CuGenDBv2

Gene ID	Lag0002858
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	GAG1At protein
Genome location	chr4:46281173..46282386
RNA-Seq Expression	Lag0002858
Synteny	Lag0002858
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004135879.1 uncharacterized protein LOC101214375 [Cucumis sativus]

3.7e-26

59.84

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        MSGEAKSGGASGG GGFRSRMEHYLYSGDKKHVAAGI + GIIFGIPW LMNRG                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSSGSSSAK
        H+SHQDYME+ADKARSQRLSSGSSSAK
Subjt:  HQSHQDYMEKADKARSQRLSSGSSSAK

XP_008461185.1 PREDICTED: uncharacterized protein LOC103499845 [Cucumis melo]

6.3e-26

59.84

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        MSGEAKSGGASGG GGFRSRME+YLYSGDKKHVAAGI + GIIFGIPW LMNRG                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSSGSSSAK
        HQSHQDYME+ADKARSQRLSSGSSSAK
Subjt:  HQSHQDYMEKADKARSQRLSSGSSSAK

XP_022953259.1 uncharacterized protein LOC111455862 [Cucurbita moschata]

2.2e-26

60.63

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        MSGEAKSGG+ GGGGGFRSRMEHYLYSG+KKHVAAGI VIGIIFGIPW LMNRG                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSSGSSSAK
        HQSHQDYME+ADKARSQRLSSGSSSAK
Subjt:  HQSHQDYMEKADKARSQRLSSGSSSAK

XP_022992483.1 uncharacterized protein LOC111488802 [Cucurbita maxima]

4.9e-26

59.84

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        MSG+AKSGG+ GGGGGFRSRMEHYLYSG+KKHVAAGI VIGIIFGIPW LMNRG                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSSGSSSAK
        HQSHQDYME+ADKARSQRLSSGSSSAK
Subjt:  HQSHQDYMEKADKARSQRLSSGSSSAK

XP_038897164.1 uncharacterized protein LOC120085312 isoform X2 [Benincasa hispida]

4.5e-24

59.5

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        MSGEAK GGA+GG GGFRSRMEHYLYSG+KKHVAAGI VIGIIFGIPWVLMNRG                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSS
        HQSHQDYMEKADKARSQRLSS
Subjt:  HQSHQDYMEKADKARSQRLSS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CEK3 uncharacterized protein LOC103499845

3.1e-26

59.84

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        MSGEAKSGGASGG GGFRSRME+YLYSGDKKHVAAGI + GIIFGIPW LMNRG                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSSGSSSAK
        HQSHQDYME+ADKARSQRLSSGSSSAK
Subjt:  HQSHQDYMEKADKARSQRLSSGSSSAK

A0A2P5DWZ4 GAG1At protein

2.4e-23

54.96

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Query:  MSGEAKSGGASGGGG----GFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSL
        MSGEAKSGG+S GGG    GFR RMEHYLYSGDKKHV AGIA+I ++FGIPWVLMNRG                                          
Subjt:  MSGEAKSGGASGGGG----GFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSL

Query:  KRSKHQSHQDYMEKADKARSQRLSSGSSSAK
          +KHQSHQDY+EKADKARSQRLSSGSSS K
Subjt:  KRSKHQSHQDYMEKADKARSQRLSSGSSSAK

A0A5D3CFG0 Uncharacterized protein

3.1e-26

59.84

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        MSGEAKSGGASGG GGFRSRME+YLYSGDKKHVAAGI + GIIFGIPW LMNRG                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSSGSSSAK
        HQSHQDYME+ADKARSQRLSSGSSSAK
Subjt:  HQSHQDYMEKADKARSQRLSSGSSSAK

A0A6J1GP50 uncharacterized protein LOC111455862

1.1e-26

60.63

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        MSGEAKSGG+ GGGGGFRSRMEHYLYSG+KKHVAAGI VIGIIFGIPW LMNRG                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSSGSSSAK
        HQSHQDYME+ADKARSQRLSSGSSSAK
Subjt:  HQSHQDYMEKADKARSQRLSSGSSSAK

A0A6J1JZC0 uncharacterized protein LOC111488802

2.4e-26

59.84

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        MSG+AKSGG+ GGGGGFRSRMEHYLYSG+KKHVAAGI VIGIIFGIPW LMNRG                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSSGSSSAK
        HQSHQDYME+ADKARSQRLSSGSSSAK
Subjt:  HQSHQDYMEKADKARSQRLSSGSSSAK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16000.1 unknown protein

5.2e-18

42.31

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Query:  MSGEAKSGG---ASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLK
        M  E K+ G   +  GGGGFR++MEHY+YSG+KKHV  GI ++ IIFG+PW LM +G                                           
Subjt:  MSGEAKSGG---ASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLK

Query:  RSKHQSHQDYMEKADKARSQRLSSGSSSAK
         SKHQSHQDYM+KADKAR  RLSS SS+ K
Subjt:  RSKHQSHQDYMEKADKARSQRLSSGSSSAK

AT1G80890.1 unknown protein

1.0e-18

45.67

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Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK
        M  E+KS   + GGGG R++MEHY+YSG+KKHV AGI +I IIFGIPW LMN+G                                            SK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSK

Query:  HQSHQDYMEKADKARSQRLSSGSSSAK
        H+SHQDY+EKADKAR  RLSS SSS K
Subjt:  HQSHQDYMEKADKARSQRLSSGSSSAK

Sequences

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CDS sequence

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ATGAGCGGCGAGGCCAAAAGCGGCGGTGCAAGCGGCGGAGGAGGTGGTTTCAGATCGAGAATGGAGCACTATTTATACAGCGGCGATAAAAAGCACGTAGCGGCTGGCAT
CGCCGTCATTGGCATCATTTTCGGCATCCCTTGGGTCCTCATGAACCGAGGGTTTAGAAATTGTAAGTTTTGCTGTTGGGATGCTCCTAAAGATTCCAAGAGAAATCAAA
AAGTGATGATGCCTTGCGGCTGTATGGGAGATGATCTAGAACAACATATTTGGGTGATCATGTCTTTAAAAAGATCAAAACATCAGTCTCATCAAGATTACATGGAAAAA
GCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGA

mRNA sequence

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Protein sequence

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MSGEAKSGGASGGGGGFRSRMEHYLYSGDKKHVAAGIAVIGIIFGIPWVLMNRGFRNCKFCCWDAPKDSKRNQKVMMPCGCMGDDLEQHIWVIMSLKRSKHQSHQDYMEK
ADKARSQRLSSGSSSAK

Lag0002858 (gene) of Sponge gourd (AG-4) v1 genome