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Lag0002816 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002816
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationchr4:45934285..45936423
RNA-Seq ExpressionLag0002816
SyntenyLag0002816
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593336.1 hypothetical protein SDJN03_12812, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2581.71Show/hide
Query:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK
        FRY+NTKGL+L QRSFSITASNSSDGNSTK++NDGS+ T DAQGPPFLTILAG FVFSLV+WI++S+VT+LI LVVKLISTK
Subjt:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK

KAG7025683.1 hypothetical protein SDJN02_12181 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2581.71Show/hide
Query:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK
        FRY+NTKGL+L QRSFSITASNSSDGNSTK++NDGS+ T+DAQGPPFLTILAG FVFSLV+WI++S+VT+LI LVVKLISTK
Subjt:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK

XP_022959607.1 uncharacterized protein LOC111460632 [Cucurbita moschata]1.4e-2581.71Show/hide
Query:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK
        FRY+NTKGLKL QRSFSITASNSSDGNSTK++NDGS+ T DAQGPPFLTILAG FVFSLV+WI++S+VT+LI L VKLISTK
Subjt:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK

XP_023004845.1 uncharacterized protein LOC111498025 [Cucurbita maxima]1.6e-2684.15Show/hide
Query:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK
        FRY+NTKGLKL QRSFSITASNSSDGNSTK+ENDGS+ T DAQGPPFLTILAG FVFSLV+WI++S+VT+LI LVVKLISTK
Subjt:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK

XP_023513741.1 uncharacterized protein LOC111778262 isoform X1 [Cucurbita pepo subsp. pepo]1.4e-2563.93Show/hide
Query:  IISEDIGIVT-----------CCNEHVSIGDALLV--HNWFRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLV
        IISEDI  VT           CC   +S    +LV    + RY+NTK LKL QRSFSITASNSSDGNSTK++ DGS+ T DAQGPPFLTILAG FVFSLV
Subjt:  IISEDIGIVT-----------CCNEHVSIGDALLV--HNWFRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLV

Query:  IWIITSAVTSLIGLVVKLISTK
        +WI++S+VT+LI LVVKLISTK
Subjt:  IWIITSAVTSLIGLVVKLISTK

TrEMBL top hitse value%identityAlignment
A0A6J1CV15 uncharacterized protein LOC1110150322.2e-2178.05Show/hide
Query:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK
        FR+R+TKGL+LSQRSFSITASNSSDGNS K+     EAT DAQGPPFLTILAG FVFSL+IW+I+SA TSLIGLVVKLI  K
Subjt:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK

A0A6J1GPL5 uncharacterized protein LOC1114559845.6e-2580.49Show/hide
Query:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK
        FRYRNTKGL+L QRSFSITASNSSDGNS K+EN  S+A++DAQGPPFLTILAG+FVFSL++W+++SA TSLIGLVVKLISTK
Subjt:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK

A0A6J1H506 uncharacterized protein LOC1114606326.6e-2681.71Show/hide
Query:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK
        FRY+NTKGLKL QRSFSITASNSSDGNSTK++NDGS+ T DAQGPPFLTILAG FVFSLV+WI++S+VT+LI L VKLISTK
Subjt:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK

A0A6J1JUC2 uncharacterized protein LOC1114884368.0e-2479.01Show/hide
Query:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLIST
        FRYRNTKGL+LS RSFSITASNSSDGNS ++EN  S+A++DAQGPPFLTILAG+FVFSL++W+++SA TSLIGLVVKLIST
Subjt:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLIST

A0A6J1KVQ7 uncharacterized protein LOC1114980257.8e-2784.15Show/hide
Query:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK
        FRY+NTKGLKL QRSFSITASNSSDGNSTK+ENDGS+ T DAQGPPFLTILAG FVFSLV+WI++S+VT+LI LVVKLISTK
Subjt:  FRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTSLIGLVVKLISTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTGCTGATGGTTGTGACAGATGGATGGGCATATATTATTTCAGAAGATATCGGGATTGTTACATGTTGCAATGAGCATGTTAGCATTGGAGATGCCTTGCTGGT
TCATAATTGGTTTCGGTACAGGAACACCAAAGGATTGAAATTGAGCCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCACCAAGAAGGAAAATG
ATGGAAGTGAAGCAACTGCTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGACTTTTTGTCTTTTCCCTTGTAATTTGGATAATCACTTCTGCTGTCACGTCA
CTTATAGGTCTAGTCGTTAAGCTGATCTCTACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTGCTGATGGTTGTGACAGATGGATGGGCATATATTATTTCAGAAGATATCGGGATTGTTACATGTTGCAATGAGCATGTTAGCATTGGAGATGCCTTGCTGGT
TCATAATTGGTTTCGGTACAGGAACACCAAAGGATTGAAATTGAGCCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCACCAAGAAGGAAAATG
ATGGAAGTGAAGCAACTGCTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGACTTTTTGTCTTTTCCCTTGTAATTTGGATAATCACTTCTGCTGTCACGTCA
CTTATAGGTCTAGTCGTTAAGCTGATCTCTACAAAGTAG
Protein sequenceShow/hide protein sequence
MWLLMVVTDGWAYIISEDIGIVTCCNEHVSIGDALLVHNWFRYRNTKGLKLSQRSFSITASNSSDGNSTKKENDGSEATADAQGPPFLTILAGLFVFSLVIWIITSAVTS
LIGLVVKLISTK