; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002834 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002834
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING/U-box superfamily protein
Genome locationchr4:46111659..46113711
RNA-Seq ExpressionLag0002834
SyntenyLag0002834
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR002867 - IBR domain
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR031127 - E3 ubiquitin ligase RBR family
IPR044066 - TRIAD supradomain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058684.1 putative E3 ubiquitin-protein ligase RNF217 [Cucumis melo var. makuwa]7.2e-7264.04Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA
        +CEIC+E KE+ NMF IK CLHSFC DCV KH+S KI  G S VSC +L C + I F SC  M+  E AEKW KALCE ++ E EKV CPF+DCS  MI 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA

Query:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV--KEEERDG-LVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSSTH
        E   +  +++ ECP+CHRLFC  C VPWH  VTCE+Y+R+   E+ RD  L+KKLASQMKWM+CP+C+F+VEKV+GCLHITCRCRFEFCYACGS WSSTH
Subjt:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV--KEEERDG-LVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSSTH

Query:  GGC
        GGC
Subjt:  GGC

TYK10490.1 putative E3 ubiquitin-protein ligase RNF217 [Cucumis melo var. makuwa]1.6e-7164.04Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA
        +CEIC+E KE+ NMF IK CLHSFC DCV KH+S KI  G S VSC +L C + I F SC  M+  E AEKW KALCE ++ E EKV CPF+DCS  MI 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA

Query:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV--KEEERDG-LVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSSTH
        E   +  +++ ECP+CHRLFC  C VPWH  VTCE+Y+R+   EE RD  L+KKLASQMKWM+CP+C+ +VEKV+GCLHITCRCRFEFCYACGS WSSTH
Subjt:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV--KEEERDG-LVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSSTH

Query:  GGC
        GGC
Subjt:  GGC

XP_016176749.1 probable E3 ubiquitin-protein ligase RNF144A [Arachis ipaensis]4.3e-6958.94Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA
        +CEIC E K    MF  K+C HSFC DCVTKH++ KI    ++V CP L C   ++ +SCR M+ KEV ++W+ ALCEALF    K +CPF DCSA ++ 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA

Query:  E-EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST
        E EG EG ++E+ECP CHRLFCARC VPWH  V C   + + E+ER   D L++ LA+Q KW RCPRCKFYVEK  GCLHITCRCRF+FCYACG PWSST
Subjt:  E-EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST

Query:  HGGCRLN
        HGGC+ N
Subjt:  HGGCRLN

XP_022146079.1 probable E3 ubiquitin-protein ligase RNF217 [Momordica charantia]4.8e-7664.42Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV-VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMI-
        +CEIC+E+K   NMFTI+ CLHSFC  CV KH++AKI  GS  VSCPSL C   ++FE+C  M+ K VAEKW++ALCEALF EAEKV CPF+DCSA M+ 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV-VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMI-

Query:  AEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKE------EERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPW
         E+G    + ESECP+CHRLFCA+C VPWHA VTCEEY+R K+      E+ D L+K +A +M+WMRCPRCKF+VEK  GCLHITCRC+FEFCYACGS W
Subjt:  AEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKE------EERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPW

Query:  SSTHGGCR
        S  HGGCR
Subjt:  SSTHGGCR

XP_025620362.1 probable E3 ubiquitin-protein ligase RNF144A [Arachis hypogaea]1.1e-6959.42Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA
        +CEIC E K    MF  K+C HSFC DCVTKH++ KI    ++V CP L C   ++ +SCR M+ KEV ++W+ ALCEALF    K +CPF DCSA ++ 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA

Query:  E-EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST
        E EG EG ++E+ECP CHRLFCARC VPWH  V C   + + E+ER   D L++ LA+Q KW RCPRCKFYVEK  GCLHITCRCRFEFCYACG PWSST
Subjt:  E-EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST

Query:  HGGCRLN
        HGGC+ N
Subjt:  HGGCRLN

TrEMBL top hitse value%identityAlignment
A0A444XVR6 Putative E3 ubiquitin-protein ligase2.1e-6958.94Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA
        +CEIC E K    MF  K+C HSFC DCVTKH++ KI    ++V CP L C   ++ +SCR M+ KEV ++W+ ALCEALF    K +CPF DCSA ++ 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA

Query:  E-EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST
        E EG EG ++E+ECP CHRLFCARC VPWH  V C   + + E+ER   D L++ LA+Q KW RCPRCKFYVEK  GCLHITCRCRF+FCYACG PWSST
Subjt:  E-EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST

Query:  HGGCRLN
        HGGC+ N
Subjt:  HGGCRLN

A0A445BFE9 Uncharacterized protein5.5e-7059.42Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA
        +CEIC E K    MF  K+C HSFC DCVTKH++ KI    ++V CP L C   ++ +SCR M+ KEV ++W+ ALCEALF    K +CPF DCSA ++ 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA

Query:  E-EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST
        E EG EG ++E+ECP CHRLFCARC VPWH  V C   + + E+ER   D L++ LA+Q KW RCPRCKFYVEK  GCLHITCRCRFEFCYACG PWSST
Subjt:  E-EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST

Query:  HGGCRLN
        HGGC+ N
Subjt:  HGGCRLN

A0A5A7UU31 Putative E3 ubiquitin-protein ligase RNF2173.5e-7264.04Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA
        +CEIC+E KE+ NMF IK CLHSFC DCV KH+S KI  G S VSC +L C + I F SC  M+  E AEKW KALCE ++ E EKV CPF+DCS  MI 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA

Query:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV--KEEERDG-LVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSSTH
        E   +  +++ ECP+CHRLFC  C VPWH  VTCE+Y+R+   E+ RD  L+KKLASQMKWM+CP+C+F+VEKV+GCLHITCRCRFEFCYACGS WSSTH
Subjt:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV--KEEERDG-LVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSSTH

Query:  GGC
        GGC
Subjt:  GGC

A0A5D3CGK1 Putative E3 ubiquitin-protein ligase RNF2177.7e-7264.04Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA
        +CEIC+E KE+ NMF IK CLHSFC DCV KH+S KI  G S VSC +L C + I F SC  M+  E AEKW KALCE ++ E EKV CPF+DCS  MI 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAG-SVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA

Query:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV--KEEERDG-LVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSSTH
        E   +  +++ ECP+CHRLFC  C VPWH  VTCE+Y+R+   EE RD  L+KKLASQMKWM+CP+C+ +VEKV+GCLHITCRCRFEFCYACGS WSSTH
Subjt:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV--KEEERDG-LVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSSTH

Query:  GGC
        GGC
Subjt:  GGC

A0A6J1CX43 probable E3 ubiquitin-protein ligase RNF2172.3e-7664.42Show/hide
Query:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV-VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMI-
        +CEIC+E+K   NMFTI+ CLHSFC  CV KH++AKI  GS  VSCPSL C   ++FE+C  M+ K VAEKW++ALCEALF EAEKV CPF+DCSA M+ 
Subjt:  MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV-VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMI-

Query:  AEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKE------EERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPW
         E+G    + ESECP+CHRLFCA+C VPWHA VTCEEY+R K+      E+ D L+K +A +M+WMRCPRCKF+VEK  GCLHITCRC+FEFCYACGS W
Subjt:  AEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKE------EERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPW

Query:  SSTHGGCR
        S  HGGCR
Subjt:  SSTHGGCR

SwissProt top hitse value%identityAlignment
F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic7.6e-1628.65Show/hide
Query:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV--VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALF--SEAEKVFCPFEDC-SAE
        C IC+   E  + ++++ C H FC  C+ +   A +       + C  + C   I     R ++++E  ++   A   +    S+ +  FC   DC S  
Subjt:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV--VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALF--SEAEKVFCPFEDC-SAE

Query:  MIAEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYAC
         +A   E G  +   C  CH   C RC + +H  +TCE Y++ KE   D  +K  A       CP CK  +EK +GC H+ CRC    C+ C
Subjt:  MIAEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYAC

P0CE10 ATP-dependent RNA helicase DEAH11, chloroplastic7.6e-1629.17Show/hide
Query:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV--VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALF--SEAEKVFCPFEDC-SAE
        C IC+   E  + ++++ C H FC  C+ +   A +       + C  + C   I     R ++++E  ++   A   A    S+ +  FC   DC S  
Subjt:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV--VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALF--SEAEKVFCPFEDC-SAE

Query:  MIAEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYAC
         +A   E G  +   C  CH   C RC + +H  +TCE Y++ KE   D  +K  A       CP CK  +EK +GC H+ CRC    C+ C
Subjt:  MIAEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYAC

Q54CX4 Uncharacterized protein DDB_G02926426.8e-1728.99Show/hide
Query:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV--VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA
        C+IC  + +Q N      C H +C DC+T+H+   I  G V  +SCP   C   I+      +  ++   K++K    A        +CP  DC   +  
Subjt:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV--VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIA

Query:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTC--EEYE------RVKEEERDGLVKKLASQMKWMR-CPRCKFYVEKVNGCLHITC-RCRFEFCYACG
          G         CP C   FC  CG   H    C  E  E      +  E      +  L S   +++ CP CK ++EK +GC H+TC  C+ +FC+ C 
Subjt:  EEGEEGAVKESECPVCHRLFCARCGVPWHAEVTC--EEYE------RVKEEERDGLVKKLASQMKWMR-CPRCKFYVEKVNGCLHITC-RCRFEFCYACG

Query:  SPWSSTH
        +P+ S H
Subjt:  SPWSSTH

Q7Z419 E3 ubiquitin-protein ligase RNF144B6.2e-1825.91Show/hide
Query:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKI--AAGSVVSCPSLGCPN--TIQFESCRKMVAKEVAEKWEKALCE-ALFSEAEKVFCPFEDCSAE
        C++C+ ++    M T++ C   FC  C+ +++   I    GS ++CP + C N  T+Q      +V  +  + +++   E  +  +  + +CP  DC   
Subjt:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKI--AAGSVVSCPSLGCPN--TIQFESCRKMVAKEVAEKWEKALCE-ALFSEAEKVFCPFEDCSAE

Query:  MIAEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCR-CRFEFCYAC
              + G     ECP CH  FC+ C   WHAEV+C + + +        +    ++    +CP C+ Y+E+  GC  + C+ C+  FC+ C
Subjt:  MIAEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCR-CRFEFCYAC

Q9LVW9 Putative E3 ubiquitin-protein ligase ARI41.9e-1931.03Show/hide
Query:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKI--AAGSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKV-FCPFEDCSAEMI
        C+ICME+   K   T   C H FC DC  +H + +I    G  + C +  C NTI  +  R++V+ E+AEK+++ L E+   +   V +CP        I
Subjt:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKI--AAGSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKV-FCPFEDCSAEMI

Query:  AEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEERDGLVKKLASQMKWMR-----CPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWS
            ++G V E EC  C   FC  C    H+  +C  ++  K++  D      +  + WM      CP+C   ++K +GC H+TC+C   FC+ CG    
Subjt:  AEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEERDGLVKKLASQMKWMR-----CPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWS

Query:  STH
          H
Subjt:  STH

Arabidopsis top hitse value%identityAlignment
AT3G14250.1 RING/U-box superfamily protein4.2e-5443.63Show/hide
Query:  MCEICMEKKEQKNMFT-IKRCLHSFCCDCVTKHISAKIAA-GSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMI
        +C ICM++K   ++F     C H++C DC  ++++ KI    S + CP + C   I+  +CR ++ K+V ++WEK LCE+L S  +K +CPF+DCSA M+
Subjt:  MCEICMEKKEQKNMFT-IKRCLHSFCCDCVTKHISAKIAA-GSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMI

Query:  AEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV------KEEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPW
          E  +  V ++EC  CHRLFC +C V WHA + C+E++R         +E D L+ ++A   +W RCP CKFYV+KV GC HI CRC ++FCY CGS W
Subjt:  AEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERV------KEEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPW

Query:  SSTH
        SS+H
Subjt:  SSTH

AT3G45540.1 RING/U-box protein with C6HC-type zinc finger9.4e-3833.98Show/hide
Query:  CEICMEKKEQKN-MFTIKRCLHSFCCDCVTKHISAKIAAGSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIAE
        C+IC++    +N MF + +C H FC DC+ +HI  ++  GSV+ CP   C  T++F  C  ++  ++ E W++ + E L     +++CP   CSA +++E
Subjt:  CEICMEKKEQKN-MFTIKRCLHSFCCDCVTKHISAKIAAGSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIAE

Query:  EGEEGAVKESE----CPVCHRLFCARCGVPWHAEVTCEEYERVK--EEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSS
             + KE E    C  C ++FC +C V WH+ ++C +Y+++     E DG +K LA+Q +W +C +C+  +E   GC+ + CRC  +FCY CG     
Subjt:  EGEEGAVKESE----CPVCHRLFCARCGVPWHAEVTCEEYERVK--EEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSS

Query:  THGGCR
          GGC+
Subjt:  THGGCR

AT3G53690.1 RING/U-box superfamily protein8.8e-5245.88Show/hide
Query:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV-VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIAE
        CEIC++ K     F I  C H +C DCV+K+I+AK+    + + CP  GC   ++ + CR+++ KEV ++W  ALCEA+   ++K +CP++DCSA +  E
Subjt:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSV-VSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIAE

Query:  EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSP
        E E   +K+SECP CHR+ C  CG  WH E+TCEE++++   ER   D L+  +A Q KW RCP CKFY+EK  GCL++ CRC   FCY CG+P
Subjt:  EGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEER---DGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSP

AT5G37560.1 RING/U-box superfamily protein6.3e-4236.82Show/hide
Query:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEM----
        C IC +K + ++M    +CLH  C  CV + +  K+ +G V  C   GC + +  ESC  ++  ++ E W++ + E L  +AEK++CP+  CS  M    
Subjt:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEM----

Query:  IAEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEE--RDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST
        ++ E E+  V+   C  C  LFC  C VPWH++++C +Y+R+  E    D ++K LA+   W +C  CK  +E   GC HITCRC +EFCY CG  W+  
Subjt:  IAEEGEEGAVKESECPVCHRLFCARCGVPWHAEVTCEEYERVKEEE--RDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSST

Query:  H
        H
Subjt:  H

AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein4.2e-3834.45Show/hide
Query:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIAEE
        C IC      + MF++ +C H FC  CV +H+  K+  G    CP  GC + +  ++C K++  ++++ W++ L E      E+V+CP+  CSA M   +
Subjt:  CEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIAEE

Query:  GEEGAVK---------ESECPVCHRLFCARCGVPWHAEVTCEEYERVKEE--ERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGS
          E A              C  C  LFC  C VPWH  ++C EY+++  E    D  +K LA+   W +C +C+  +E   GC HITCRC  EFCY CG 
Subjt:  GEEGAVK---------ESECPVCHRLFCARCGVPWHAEVTCEEYERVKEE--ERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGS

Query:  PWSSTHGGC
         W+   G C
Subjt:  PWSSTHGGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAGATTTGCATGGAGAAGAAAGAACAGAAAAATATGTTCACGATCAAGAGGTGCCTTCACTCGTTCTGCTGCGACTGCGTAACCAAACACATCTCCGCCAAGAT
CGCCGCCGGCTCCGTCGTTTCCTGCCCTAGTTTGGGCTGCCCGAACACCATACAGTTCGAATCCTGCCGGAAAATGGTGGCGAAGGAAGTGGCGGAGAAGTGGGAGAAAG
CGCTGTGCGAAGCGCTTTTTTCAGAAGCGGAGAAAGTGTTCTGCCCTTTCGAGGACTGCTCTGCGGAAATGATTGCGGAGGAAGGGGAAGAGGGAGCGGTGAAGGAGAGC
GAGTGCCCGGTGTGCCACAGGCTGTTCTGCGCCAGGTGTGGAGTGCCGTGGCACGCGGAAGTCACGTGCGAGGAATACGAGAGAGTGAAGGAAGAGGAGAGAGATGGGTT
GGTGAAAAAGCTGGCGTCTCAAATGAAATGGATGAGATGCCCTCGCTGCAAGTTCTACGTTGAGAAGGTTAATGGCTGCTTGCACATCACTTGCAGGTGTCGATTCGAGT
TCTGCTATGCCTGTGGATCACCTTGGTCTTCCACTCATGGTGGCTGCCGACTCAACTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAGATTTGCATGGAGAAGAAAGAACAGAAAAATATGTTCACGATCAAGAGGTGCCTTCACTCGTTCTGCTGCGACTGCGTAACCAAACACATCTCCGCCAAGAT
CGCCGCCGGCTCCGTCGTTTCCTGCCCTAGTTTGGGCTGCCCGAACACCATACAGTTCGAATCCTGCCGGAAAATGGTGGCGAAGGAAGTGGCGGAGAAGTGGGAGAAAG
CGCTGTGCGAAGCGCTTTTTTCAGAAGCGGAGAAAGTGTTCTGCCCTTTCGAGGACTGCTCTGCGGAAATGATTGCGGAGGAAGGGGAAGAGGGAGCGGTGAAGGAGAGC
GAGTGCCCGGTGTGCCACAGGCTGTTCTGCGCCAGGTGTGGAGTGCCGTGGCACGCGGAAGTCACGTGCGAGGAATACGAGAGAGTGAAGGAAGAGGAGAGAGATGGGTT
GGTGAAAAAGCTGGCGTCTCAAATGAAATGGATGAGATGCCCTCGCTGCAAGTTCTACGTTGAGAAGGTTAATGGCTGCTTGCACATCACTTGCAGGTGTCGATTCGAGT
TCTGCTATGCCTGTGGATCACCTTGGTCTTCCACTCATGGTGGCTGCCGACTCAACTACTGA
Protein sequenceShow/hide protein sequence
MCEICMEKKEQKNMFTIKRCLHSFCCDCVTKHISAKIAAGSVVSCPSLGCPNTIQFESCRKMVAKEVAEKWEKALCEALFSEAEKVFCPFEDCSAEMIAEEGEEGAVKES
ECPVCHRLFCARCGVPWHAEVTCEEYERVKEEERDGLVKKLASQMKWMRCPRCKFYVEKVNGCLHITCRCRFEFCYACGSPWSSTHGGCRLNY