CuGenDBv2

Gene ID	Lag0002835
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
Genome location	chr4:46115048..46115671
RNA-Seq Expression	Lag0002835
Synteny	Lag0002835
Gene Ontology terms	GO:0016020 - membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR044960 - Ribulose bisphosphate carboxylase/oxygenase activase-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593351.1 hypothetical protein SDJN03_12827, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-55

86.23

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MA AISG+SLPSLF YKNSIIARKSRIR FS+RS KDVS     G G GGEP Q+ KRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLG+DSDIVFDYRQKVTRSFE+LQGDYYIAPVFM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

KAG7025696.1 hypothetical protein SDJN02_12194, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-55

86.23

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MA AISG+SLPSLF YKNSIIARKSRIR FS+RS KDVS     G G GGEP Q+ KRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLG+DSDIVFDYRQKVTRSFE+LQGDYYIAPVFM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

XP_022960536.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Cucurbita moschata]

1.7e-58

89.13

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MAIAISG+SLPSLF YKNSIIARKSRIR FS+RS KDVS E   G GGGGEPSQ+ KRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLG+DSDIVFDYRQKVTRSFE+LQGDYYIAPVFM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

XP_023004209.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Cucurbita maxima]

7.9e-56

86.23

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MAIAIS +SLPSLFQYKN IIARKSRIR FS+RS KDVS    G G GGGEP Q+ KRLSEKSSWEAKDSEGKDYLYRLG+EADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLG+DSDIVFDYRQKVTRSFE+LQGDYYIAPVFM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

XP_023515166.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Cucurbita pepo subsp. pepo]

1.1e-57

88.41

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MAIAISG+SLPSLF YKNSIIARKSRIR FS+RS KDVS    G G GGGEPSQ+ KRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLG+DSDIVFDYRQKVTRSFE+LQGDYYIAPVFM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

TrEMBL top hits

e value

%identity

Alignment

A0A5D3CFD7 Ribulose bisphosphate carboxylase/oxygenase activase

5.1e-53

80.43

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MA +ISGLSLPS+F+YK+SI+ARK R   FS+RSS DVS EV G GG G + S+R KRLSE+S+WEAKDSEGKDYLYRLG+EADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLGKDSDIVFDYRQKVTRSFE+LQGDYYIAP FM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

A0A6J1DL15 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1

1.4e-55

84.06

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MAI+ISGLSLPSLFQYKNS IAR+ RIR F++RSSKDV  E    GGG GEPS+R KRLSE+SSWEAKDSEG+DYLYRLG+EADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLG+DSDIVFDYR KVTRSFEYLQGDYYIAPVFM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

A0A6J1DL44 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X2

1.4e-55

84.06

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MAI+ISGLSLPSLFQYKNS IAR+ RIR F++RSSKDV  E    GGG GEPS+R KRLSE+SSWEAKDSEG+DYLYRLG+EADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLG+DSDIVFDYR KVTRSFEYLQGDYYIAPVFM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

A0A6J1H7W0 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic

8.2e-59

89.13

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MAIAISG+SLPSLF YKNSIIARKSRIR FS+RS KDVS E   G GGGGEPSQ+ KRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLG+DSDIVFDYRQKVTRSFE+LQGDYYIAPVFM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

A0A6J1KVM6 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic

3.8e-56

86.23

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Query:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL
        MAIAIS +SLPSLFQYKN IIARKSRIR FS+RS KDVS    G G GGGEP Q+ KRLSEKSSWEAKDSEGKDYLYRLG+EADNMNIAVGARAG+IDDL
Subjt:  MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDL

Query:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        FAGNFLG+DSDIVFDYRQKVTRSFE+LQGDYYIAPVFM
Subjt:  FAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G73110.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

8.2e-35

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Query:  DGG----GGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDLFAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM
        DGG      GG +P   +K+LSE+SSWE KDSEGKDYLYRLG+E+DN+NIAVGAR+G+IDD+F G+FLGKDSDIVFDYRQK TRSFE+LQGDYYIAP F+
Subjt:  DGG----GGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDLFAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM

Sequences

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CDS sequence

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ATGGCTATCGCTATATCTGGCCTCTCCCTTCCCTCACTCTTTCAGTACAAAAATTCAATTATAGCGCGAAAAAGCCGAATTCGTCACTTCTCCTTACGATCTTCCAAGGA
TGTTTCCGATGAAGTCGACGGCGGCGGCGGTGGCGGTGGCGAGCCGTCGCAGAGGCAGAAGAGGCTGTCGGAGAAATCTTCCTGGGAAGCCAAGGACTCCGAGGGCAAGG
ACTATCTTTATAGGCTTGGAAGCGAGGCAGATAACATGAACATCGCCGTCGGCGCTAGAGCTGGCATCATCGACGATCTCTTCGCCGGCAACTTCCTTGGCAAAGACTCG
GACATTGTGTTTGATTACCGCCAGAAGGTCACGAGATCGTTCGAGTACCTTCAAGGAGACTATTACATTGCTCCTGTTTTCATGGTAGCTAATGATTCTTCTTCTTTGTT
CTTTATTATCAATATTGTTCAGTTGATTCGCTATTTTCTGAAACTGCAACGTCGACCGATCTCGTGGTCTTGA

mRNA sequence

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Protein sequence

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MAIAISGLSLPSLFQYKNSIIARKSRIRHFSLRSSKDVSDEVDGGGGGGGEPSQRQKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGIIDDLFAGNFLGKDS
DIVFDYRQKVTRSFEYLQGDYYIAPVFMVANDSSSLFFIINIVQLIRYFLKLQRRPISWS

Lag0002835 (gene) of Sponge gourd (AG-4) v1 genome