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Lag0002786 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002786
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionarabinogalactan peptide 23-like
Genome locationchr4:45650527..45651173
RNA-Seq ExpressionLag0002786
SyntenyLag0002786
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581996.1 hypothetical protein SDJN03_21998, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1488.52Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYL
        MEMKN ACAALFAAAAVTA VASD+S SPAAAPGPSSAASAALPALGSL+GASLVSFV Y+
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYL
KAG7018419.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-1585.71Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMKN ACA LFAAAAVTA VASD+S SPAAAPGPSSAASAALPALGSL+GASLVSFV Y++N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
XP_023004714.1 arabinogalactan peptide 23-like [Cucurbita maxima]1.2e-1487.3Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMK  ACAALFAAA VTA VASD+SLSPAAAPGPSSAASAALPALGSLVGASLVSFV Y  N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
XP_023528634.1 arabinogalactan peptide 23 [Cucurbita pepo subsp. pepo]3.7e-1688.89Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMKN ACAALFAAAAVTA VASD+SLSPAAAPGPSSAASAALPALGSL+GASLVSFV Y++N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
XP_038899473.1 arabinogalactan protein 23-like [Benincasa hispida]2.0e-1484.13Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMK  ACAALFAAAAV++AVA+D+SLSPAAAPGPSSAASAALPALGSLVGASLV+FV Y +N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
TrEMBL top hitse value%identityAlignment
A0A1S3CDX5 arabinogalactan peptide 23-like2.1e-0975Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFV-VYLIN
        MEMK  ACAALFAAAAV+AAVA+D+S+SPAAAPGPSSAASAALP L    GAS+VSFV  Y +N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFV-VYLIN
A0A6J1F3F5 arabinogalactan peptide 23-like8.2e-1484.13Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMK  ACAALFAAA VTA VASD+SLSPAAAPGPSSAASA LPALGSLVGASLVS V Y  N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
A0A6J1H8I1 arabinogalactan peptide 23-like3.7e-1484.13Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMK  ACAALFAAA +TA VASD+SLSPAAAPGPSSAASAALPALGSLVGASLVSFV +  N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
A0A6J1IYE9 arabinogalactan peptide 23-like9.7e-1584.13Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMKN AC ALF AAAVTA VASD+S SPAAAPGPSSAASAALPALGSL+GASLVSFV Y++N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
A0A6J1KX42 arabinogalactan peptide 23-like5.7e-1587.3Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMK  ACAALFAAA VTA VASD+SLSPAAAPGPSSAASAALPALGSLVGASLVSFV Y  N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 235.9e-0963.49Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMK  AC  LFAAA++TA +A+++  +P  APGP+SAASAALPALGSLVGASLVS   Y ++
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)4.3e-0757.81Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGP-SSAASAALPALGSLVGASLVSFVVYLIN
        MEMK  AC  +FAAA++TA +A++     A APGP +S AS A+PALGSLVGASLVS   Y +N
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGP-SSAASAALPALGSLVGASLVSFVVYLIN
AT3G57690.1 arabinogalactan protein 234.2e-1063.49Show/hide
Query:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN
        MEMK  AC  LFAAA++TA +A+++  +P  APGP+SAASAALPALGSLVGASLVS   Y ++
Subjt:  MEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCAAGTAAAACAAGGCAATCCAGCGATCAAAGGCTTCTTCGGTTCGATTTCTCTCATCTCAATCACAGGTGAGTTTTTCAGCCGAAGAAAGCCATTTTCAATTTC
ACCCGCCATGGAAATGAAGAACTTTGCCTGCGCTGCCCTCTTCGCCGCCGCTGCCGTCACCGCAGCCGTCGCTTCCGATGACTCTCTCTCTCCCGCCGCCGCCCCGGGCC
CGAGCAGCGCCGCCTCCGCCGCTCTTCCCGCCCTTGGATCGCTCGTCGGCGCCTCGCTTGTTTCCTTCGTCGTCTACCTCATCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACCAAGTAAAACAAGGCAATCCAGCGATCAAAGGCTTCTTCGGTTCGATTTCTCTCATCTCAATCACAGGTGAGTTTTTCAGCCGAAGAAAGCCATTTTCAATTTC
ACCCGCCATGGAAATGAAGAACTTTGCCTGCGCTGCCCTCTTCGCCGCCGCTGCCGTCACCGCAGCCGTCGCTTCCGATGACTCTCTCTCTCCCGCCGCCGCCCCGGGCC
CGAGCAGCGCCGCCTCCGCCGCTCTTCCCGCCCTTGGATCGCTCGTCGGCGCCTCGCTTGTTTCCTTCGTCGTCTACCTCATCAACTGA
Protein sequenceShow/hide protein sequence
MYQVKQGNPAIKGFFGSISLISITGEFFSRRKPFSISPAMEMKNFACAALFAAAAVTAAVASDDSLSPAAAPGPSSAASAALPALGSLVGASLVSFVVYLIN