; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002848 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002848
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:46217282..46222261
RNA-Seq ExpressionLag0002848
SyntenyLag0002848
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058699.1 hypothetical protein E6C27_scaffold339G001690 [Cucumis melo var. makuwa]1.4e-4387.72Show/hide
Query:  CLILGLLLRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLE
        CLI G+  R  LTEE+GSCNMVLDSVLSSPHRRSPSFRK F PNELGSWSTL+QRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFGLT  QKAQCQLE
Subjt:  CLILGLLLRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLE

Query:  LAKTSMAKGKLKIL
        LAKTS+AKGKLKIL
Subjt:  LAKTSMAKGKLKIL
KAE8646426.1 hypothetical protein Csa_016913 [Cucumis sativus]4.5e-4282.26Show/hide
Query:  EPACLILGLL-------LRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLT
        EP+CL   LL       L   LTEE GSC MVLDSVLSSPHRRSPSFRK F PNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFGLT
Subjt:  EPACLILGLL-------LRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLT

Query:  RVQKAQCQLELAKTSMAKGKLKIL
          QKAQC LELAKTSMAKGKLKIL
Subjt:  RVQKAQCQLELAKTSMAKGKLKIL
KAG6593358.1 hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sororia]6.9e-4392.52Show/hide
Query:  LRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMA
        L I LTEEVGSCNMVLDSVLSSPHRRSPSFRK FPPNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLG SSSC GLT  QKAQCQLELAKTSMA
Subjt:  LRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMA

Query:  KGKLKIL
        KGKLKIL
Subjt:  KGKLKIL
KAG7025704.1 hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-4294.17Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKL
        LTEEVGSCNMVLDSVLSSPHRRSPSFRK FPPNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLG SSSC GLT  QKAQCQLELAKTSMAKGKL
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKL

Query:  KIL
        KIL
Subjt:  KIL
XP_022155001.1 uncharacterized protein LOC111022141 [Momordica charantia]1.8e-3892.55Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKPFPPNE GSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFG+T VQK QC+LELAK SMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKLKIL
TrEMBL top hitse value%identityAlignment
A0A0A0K6S1 Uncharacterized protein4.4e-4387.72Show/hide
Query:  CLILGLLLRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLE
        CLI G+  R  LTEE GSC MVLDSVLSSPHRRSPSFRK F PNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFGLT  QKAQC LE
Subjt:  CLILGLLLRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLE

Query:  LAKTSMAKGKLKIL
        LAKTSMAKGKLKIL
Subjt:  LAKTSMAKGKLKIL
A0A5D3CG60 Uncharacterized protein6.8e-4487.72Show/hide
Query:  CLILGLLLRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLE
        CLI G+  R  LTEE+GSCNMVLDSVLSSPHRRSPSFRK F PNELGSWSTL+QRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFGLT  QKAQCQLE
Subjt:  CLILGLLLRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLE

Query:  LAKTSMAKGKLKIL
        LAKTS+AKGKLKIL
Subjt:  LAKTSMAKGKLKIL
A0A6J1DQE0 uncharacterized protein LOC1110221418.6e-3992.55Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKPFPPNE GSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFG+T VQK QC+LELAK SMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKLKIL
A0A6J1H8Z6 uncharacterized protein LOC1114607226.1e-3793.62Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRK FPPNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLG SSSC GLT  QKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKLKIL
A0A6J1KRB5 uncharacterized protein LOC1114979678.0e-3792.55Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRK FPPNELGSWSTL+QRHRFLLTAL LLTFLCTIYLYFAVTLG SSSC GLT  QKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLELAKTSMAKGKLKIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16170.1 unknown protein1.3e-2363.44Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGS-SSSCFGLTRVQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR    +K +  +ELGSWSTL+QRH++LLTALALL FLCT+YLYFAVTLG+  SSC+GLT   KA CQL+L + +++KGKLK
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGS-SSSCFGLTRVQKAQCQLELAKTSMAKGKLK
AT1G79660.1 unknown protein2.0e-1956.99Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSS-SCFGLTRVQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR  + +K +  ++LGS ST+VQRHRFLLTA+ LL FLCTIY+YFAVTLG+    C G+T   KA CQ+E  + S + GKLK
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSS-SCFGLTRVQKAQCQLELAKTSMAKGKLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCCATCATGCGGGCTTGGACTAACCAAGTCTACCTCACCCCATCTAGCTCGGGCCAATGCACTTCATCTAAGTCGAGCTCACCCAGCAGAGGTCGTGGCCGAGCG
CCTCTTGCCAAGGCCGAGCACAAACTCTAAAGTACAGCAAGCAGAAAGGGAGATAGCTGTGCTCGGCCTCTTCCCGAGGCCGAGGCCGACCAGCACCACTTTTGATGACG
ATAAAGCTGCACATAGGTCAACAAAGGCAAAGATTATTACTCTTAAATCGGGCTTAAGGAGCTCAACTTATAGCAGACAACCGGGGAGAAATCAGGCTGGGATACGGGCC
AAGGAGGCGGAGCCGGCAAGCGGGACGGGCCAAGGCCGAAGGGGTGGGTTTTTGGCCCGACCCCATGCTCGGCCTCGGCCCATGGTCGAGGCTGAGCCCGTTCGGTCTCG
TCTGGTCCCCACCGCCTCTGGCTGCCCGGTTTCGCCTGCATCGGAGCCGGTGTGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCGTCTTCCCCCTCAT
CTACAAATTTATCGTTGGTGGCACGTGAAGGTCAGGTTTTGATTCCGTATAGTAATGTGCCTCGATCTGCTTTTGGTGTAAAATCAAGAATTCGATCTTCTGAAACAAAG
AATTCATCTCAGGCACCTTTTGAACCTGCTTGCCTGATTCTCGGTCTACTTCTCAGAATTTGGCTGACTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCT
GTCTTCTCCTCACAGGAGGTCTCCATCATTCCGGAAGCCCTTTCCTCCGAATGAGTTGGGTAGTTGGTCGACTCTGGTGCAGCGACATCGATTCCTCCTGACTGCACTTG
CCCTTTTGACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTAGGGTGCAAAAAGCTCAGTGTCAACTGGAG
CTTGCCAAAACTTCCATGGCTAAAGGGAAACTGAAAATTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCCATCATGCGGGCTTGGACTAACCAAGTCTACCTCACCCCATCTAGCTCGGGCCAATGCACTTCATCTAAGTCGAGCTCACCCAGCAGAGGTCGTGGCCGAGCG
CCTCTTGCCAAGGCCGAGCACAAACTCTAAAGTACAGCAAGCAGAAAGGGAGATAGCTGTGCTCGGCCTCTTCCCGAGGCCGAGGCCGACCAGCACCACTTTTGATGACG
ATAAAGCTGCACATAGGTCAACAAAGGCAAAGATTATTACTCTTAAATCGGGCTTAAGGAGCTCAACTTATAGCAGACAACCGGGGAGAAATCAGGCTGGGATACGGGCC
AAGGAGGCGGAGCCGGCAAGCGGGACGGGCCAAGGCCGAAGGGGTGGGTTTTTGGCCCGACCCCATGCTCGGCCTCGGCCCATGGTCGAGGCTGAGCCCGTTCGGTCTCG
TCTGGTCCCCACCGCCTCTGGCTGCCCGGTTTCGCCTGCATCGGAGCCGGTGTGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCGTCTTCCCCCTCAT
CTACAAATTTATCGTTGGTGGCACGTGAAGGTCAGGTTTTGATTCCGTATAGTAATGTGCCTCGATCTGCTTTTGGTGTAAAATCAAGAATTCGATCTTCTGAAACAAAG
AATTCATCTCAGGCACCTTTTGAACCTGCTTGCCTGATTCTCGGTCTACTTCTCAGAATTTGGCTGACTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCT
GTCTTCTCCTCACAGGAGGTCTCCATCATTCCGGAAGCCCTTTCCTCCGAATGAGTTGGGTAGTTGGTCGACTCTGGTGCAGCGACATCGATTCCTCCTGACTGCACTTG
CCCTTTTGACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTAGGGTGCAAAAAGCTCAGTGTCAACTGGAG
CTTGCCAAAACTTCCATGGCTAAAGGGAAACTGAAAATTCTTTGA
Protein sequenceShow/hide protein sequence
MSPSCGLGLTKSTSPHLARANALHLSRAHPAEVVAERLLPRPSTNSKVQQAEREIAVLGLFPRPRPTSTTFDDDKAAHRSTKAKIITLKSGLRSSTYSRQPGRNQAGIRA
KEAEPASGTGQGRRGGFLARPHARPRPMVEAEPVRSRLVPTASGCPVSPASEPVWRAPHRCAGLLSCRPSSPSSTNLSLVAREGQVLIPYSNVPRSAFGVKSRIRSSETK
NSSQAPFEPACLILGLLLRIWLTEEVGSCNMVLDSVLSSPHRRSPSFRKPFPPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTRVQKAQCQLE
LAKTSMAKGKLKIL