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014245.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]7.4e-15388.1Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ++ DG+KYL+QSTKYSE WW+G GNN IAGEDATKT+SAEYLN TV+SGGTQSQANDENIGKEVQH KYIPFSASPPVGE LDLNSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQYCQMLTS GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNVIS+  R+E INSGANHSTKPV EAGS YM  DENGIKDTL+EE +EFMTQN+QIT AFFNGK N  G+STY SQLADVEGGHLDQPHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPI
        VNGAPQRAIPI
Subjt:  VNGAPQRAIPI

XP_004135933.1 nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus]5.0e-15790.06Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ+VADGAKYLLQSTK+SEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG TQ QANDENIGKEVQH KYIPFS SPPVGEHLDLNSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQYCQMLTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNV+S+  R+EDI+S ANHSTKPVSEA S YM T+E GIK+TLDE+ REFMTQNMQITHAFFNGKSNV GLSTY+SQL DVEGGHLDQPHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPIK
        VNGAPQRAIPIK
Subjt:  VNGAPQRAIPIK

XP_008461297.1 PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo]2.2e-15790.06Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ+VAD AKYLLQS+KYSEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG TQ QANDENIGKEVQH KYIPFS SPPVGEHLDLNSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQYCQMLTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNV+S+  R+EDINSGANHSTKPVSE GS YM T E GIK+TLDE+ RE MTQNMQITHAFFNGKSNV GLSTYNSQL DVEGGHLD PHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPIK
        VNGAPQRAIPIK
Subjt:  VNGAPQRAIPIK

XP_023547827.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo]3.3e-15387.78Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ++ DG+KYL+QSTKYSE WWHG GNNTIAGEDATKT+SA+YLN TV+SGGTQSQANDENIGKEVQH KYIPFS SPPVGE LDLNSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQYCQMLTS GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNVIS+  R+E INSG NHSTKPV+EAGS YM  DENGIKDTL+EE +EFMTQN+QIT AFFNGK N  G+STY SQLADVEGGHLDQPHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPI
        VNGAPQRAIPI
Subjt:  VNGAPQRAIPI

XP_038899773.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]3.3e-15389.71Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ+VADGAKYLLQSTKYSEPWWHG GNNTI GEDA KTSSAEYLNVTVTSG TQSQANDENIGKEVQH KYIPFS SPPVGEHLD NSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQY QMLTSYGPQSTLPH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNVIS+  R+EDINS ANH TKPVS A   Y   DEN IKDTL+ EGRE M  NMQITHAFFNGKSNV GLSTYNSQLADVEGGHLDQPHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPI
        VNGAPQRAIPI
Subjt:  VNGAPQRAIPI

TrEMBL top hitse value%identityAlignment
A0A0A0K612 Nuclear transcription factor Y subunit2.4e-15790.06Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ+VADGAKYLLQSTK+SEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG TQ QANDENIGKEVQH KYIPFS SPPVGEHLDLNSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQYCQMLTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNV+S+  R+EDI+S ANHSTKPVSEA S YM T+E GIK+TLDE+ REFMTQNMQITHAFFNGKSNV GLSTY+SQL DVEGGHLDQPHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPIK
        VNGAPQRAIPIK
Subjt:  VNGAPQRAIPIK

A0A1S3CED9 Nuclear transcription factor Y subunit1.1e-15790.06Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ+VAD AKYLLQS+KYSEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG TQ QANDENIGKEVQH KYIPFS SPPVGEHLDLNSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQYCQMLTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNV+S+  R+EDINSGANHSTKPVSE GS YM T E GIK+TLDE+ RE MTQNMQITHAFFNGKSNV GLSTYNSQL DVEGGHLD PHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPIK
        VNGAPQRAIPIK
Subjt:  VNGAPQRAIPIK

A0A5D3CGW1 Nuclear transcription factor Y subunit1.1e-15790.06Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ+VAD AKYLLQS+KYSEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG TQ QANDENIGKEVQH KYIPFS SPPVGEHLDLNSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQYCQMLTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNV+S+  R+EDINSGANHSTKPVSE GS YM T E GIK+TLDE+ RE MTQNMQITHAFFNGKSNV GLSTYNSQL DVEGGHLD PHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPIK
        VNGAPQRAIPIK
Subjt:  VNGAPQRAIPIK

A0A6J1GNB7 Nuclear transcription factor Y subunit3.6e-15388.1Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ++ DG+KYL+QSTKYS  WW+G GNNTIAGEDATKT+SA+YLN TV+SGGTQSQ NDENIGKEVQH KYIPFSASPPVGE LDLNSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQYCQMLTS GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNVIS+  R+E INSGANHSTKPVSEAGS YMA DENGIKDTL+EE +EFMTQN+QIT AFFNGK N  G+STY SQLADVEGGHLDQPHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPI
        VNGAPQRAIPI
Subjt:  VNGAPQRAIPI

A0A6J1JW53 Nuclear transcription factor Y subunit4.8e-15086.17Show/hide
Query:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI
        +NVDQ+  DG+KYL+QSTKYSE WWHG GNNTIAGE+ATKT+S +YLN TV+SGGTQSQANDENIGKEVQH KYIPFS SPPVGE LDLNSQMELVGHSI
Subjt:  KNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSI

Query:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
        VLTSYPFSDAQYCQMLTS GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF
Subjt:  VLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF

Query:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ
        LNTKKPNNVIS+  R++ IN GANH TKPV+EAGS YM  DENGIKDTL+EE +EFMTQN+QIT AFFNGK N  G+STY SQLADVEG HLDQPHESMQ
Subjt:  LNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQ

Query:  VNGAPQRAIPI
        VNGAPQRAIPI
Subjt:  VNGAPQRAIPI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-79.4e-2649.29Show/hide
Query:  HSIVLTSYPFSDAQYCQMLTSYGPQSTLPH--FYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +S+    YP+ D  Y  +        T  H    G+    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG
Subjt:  HSIVLTSYPFSDAQYCQMLTSYGPQSTLPH--FYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGS
         GGRFLN KK +     ++ +E  N  A  S    S   S
Subjt:  SGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGS

Q8VY64 Nuclear transcription factor Y subunit A-49.4e-2641.62Show/hide
Query:  SQANDENIGKEVQHHKYIPFSASPPVGEHLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSYGPQSTLPHFY--------GLHHARMPLPLEMEEEPVY
        S  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D  Y  +   +  Q+ LPH Y        G+    +PL  +  EEPV+
Subjt:  SQANDENIGKEVQHHKYIPFSASPPVGEHLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSYGPQSTLPHFY--------GLHHARMPLPLEMEEEPVY

Query:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEA
        VNAKQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N        KE+  + ++ +T   S +
Subjt:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEA

Q945M9 Nuclear transcription factor Y subunit A-91.5e-3139.37Show/hide
Query:  GKNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQAN-DENIGKEVQHHKYIPFSASP-PVGEHLDLNSQM----
        G  VD  V       + S     PW   +              S++ + + + S G++S +N D  + KE Q       + SP   G++ D N +     
Subjt:  GKNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQAN-DENIGKEVQHHKYIPFSASP-PVGEHLDLNSQM----

Query:  --------ELVGHSI-VLTSYPFSDAQYCQMLTSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
                +LVGH++   +S P+ D  Y  ++ +YG  P   +P + G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLH
Subjt:  --------ELVGHSI-VLTSYPFSDAQYCQMLTSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH

Query:  ESRHLHAMRRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSN
        ESRH HAMRR RG+GGRF   KK N   S    +E  N    H T+  S + S+
Subjt:  ESRHLHAMRRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSN

Q9LXV5 Nuclear transcription factor Y subunit A-12.7e-2837.26Show/hide
Query:  QSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT----VTSGGTQSQANDENIG-----------KEVQHHKYIPFSASPPVGEHLDLNSQ----
        Q   Y+EPWW  +    +         + +SS +  N +    V S       N EN G           + V +H       + P     +++ Q    
Subjt:  QSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT----VTSGGTQSQANDENIG-----------KEVQHHKYIPFSASPPVGEHLDLNSQ----

Query:  -MELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAM
          ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAM
Subjt:  -MELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAM

Query:  RRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG
        RRAR SGGRF   KK     S     ED            + +GS  + TD N   +TL+  G
Subjt:  RRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG

Q9M9X4 Nuclear transcription factor Y subunit A-24.0e-2435.41Show/hide
Query:  WWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGK---------EVQHHKYIPFSASPPVGEHLDLNSQMELVGHS--IVLTSYPFSDAQY
        WW   G+  +A E     S + +  V V S G   Q  D+             +V+  + +P     P G    + S    +G S   + T YP+ + QY
Subjt:  WWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGK---------EVQHHKYIPFSASPPVGEHLDLNSQMELVGHS--IVLTSYPFSDAQY

Query:  CQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNN
          ++++YG QS            +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+RR RGSGGRFLNTK  N 
Subjt:  CQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNN

Query:  VISHA-TRKEDINSGANHSTKP-VSEAGSNYMATDENG---IKDTLDEEGREFMTQN
          S    +K D +       KP  S + ++ +   ENG   + + L+  G E  + N
Subjt:  VISHA-TRKEDINSGANHSTKP-VSEAGSNYMATDENG---IKDTLDEEGREFMTQN

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.1e-3239.37Show/hide
Query:  GKNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQAN-DENIGKEVQHHKYIPFSASP-PVGEHLDLNSQM----
        G  VD  V       + S     PW   +              S++ + + + S G++S +N D  + KE Q       + SP   G++ D N +     
Subjt:  GKNVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQAN-DENIGKEVQHHKYIPFSASP-PVGEHLDLNSQM----

Query:  --------ELVGHSI-VLTSYPFSDAQYCQMLTSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
                +LVGH++   +S P+ D  Y  ++ +YG  P   +P + G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLH
Subjt:  --------ELVGHSI-VLTSYPFSDAQYCQMLTSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH

Query:  ESRHLHAMRRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSN
        ESRH HAMRR RG+GGRF   KK N   S    +E  N    H T+  S + S+
Subjt:  ESRHLHAMRRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSN

AT5G12840.1 nuclear factor Y, subunit A11.9e-2937.26Show/hide
Query:  QSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT----VTSGGTQSQANDENIG-----------KEVQHHKYIPFSASPPVGEHLDLNSQ----
        Q   Y+EPWW  +    +         + +SS +  N +    V S       N EN G           + V +H       + P     +++ Q    
Subjt:  QSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT----VTSGGTQSQANDENIG-----------KEVQHHKYIPFSASPPVGEHLDLNSQ----

Query:  -MELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAM
          ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAM
Subjt:  -MELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAM

Query:  RRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG
        RRAR SGGRF   KK     S     ED            + +GS  + TD N   +TL+  G
Subjt:  RRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG

AT5G12840.2 nuclear factor Y, subunit A18.5e-3049.07Show/hide
Query:  ELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR
        ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRR
Subjt:  ELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR

Query:  ARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG
        AR SGGRF   KK     S     ED            + +GS  + TD N   +TL+  G
Subjt:  ARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG

AT5G12840.3 nuclear factor Y, subunit A11.9e-2937.26Show/hide
Query:  QSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT----VTSGGTQSQANDENIG-----------KEVQHHKYIPFSASPPVGEHLDLNSQ----
        Q   Y+EPWW  +    +         + +SS +  N +    V S       N EN G           + V +H       + P     +++ Q    
Subjt:  QSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT----VTSGGTQSQANDENIG-----------KEVQHHKYIPFSASPPVGEHLDLNSQ----

Query:  -MELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAM
          ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAM
Subjt:  -MELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAM

Query:  RRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG
        RRAR SGGRF   KK     S     ED            + +GS  + TD N   +TL+  G
Subjt:  RRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG

AT5G12840.4 nuclear factor Y, subunit A18.5e-3049.07Show/hide
Query:  ELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR
        ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRR
Subjt:  ELVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR

Query:  ARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG
        AR SGGRF   KK     S     ED            + +GS  + TD N   +TL+  G
Subjt:  ARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNYMATDENGIKDTLDEEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAGCAGAACAGAGTAATACCGGAATTTGATTGCAAAAGTGATTCTGAACTTGAAATCGTCGGGAGCGAAGAGGCTAGGAAATTTTCAGAGGTTGAAGTTTGTAG
AGCCTCTGTTTTGGATCTAAGAAGATTGCAGAGGATTAAAGAACTGGGTAAAATTGTGTCCTATCCAAGTGCTTTTCACGAGAAGCAAAAAGGAGCAGCGCAAACTATGG
AACCTAGTGGAGTAGATTTAGTTGAGTACCTCTTGATGCTGCGGTTTGGTATTAGTGGGAAAAATGTAGACCAACGAGTAGCTGATGGGGCGAAGTATTTGCTGCAATCG
ACCAAATACTCTGAGCCTTGGTGGCACGGAAGTGGGAACAATACCATCGCAGGTGAAGATGCTACCAAAACATCTTCTGCGGAATACCTGAACGTTACTGTCACAAGTGG
AGGAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAGTCCAGCATCACAAGTACATTCCATTTTCTGCATCCCCACCCGTGGGTGAACACCTTGATCTAAATT
CCCAGATGGAACTTGTTGGCCATTCAATTGTTTTGACATCATATCCTTTTTCAGATGCACAGTATTGTCAAATGCTGACTTCTTATGGACCACAATCAACGTTACCTCAT
TTTTATGGACTTCACCATGCTAGAATGCCTTTACCCCTTGAAATGGAAGAAGAGCCTGTTTATGTTAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCG
AGCCAAAGCTGAGCTTGAGAAGAAAGTGATCAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCGATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCC
TCAATACCAAAAAGCCCAACAATGTCATTTCCCATGCAACTAGGAAGGAAGACATCAATTCTGGTGCAAACCATTCAACAAAACCTGTCAGTGAGGCTGGATCAAATTAC
ATGGCGACTGATGAAAATGGAATCAAGGATACGCTTGATGAGGAGGGCAGAGAGTTCATGACACAAAATATGCAGATAACACACGCTTTCTTCAATGGAAAATCGAATGT
CCTTGGCCTGTCCACATACAATTCACAACTTGCTGATGTCGAGGGAGGGCATCTCGATCAGCCGCATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCA
TCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAGCAGAACAGAGTAATACCGGAATTTGATTGCAAAAGTGATTCTGAACTTGAAATCGTCGGGAGCGAAGAGGCTAGGAAATTTTCAGAGGTTGAAGTTTGTAG
AGCCTCTGTTTTGGATCTAAGAAGATTGCAGAGGATTAAAGAACTGGGTAAAATTGTGTCCTATCCAAGTGCTTTTCACGAGAAGCAAAAAGGAGCAGCGCAAACTATGG
AACCTAGTGGAGTAGATTTAGTTGAGTACCTCTTGATGCTGCGGTTTGGTATTAGTGGGAAAAATGTAGACCAACGAGTAGCTGATGGGGCGAAGTATTTGCTGCAATCG
ACCAAATACTCTGAGCCTTGGTGGCACGGAAGTGGGAACAATACCATCGCAGGTGAAGATGCTACCAAAACATCTTCTGCGGAATACCTGAACGTTACTGTCACAAGTGG
AGGAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAGTCCAGCATCACAAGTACATTCCATTTTCTGCATCCCCACCCGTGGGTGAACACCTTGATCTAAATT
CCCAGATGGAACTTGTTGGCCATTCAATTGTTTTGACATCATATCCTTTTTCAGATGCACAGTATTGTCAAATGCTGACTTCTTATGGACCACAATCAACGTTACCTCAT
TTTTATGGACTTCACCATGCTAGAATGCCTTTACCCCTTGAAATGGAAGAAGAGCCTGTTTATGTTAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCG
AGCCAAAGCTGAGCTTGAGAAGAAAGTGATCAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCGATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCC
TCAATACCAAAAAGCCCAACAATGTCATTTCCCATGCAACTAGGAAGGAAGACATCAATTCTGGTGCAAACCATTCAACAAAACCTGTCAGTGAGGCTGGATCAAATTAC
ATGGCGACTGATGAAAATGGAATCAAGGATACGCTTGATGAGGAGGGCAGAGAGTTCATGACACAAAATATGCAGATAACACACGCTTTCTTCAATGGAAAATCGAATGT
CCTTGGCCTGTCCACATACAATTCACAACTTGCTGATGTCGAGGGAGGGCATCTCGATCAGCCGCATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCA
TCAAGTGA
Protein sequenceShow/hide protein sequence
MNEQNRVIPEFDCKSDSELEIVGSEEARKFSEVEVCRASVLDLRRLQRIKELGKIVSYPSAFHEKQKGAAQTMEPSGVDLVEYLLMLRFGISGKNVDQRVADGAKYLLQS
TKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHHKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQSTLPH
FYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISHATRKEDINSGANHSTKPVSEAGSNY
MATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNVLGLSTYNSQLADVEGGHLDQPHESMQVNGAPQRAIPIK