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Lag0002883 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002883
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSerine-rich protein-related
Genome locationchr4:46452007..46452477
RNA-Seq ExpressionLag0002883
SyntenyLag0002883
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058731.1 uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]4.1e-2568.63Show/hide
Query:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKT----TPPRRNQSK-----TD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS--DHR
        MA KTA SSRLCLCAPTTHPGSFRCSLHRRP  +S+KT     PP  +QSK     TD   +KAFLMQ++KPSSH LQRR NFQPKPSRFCN+ S  D R
Subjt:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKT----TPPRRNQSK-----TD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS--DHR

Query:  LA
        LA
Subjt:  LA

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2980.21Show/hide
Query:  MATKTAPSS-RLCLCAPTTHPGSFRCSLHRRPHKASNK--TTPPRRNQSK----TDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGSDHRLA
        MA KTAPSS RLCLCAPTTHPGSFRCSLHRR  KASNK    PP  NQSK    TDLVKAFLMQVIKPSS DLQRRRNFQPKPSRFCN  SD+ LA
Subjt:  MATKTAPSS-RLCLCAPTTHPGSFRCSLHRRPHKASNK--TTPPRRNQSK----TDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGSDHRLA

KAG7014157.1 hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-2875Show/hide
Query:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRRNQSK--------TDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGSDHRL
        MA KTA SSRLCLCAPT+HPGSFRCSLHRRP KAS+KTT  R +QSK        T L K FLMQ IKPSSHDL RRRNFQPKPSRFCN  SDHRL
Subjt:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRRNQSK--------TDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGSDHRL

KAG7025727.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3079Show/hide
Query:  MATKTAPSS-RLCLCAPTTHPGSFRCSLHRRPHKASNK--TTPPRRNQSK----TDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGSDHRLADYAK
        MA KTAPSS RLCLCAPTTHPGSFRCSLHRR  KASNK    PP  NQSK    TDLVKAFLMQVIKPSS DLQRRRNFQPKPSRFCN  SD+ LAD  K
Subjt:  MATKTAPSS-RLCLCAPTTHPGSFRCSLHRRPHKASNK--TTPPRRNQSK----TDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGSDHRLADYAK

XP_022151454.1 uncharacterized protein LOC111019381 [Momordica charantia]4.7e-2978.26Show/hide
Query:  MATKTAPS----SRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRR----NQSKTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS
        MATKTAPS    SRLCLCAPTTHPGSFRCSLHRRP KAS+K+         + +KTDLVKAFLMQ+IKPSSHDLQRRRNFQPKPSRFCNVGS
Subjt:  MATKTAPS----SRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRR----NQSKTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS

TrEMBL top hitse value%identityAlignment
A0A0A0K698 Uncharacterized protein2.2e-2466.99Show/hide
Query:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKTTP-----PRRNQSK-----TD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNV--GSDH
        M  KTA SSRLCLCAPTTHPGSFRCSLHRR   +S+KT P     PR +QSK     TD  L+KAFLMQ++KPSSHDLQRR +F+PKPSRFC+V   SD 
Subjt:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKTTP-----PRRNQSK-----TD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNV--GSDH

Query:  RLA
        RLA
Subjt:  RLA

A0A1Q3BSF8 Uncharacterized protein (Fragment)3.3e-2059.78Show/hide
Query:  TAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRRN-----------QSKTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGSD
        ++ SSR CLC+PTTHPGSFRC+LHR   K S K+T    N            SKT++VKAFLMQ+IKPSS DLQRRRNFQPKP+RFC + S+
Subjt:  TAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRRN-----------QSKTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGSD

A0A1S3CEH6 uncharacterized protein LOC1034998227.6e-2567.65Show/hide
Query:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKT----TPPRRNQSK-----TD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS--DHR
        M  KTA SSRLCLCAPTTHPGSFRCSLHRRP  +S+KT     PP  +QSK     TD   +KAFLMQ++KPSSH LQRR NFQPKPSRFCN+ S  D R
Subjt:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKT----TPPRRNQSK-----TD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS--DHR

Query:  LA
        LA
Subjt:  LA

A0A5A7UZ19 Uncharacterized protein2.0e-2568.63Show/hide
Query:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKT----TPPRRNQSK-----TD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS--DHR
        MA KTA SSRLCLCAPTTHPGSFRCSLHRRP  +S+KT     PP  +QSK     TD   +KAFLMQ++KPSSH LQRR NFQPKPSRFCN+ S  D R
Subjt:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKT----TPPRRNQSK-----TD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS--DHR

Query:  LA
        LA
Subjt:  LA

A0A6J1DD51 uncharacterized protein LOC1110193812.3e-2978.26Show/hide
Query:  MATKTAPS----SRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRR----NQSKTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS
        MATKTAPS    SRLCLCAPTTHPGSFRCSLHRRP KAS+K+         + +KTDLVKAFLMQ+IKPSSHDLQRRRNFQPKPSRFCNVGS
Subjt:  MATKTAPS----SRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRR----NQSKTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein2.3e-0543.48Show/hide
Query:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRRNQS
        ++ +T+ +  +C+C+PTTHPGSF+C LHR P    NK+      QS
Subjt:  MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRRNQS

AT5G11090.1 serine-rich protein-related4.0e-1043.18Show/hide
Query:  SRLCLCAPTTHPGSFRCSLHR---RPH---KASNKTTPPRRNQS------------KTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSR
        SR C+C+PTTHPGSFRCSLH+    PH    AS  T      +S            + + V+  L  +I+PSSH L+RR  +QP+PSR
Subjt:  SRLCLCAPTTHPGSFRCSLHR---RPH---KASNKTTPPRRNQS------------KTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSR

AT5G20370.1 serine-rich protein-related1.2e-0636.54Show/hide
Query:  SSRLCLCAPTTHPGSFRCSLHRRPHKASNKT----TPPRRNQSKT--------DLVKAFLM--------------------QVIKPSSHDLQRRRNFQPK
        + R CLC+PTTHPGSFRCS HRR     +KT    T  R N+           +L K  LM                     + KPSS    RR  F+P+
Subjt:  SSRLCLCAPTTHPGSFRCSLHRRPHKASNKT----TPPRRNQSKT--------DLVKAFLM--------------------QVIKPSSHDLQRRRNFQPK

Query:  PSRF
         SRF
Subjt:  PSRF

AT5G25280.1 serine-rich protein-related3.4e-0938.14Show/hide
Query:  KTAPSSRLCLCAPTTHPGSFRCSLHR---RPH---KASNKTTPPRRNQS------------KTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNV
        K   S R C+C+PTTHPGSFRCSLH+    PH    AS  T      +S            + + V+  L  +I+PSSH L+RR  ++P+ SR  ++
Subjt:  KTAPSSRLCLCAPTTHPGSFRCSLHR---RPH---KASNKTTPPRRNQS------------KTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNV

AT5G25280.2 serine-rich protein-related3.4e-0938.14Show/hide
Query:  KTAPSSRLCLCAPTTHPGSFRCSLHR---RPH---KASNKTTPPRRNQS------------KTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNV
        K   S R C+C+PTTHPGSFRCSLH+    PH    AS  T      +S            + + V+  L  +I+PSSH L+RR  ++P+ SR  ++
Subjt:  KTAPSSRLCLCAPTTHPGSFRCSLHR---RPH---KASNKTTPPRRNQS------------KTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCAAAACCGCTCCCTCTTCCCGCCTCTGCCTCTGCGCTCCGACCACCCACCCCGGCTCCTTCCGCTGCAGCCTCCACCGCCGTCCACACAAGGCCTCCAACAA
AACGACGCCGCCGCGTCGAAACCAATCCAAGACCGATCTCGTTAAGGCGTTTCTGATGCAGGTCATCAAGCCGTCGAGTCACGATCTCCAGAGGAGGAGGAATTTCCAGC
CTAAACCCTCCCGATTCTGCAATGTCGGATCCGATCATCGCTTGGCGGATTATGCAAAATTCGAAGCGATGATTAAGCGTTCGCTTCTTTTTTTGACGAGGTGGATGATG
AATTCGCTTGTGGAATCTGAGAGATCAGCGTTTGATCTTGTTTTGATGTTCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCAAAACCGCTCCCTCTTCCCGCCTCTGCCTCTGCGCTCCGACCACCCACCCCGGCTCCTTCCGCTGCAGCCTCCACCGCCGTCCACACAAGGCCTCCAACAA
AACGACGCCGCCGCGTCGAAACCAATCCAAGACCGATCTCGTTAAGGCGTTTCTGATGCAGGTCATCAAGCCGTCGAGTCACGATCTCCAGAGGAGGAGGAATTTCCAGC
CTAAACCCTCCCGATTCTGCAATGTCGGATCCGATCATCGCTTGGCGGATTATGCAAAATTCGAAGCGATGATTAAGCGTTCGCTTCTTTTTTTGACGAGGTGGATGATG
AATTCGCTTGTGGAATCTGAGAGATCAGCGTTTGATCTTGTTTTGATGTTCGATTAA
Protein sequenceShow/hide protein sequence
MATKTAPSSRLCLCAPTTHPGSFRCSLHRRPHKASNKTTPPRRNQSKTDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCNVGSDHRLADYAKFEAMIKRSLLFLTRWMM
NSLVESERSAFDLVLMFD