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Lag0002908 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002908
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:46622574..46626683
RNA-Seq ExpressionLag0002908
SyntenyLag0002908
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593392.1 hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2271.76Show/hide
Query:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK
        MA+ SLSTS  LYH S++VTA +IA+PL SSFHA P I FS  H  RSSLLL+ NPCAK AVCTAA+RPPPDSDPPP++DPIRLK
Subjt:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK

XP_023004358.1 uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima]2.5e-2374.12Show/hide
Query:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK
        MAS SLSTS  LYH S++VTA +IA+PL SSFHARP I FS  H  RSSLLL+ NPCAK AVCTAA+RPPPDSDPPP++DPIRLK
Subjt:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK

XP_023004359.1 uncharacterized protein LOC111497700 isoform X2 [Cucurbita maxima]2.5e-2374.12Show/hide
Query:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK
        MAS SLSTS  LYH S++VTA +IA+PL SSFHARP I FS  H  RSSLLL+ NPCAK AVCTAA+RPPPDSDPPP++DPIRLK
Subjt:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK

XP_023513765.1 uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo]2.1e-2269.32Show/hide
Query:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLKDWS
        MAS SLSTS  LYH S++VTA +IA+PL SSFHA P I FS  H  RSSLLL+ NPCAK AVC AA+RPPPDSDPPP++DPIRLK ++
Subjt:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLKDWS

XP_023513766.1 uncharacterized protein LOC111778275 isoform X2 [Cucurbita pepo subsp. pepo]3.6e-2271.76Show/hide
Query:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK
        MAS SLSTS  LYH S++VTA +IA+PL SSFHA P I FS  H  RSSLLL+ NPCAK AVC AA+RPPPDSDPPP++DPIRLK
Subjt:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK

TrEMBL top hitse value%identityAlignment
A0A6J1CXJ1 uncharacterized protein LOC1110151785.3e-1969.86Show/hide
Query:  YHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK
        YHS+ S+TAS+IAVPLCS F   P I FSSHHR RSSLLL+ NP A  A C+AA+RPPPDS PPP+KDPIR K
Subjt:  YHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK

A0A6J1H516 uncharacterized protein LOC111460643 isoform X11.9e-2170.59Show/hide
Query:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK
        MA+ SLSTS  LYH S++VTA +IA+PL SSFHA P I FS  H  RSSLLL+ NP AK AVCTAA+RPPPDSDPPP++DPIRLK
Subjt:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK

A0A6J1H6G6 uncharacterized protein LOC111460643 isoform X21.9e-2170.59Show/hide
Query:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK
        MA+ SLSTS  LYH S++VTA +IA+PL SSFHA P I FS  H  RSSLLL+ NP AK AVCTAA+RPPPDSDPPP++DPIRLK
Subjt:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK

A0A6J1KW20 uncharacterized protein LOC111497700 isoform X21.2e-2374.12Show/hide
Query:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK
        MAS SLSTS  LYH S++VTA +IA+PL SSFHARP I FS  H  RSSLLL+ NPCAK AVCTAA+RPPPDSDPPP++DPIRLK
Subjt:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK

A0A6J1KZ93 uncharacterized protein LOC111497700 isoform X11.2e-2374.12Show/hide
Query:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK
        MAS SLSTS  LYH S++VTA +IA+PL SSFHARP I FS  H  RSSLLL+ NPCAK AVCTAA+RPPPDSDPPP++DPIRLK
Subjt:  MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGCTCTCTCTCTCTACTTCACGCTTTCTCTACCATTCTTCACAGTCCGTTACCGCCTCTTCCATCGCCGTTCCTCTCTGTTCAAGCTTCCATGCTCGCCCGGG
AATTCTCTTCTCTTCGCACCATCGTAGCCGTTCATCTCTCTTGCTCGCCCCCAATCCTTGTGCCAAATTCGCCGTTTGCACCGCCGCAATACGGCCGCCGCCGGACTCCG
ATCCGCCTCCCGAGAAGGATCCGATTCGTCTAAAAGATTGGTCTCGTAGGTGTTTTGGTGCCCTGTCTTTCTTTGATGGGGATTTGCTTCATGCATGTATAAGAAGAATG
TCTACGAAGCTTGCAGTTGAGATATTTGGGTGTTGCTTGCAGCATCAGAATGATGGGAGATATGATTGGTTCGTGCGAGAATTAGAAGTGGTTGTGGTTGACATATTGCC
AATAGTTCTATCTAGCTACAGCATGCTTTTTCCGTCAGTAGTCAGCACCAAAACTTATCAAGAGCCGTCCACGTGTACAACGACAGTGGCATGGCGGGACCCATCGCTAG
TGTCTTGTGTCGACGTGTCGGACAGTCGAAGGTGGAAAGCCTGCGTTGCTCCTGTGGTGGGACGACAAGTCGACAACAAACCCAAAATATCGACTTCACTGCCTCTGCTT
CTTCCTTCTCTGTCTGCTTCCTTTGATGCCTATGTCTACGATCCAAATATTTCTATTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGCTCTCTCTCTCTACTTCACGCTTTCTCTACCATTCTTCACAGTCCGTTACCGCCTCTTCCATCGCCGTTCCTCTCTGTTCAAGCTTCCATGCTCGCCCGGG
AATTCTCTTCTCTTCGCACCATCGTAGCCGTTCATCTCTCTTGCTCGCCCCCAATCCTTGTGCCAAATTCGCCGTTTGCACCGCCGCAATACGGCCGCCGCCGGACTCCG
ATCCGCCTCCCGAGAAGGATCCGATTCGTCTAAAAGATTGGTCTCGTAGGTGTTTTGGTGCCCTGTCTTTCTTTGATGGGGATTTGCTTCATGCATGTATAAGAAGAATG
TCTACGAAGCTTGCAGTTGAGATATTTGGGTGTTGCTTGCAGCATCAGAATGATGGGAGATATGATTGGTTCGTGCGAGAATTAGAAGTGGTTGTGGTTGACATATTGCC
AATAGTTCTATCTAGCTACAGCATGCTTTTTCCGTCAGTAGTCAGCACCAAAACTTATCAAGAGCCGTCCACGTGTACAACGACAGTGGCATGGCGGGACCCATCGCTAG
TGTCTTGTGTCGACGTGTCGGACAGTCGAAGGTGGAAAGCCTGCGTTGCTCCTGTGGTGGGACGACAAGTCGACAACAAACCCAAAATATCGACTTCACTGCCTCTGCTT
CTTCCTTCTCTGTCTGCTTCCTTTGATGCCTATGTCTACGATCCAAATATTTCTATTTTCTAA
Protein sequenceShow/hide protein sequence
MASLSLSTSRFLYHSSQSVTASSIAVPLCSSFHARPGILFSSHHRSRSSLLLAPNPCAKFAVCTAAIRPPPDSDPPPEKDPIRLKDWSRRCFGALSFFDGDLLHACIRRM
STKLAVEIFGCCLQHQNDGRYDWFVRELEVVVVDILPIVLSSYSMLFPSVVSTKTYQEPSTCTTTVAWRDPSLVSCVDVSDSRRWKACVAPVVGRQVDNKPKISTSLPLL
LPSLSASFDAYVYDPNISIF