; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002879 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002879
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpentatricopeptide repeat-containing protein At1g80550, mitochondrial
Genome locationchr4:46431935..46432369
RNA-Seq ExpressionLag0002879
SyntenyLag0002879
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014158.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-1976.12Show/hide
Query:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        I SFSDVFLP A   FSTKT NPISE  F FNS   RP Q NFDP TVRE LDSYCNDWRRSYEFFN
Subjt:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

XP_022148858.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Momordica charantia]1.0e-1973.53Show/hide
Query:  FIISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        FI+SFS+V LPP    FSTKT  PISE + KFNSP+ RP+Q NFDPSTVRE LDSYCNDWRRS+EFFN
Subjt:  FIISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

XP_022953157.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata]5.9e-2076.12Show/hide
Query:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        I SFSDVFLP A   FSTKT NPISE  F FN+P+ RP Q NFDP TVRE LDSYCNDWRRSYEFFN
Subjt:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

XP_022991827.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima]3.8e-1974.63Show/hide
Query:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        I SFSDVFLP A   FSTKT NPIS   F FN+P+ RP Q NFDP TVRE LDSYCNDWRRSYEFFN
Subjt:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

XP_038896131.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Benincasa hispida]2.6e-2077.61Show/hide
Query:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        IISFSDVFLPPA   FSTKTINPI E  FKF+SP+ R    NFDP TVRE LDSYCNDWRRSYEFFN
Subjt:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

TrEMBL top hitse value%identityAlignment
A0A1S3CFA1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial2.3e-1775Show/hide
Query:  FLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        FLPPA   FSTKTINPI E +FKFN+ + RP   NFDPSTVRE LDSYCNDW+RSYEFFN
Subjt:  FLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

A0A5A7UVK9 Pentatricopeptide repeat-containing protein2.3e-1775Show/hide
Query:  FLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        FLPPA   FSTKTINPI E +FKFN+ + RP   NFDPSTVRE LDSYCNDW+RSYEFFN
Subjt:  FLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

A0A6J1D599 pentatricopeptide repeat-containing protein At1g80550, mitochondrial4.9e-2073.53Show/hide
Query:  FIISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        FI+SFS+V LPP    FSTKT  PISE + KFNSP+ RP+Q NFDPSTVRE LDSYCNDWRRS+EFFN
Subjt:  FIISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

A0A6J1GNU3 pentatricopeptide repeat-containing protein At1g80550, mitochondrial2.8e-2076.12Show/hide
Query:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        I SFSDVFLP A   FSTKT NPISE  F FN+P+ RP Q NFDP TVRE LDSYCNDWRRSYEFFN
Subjt:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

A0A6J1JMZ1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial1.8e-1974.63Show/hide
Query:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN
        I SFSDVFLP A   FSTKT NPIS   F FN+P+ RP Q NFDP TVRE LDSYCNDWRRSYEFFN
Subjt:  IISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAATTATAACAAATTGTCACTTTGTCAGCATAAGCATAGTTCAACTGAATCAGAAACCCAAAACCTCTCGGATCGGAAATGCTCTATTCGTTCGCTTCCCGCCGT
TTCCTGCGCGTTTATTATTTCCTTCTCCGACGTGTTCCTCCCGCCGGCGATCCAATCCTTTTCCACCAAAACAATCAATCCCATTTCAGAGTCCAATTTCAAGTTCAATA
GCCCGAAGCCTCGTCCGATACAACCTAATTTCGACCCTTCTACTGTTCGTGAGGTGCTTGATTCTTACTGCAATGACTGGAGGCGTTCATACGAGTTTTTCAACTTGGAT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGACTAATTATAACAAATTGTCACTTTGTCAGCATAAGCATAGTTCAACTGAATCAGAAACCCAAAACCTCTCGGATCGGAAATGCTCTATTCGTTCGCTTCCCGCCGT
TTCCTGCGCGTTTATTATTTCCTTCTCCGACGTGTTCCTCCCGCCGGCGATCCAATCCTTTTCCACCAAAACAATCAATCCCATTTCAGAGTCCAATTTCAAGTTCAATA
GCCCGAAGCCTCGTCCGATACAACCTAATTTCGACCCTTCTACTGTTCGTGAGGTGCTTGATTCTTACTGCAATGACTGGAGGCGTTCATACGAGTTTTTCAACTTGGAT
TGA
Protein sequenceShow/hide protein sequence
MTNYNKLSLCQHKHSSTESETQNLSDRKCSIRSLPAVSCAFIISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFNLD