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Lag0002853 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002853
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-CCHC_4 domain-containing protein
Genome locationchr4:46243226..46243980
RNA-Seq ExpressionLag0002853
SyntenyLag0002853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD6336366.1 unnamed protein product [Miscanthus lutarioriparius]2.9e-0741.67Show/hide
Query:  MGFRNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHL
        +G  N+  AR IG+ +G+F+E+     DL  G+ +R++VR+DICKPL RG +      +G+ W  I Y KHL
Subjt:  MGFRNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHL

CAD6336404.1 unnamed protein product [Miscanthus lutarioriparius]1.7e-0741.67Show/hide
Query:  MGFRNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHL
        +G  N+  AR IG+ +G+F+E+     DL  G+ +R++VR+DICKPL RG +      +G+ W  I Y KHL
Subjt:  MGFRNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHL

KAF4400882.1 hypothetical protein G4B88_004425 [Cannabis sativa]5.0e-0741.89Show/hide
Query:  RNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYYN
        ++K  AR IGN IG FLE+ + + +  WG  +RIRV ID+ KPL+RG M+    ++   W+  RYE+ L+  Y+
Subjt:  RNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYYN

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]5.3e-0932.43Show/hide
Query:  NKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYYNVEQTEEVRKENSEVFIRRKGKEPLLAS
        NK  A ++GN+IG F ++     +  WG  +R+RVR D+ KPL RG  L   G  G CW+ I+YE+  +  Y+  + + + K+ S+  +    K      
Subjt:  NKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYYNVEQTEEVRKENSEVFIRRKGKEPLLAS

Query:  QNSDGCNLEYG
              NL+YG
Subjt:  QNSDGCNLEYG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.1e-0942.11Show/hide
Query:  MGFRNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYY
        M + NK  A ++GN+IG F+++    +   WG S+RIRV IDI KPL RG  +   G  G CW+ I+YE+  +  Y
Subjt:  MGFRNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYY

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054812.6e-0932.43Show/hide
Query:  NKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYYNVEQTEEVRKENSEVFIRRKGKEPLLAS
        NK  A ++GN+IG F ++     +  WG  +R+RVR D+ KPL RG  L   G  G CW+ I+YE+  +  Y+  + + + K+ S+  +    K      
Subjt:  NKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYYNVEQTEEVRKENSEVFIRRKGKEPLLAS

Query:  QNSDGCNLEYG
              NL+YG
Subjt:  QNSDGCNLEYG

A0A6J1DU55 uncharacterized protein LOC1110231354.4e-0942.11Show/hide
Query:  MGFRNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYY
        M + NK  A ++GN+IG F+++    +   WG S+RIRV IDI KPL RG  +   G  G CW+ I+YE+  +  Y
Subjt:  MGFRNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYY

A0A7J6I007 Uncharacterized protein2.4e-0741.89Show/hide
Query:  RNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYYN
        ++K  AR IGN IG FLE+ + + +  WG  +RIRV ID+ KPL+RG M+    ++   W+  RYE+ L+  Y+
Subjt:  RNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYYN

A0A803P119 Uncharacterized protein6.4e-0839.73Show/hide
Query:  RNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYY
        + KV A  IG+ +G+FL++ + + +  WG  +RIR+ +D+ +PL+RG +LK TG+  + WV ++YEK  +I Y
Subjt:  RNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYY

A0A803PZC2 Uncharacterized protein3.2e-0743.28Show/hide
Query:  RNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEK
        ++K+ A  +GN IG+FL++ E + D  WG  +RIRVR+ I KPL+RG M+    I+ + W+  RYE+
Subjt:  RNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTAGAAACAAAGTAGAAGCAAGGAAAATCGGAAATAGCATTGGAAAATTTCTAGAAATAGGGGAAAGGAATGAAGATCTGATTTGGGGCCAAAGTGTTCGCAT
TAGAGTGAGGATAGACATCTGTAAACCATTGATAAGAGGATTCATGCTGAAGGCCACTGGGATTGAAGGAAATTGTTGGGTAACCATTCGATATGAAAAACATCTCGAAA
TCTATTATAATGTGGAGCAAACTGAAGAAGTTAGAAAGGAAAATAGTGAGGTGTTCATTAGAAGAAAAGGAAAAGAACCGCTGTTAGCCAGCCAGAACTCAGATGGATGT
AACTTGGAATACGGATCTATTAGAGAAGAAGGAACCTCATCATGGACTTATGATCTAAATACTACAATTGAAGGAGGCTTAGATATGAATGAACAACAGCTGGGGGAAAA
GGAAAAAATAGATGAGGAGATGAGGATGAGGAACCTCACTAAAAGGAATGCAACTGATGAACTCAAGATGGATGGAAAGAAGCAGAGAACTGATGAAAGCAGGGCTATGG
AGACCTTAGACTGTGATATCCAAGTGGTAGTGGTTGTTCACCATGAATGTCCTTTGTTGGAATGCTCGGGGTGTGGGGAACCCGCGAGCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTAGAAACAAAGTAGAAGCAAGGAAAATCGGAAATAGCATTGGAAAATTTCTAGAAATAGGGGAAAGGAATGAAGATCTGATTTGGGGCCAAAGTGTTCGCAT
TAGAGTGAGGATAGACATCTGTAAACCATTGATAAGAGGATTCATGCTGAAGGCCACTGGGATTGAAGGAAATTGTTGGGTAACCATTCGATATGAAAAACATCTCGAAA
TCTATTATAATGTGGAGCAAACTGAAGAAGTTAGAAAGGAAAATAGTGAGGTGTTCATTAGAAGAAAAGGAAAAGAACCGCTGTTAGCCAGCCAGAACTCAGATGGATGT
AACTTGGAATACGGATCTATTAGAGAAGAAGGAACCTCATCATGGACTTATGATCTAAATACTACAATTGAAGGAGGCTTAGATATGAATGAACAACAGCTGGGGGAAAA
GGAAAAAATAGATGAGGAGATGAGGATGAGGAACCTCACTAAAAGGAATGCAACTGATGAACTCAAGATGGATGGAAAGAAGCAGAGAACTGATGAAAGCAGGGCTATGG
AGACCTTAGACTGTGATATCCAAGTGGTAGTGGTTGTTCACCATGAATGTCCTTTGTTGGAATGCTCGGGGTGTGGGGAACCCGCGAGCATTTAG
Protein sequenceShow/hide protein sequence
MGFRNKVEARKIGNSIGKFLEIGERNEDLIWGQSVRIRVRIDICKPLIRGFMLKATGIEGNCWVTIRYEKHLEIYYNVEQTEEVRKENSEVFIRRKGKEPLLASQNSDGC
NLEYGSIREEGTSSWTYDLNTTIEGGLDMNEQQLGEKEKIDEEMRMRNLTKRNATDELKMDGKKQRTDESRAMETLDCDIQVVVVVHHECPLLECSGCGEPASI