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Lag0002923 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002923
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAspartate-glutamate racemase family
Genome locationchr4:46733393..46734361
RNA-Seq ExpressionLag0002923
SyntenyLag0002923
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575585.1 hypothetical protein SDJN03_26224, partial [Cucurbita argyrosperma subsp. sororia]3.6e-7974.53Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT--------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKF
        MASSK+WATTIS  AS  YFLLIF Q+PLFRVPCR +        SCTTPLELTCSQLL S +FPAP+V+ LLYPGAIAKA+ +NKPIP F +LPK+YKF
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT--------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKF

Query:  IHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKA
        I +K P  SP TSDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKSS YN N     +YPTMF+AV+LAFLSVRKDVRRIVR +KA
Subjt:  IHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKA

Query:  QTNPSWKKPKRK
        Q NPSWKK  ++
Subjt:  QTNPSWKKPKRK

KAG7014126.1 hypothetical protein SDJN02_24299 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-7974.53Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT--------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKF
        MASSK+WATTIS  AS  YFLLIF Q+PLFRVPCR +        SCTTPLELTCSQLL S +FPAP+V+ LLYPGAIAKA+ +NKPIP F +LPK+YKF
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT--------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKF

Query:  IHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKA
        I +K P  SP TSDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKSS YN N     +YPTMF+AV+LAFLSVRKDVRRIVR +KA
Subjt:  IHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKA

Query:  QTNPSWKKPKRK
        Q NPSWKK  ++
Subjt:  QTNPSWKKPKRK

XP_022953288.1 uncharacterized protein LOC111455879 [Cucurbita moschata]3.0e-7875Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT--------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKF
        MASSK+WATTIS  AS  YFLLIF Q+PLFRVPCR +        SCTTPLELTCSQLL S +FPAP+V+ LLYPGAIAKA+ +NKPIP F +LPK+YKF
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT--------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKF

Query:  IHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKA
        I +K P  SP TSDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKS+ Y+ N     +YPTMF+AV+LAFLSVRKDVRRIVR +KA
Subjt:  IHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKA

Query:  QTNPSWKK
        Q NPSWKK
Subjt:  QTNPSWKK

XP_022992029.1 uncharacterized protein LOC111488501 [Cucurbita maxima]2.7e-7974.88Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT-------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFI
        MASSK+WATTIS  AS  YFLLIF Q+PLFRVPCR +       SCTTPLELTCSQLL S +FPAP+V+ LLYPGAIAKA+ +NKPIP F +LPK+YKFI
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT-------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFI

Query:  HLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKAQ
         +K P  SP TSDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKSS YN N     +YPTMF+AV+LAFLSVRKDVRRIVR +KAQ
Subjt:  HLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKAQ

Query:  TNPSWKKPKRK
         NPSWKK  ++
Subjt:  TNPSWKKPKRK

XP_023548699.1 uncharacterized protein LOC111807273 [Cucurbita pepo subsp. pepo]1.8e-7873.71Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT---------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYK
        MASSK+WATTIS  AS  YFLLIF Q+PLFRVPCR +         SCTTPLELTCSQLL S +FP P+V+ LLYPGAIAKA+ +NKPIP F +LPK+YK
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT---------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYK

Query:  FIHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIK
        FI +K P  SP TSDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKSS YN N     +YPTMF+AV+LAFLSVRKDVRRIVR +K
Subjt:  FIHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIK

Query:  AQTNPSWKKPKRK
        AQ NPSWKK  ++
Subjt:  AQTNPSWKKPKRK

TrEMBL top hitse value%identityAlignment
A0A0A0K6D6 Uncharacterized protein4.7e-6967.27Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFIHLKPAPS
        M SSKRWATTIS  AS  YFL+I  QIPLFRV CR   CTTPLELTCSQLL S++F A +VK +LYPGAIAKA+  NKPIP F +LPKLYKFIH    PS
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFIHLKPAPS

Query:  PLTSDLHRLE------------VIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYNFNPNN----MEMYPTMFVAVVLAFLSVRKDVRRI
        PL+SDLHRLE            VIAGSYLAVGG +MGMVR G GRMSLFGCL+ +WGIVWRKSSY  NPN      ++YPTMF+ ++LAFLSVRKDVRRI
Subjt:  PLTSDLHRLE------------VIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYNFNPNN----MEMYPTMFVAVVLAFLSVRKDVRRI

Query:  VRSIKAQTNP--SWKKPKRK
        VR++K Q NP  S  KPKRK
Subjt:  VRSIKAQTNP--SWKKPKRK

A0A1S3CDX1 uncharacterized protein LOC1034997821.7e-7171.15Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFIHLKPAPS
        M SS RWATTIS  AS  YFL+I  QIPLFRV CR T CTTPLELTCSQLL S++F   +VK +LYPGAIAKA+  NKPIP F++LPKLYKFI     PS
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFIHLKPAPS

Query:  PLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYNFNPNN----MEMYPTMFVAVVLAFLSVRKDVRRIVRSIKAQTNP--
        PLTSDLHRLEVIAGSYLAVGG IMGMVR G GRMSLFGCL+ MWGIVWRKSSY  NPN      ++YPTMF+ ++LAFLSVRKDVRRIVR++K Q+NP  
Subjt:  PLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYNFNPNN----MEMYPTMFVAVVLAFLSVRKDVRRIVRSIKAQTNP--

Query:  SWKKPKRK
           KPKRK
Subjt:  SWKKPKRK

A0A6J1DXZ5 uncharacterized protein LOC1110256112.6e-7576.67Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVP-CRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFIHLK--P
        MASSKR ATTIS  AS  YFLLIF QIPLFRVP CR  SCTTPLELTCSQLL S+IFP  +V+ALLYPGAI KA+LRN+PIP F++LPKLYKFIHLK   
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVP-CRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFIHLK--P

Query:  APSPLTSDLHRLEVIAGSYLAVGGAIMGMVRP----GSGRMSLFGCLVAMWGIVWRKSSY-NFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKAQT
        + SPLTSDLHRLEVIAGSYLAV GAIMGMVRP    GSGRMSLFGCL+AMWGIV  K SY N       +YPTMFVAVV AFLSVRKDVRRIVRSI+ + 
Subjt:  APSPLTSDLHRLEVIAGSYLAVGGAIMGMVRP----GSGRMSLFGCLVAMWGIVWRKSSY-NFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKAQT

Query:  NPSWKKPKRK
        NPSWKKPKRK
Subjt:  NPSWKKPKRK

A0A6J1GMZ9 uncharacterized protein LOC1114558791.5e-7875Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT--------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKF
        MASSK+WATTIS  AS  YFLLIF Q+PLFRVPCR +        SCTTPLELTCSQLL S +FPAP+V+ LLYPGAIAKA+ +NKPIP F +LPK+YKF
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT--------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKF

Query:  IHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKA
        I +K P  SP TSDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKS+ Y+ N     +YPTMF+AV+LAFLSVRKDVRRIVR +KA
Subjt:  IHLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKA

Query:  QTNPSWKK
        Q NPSWKK
Subjt:  QTNPSWKK

A0A6J1JWG5 uncharacterized protein LOC1114885011.3e-7974.88Show/hide
Query:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT-------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFI
        MASSK+WATTIS  AS  YFLLIF Q+PLFRVPCR +       SCTTPLELTCSQLL S +FPAP+V+ LLYPGAIAKA+ +NKPIP F +LPK+YKFI
Subjt:  MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRAT-------SCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFI

Query:  HLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKAQ
         +K P  SP TSDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKSS YN N     +YPTMF+AV+LAFLSVRKDVRRIVR +KAQ
Subjt:  HLK-PAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSS-YNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKAQ

Query:  TNPSWKKPKRK
         NPSWKK  ++
Subjt:  TNPSWKKPKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80200.1 unknown protein2.9e-3138.18Show/hide
Query:  SSKRWATTISGIASFSYFLLIFLQIPLFR-----------------------------VPCRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKA
        S K+WA+ IS IAS  + LLI  QIPLFR                             V CR  SC TPLE+  S+L+ +D+ P+ LVK LLYPGAI K+
Subjt:  SSKRWATTISGIASFSYFLLIFLQIPLFR-----------------------------VPCRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKA

Query:  MLRNKPIPAFHALPKLYKFIHLKPAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWG----IVWRKSSYNF---NPNNMEMYPTM
        +     IP++H L + Y F  +    S   +D+H LEV AGS L + GA++ + +P   R++  G L+  WG    I+   S++++   + N++ +YPT+
Subjt:  MLRNKPIPAFHALPKLYKFIHLKPAPSPLTSDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWG----IVWRKSSYNF---NPNNMEMYPTM

Query:  FVAVVLAFLSVRKDVRRIVR
        F+A + AFLS+R DVR+I+R
Subjt:  FVAVVLAFLSVRKDVRRIVR

AT5G11280.1 unknown protein1.2e-3741.35Show/hide
Query:  SKRWATTISGIASFSYFLLIFLQIPLFRVPCRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFIHLKPAPSPLT
        SK W    + +AS  YF+LI  QIPLFRVPCR+  C++P+ +T SQL+ S+IFP P++KALLYPGA+   +  N   P +  +  +Y   ++K A +   
Subjt:  SKRWATTISGIASFSYFLLIFLQIPLFRVPCRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFIHLKPAPSPLT

Query:  SDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYNFNPNNME------MYPTMFVAVVLAFLSVRKDVRRIVRSIKAQ--TNPS
        +DL RLEV+AGSY +V GA +G+++P  GRMS+FG L+ +WG+V  K      P N +      +YPTM +A++ AF  ++ D+R+  R+  A+    P 
Subjt:  SDLHRLEVIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYNFNPNNME------MYPTMFVAVVLAFLSVRKDVRRIVRSIKAQ--TNPS

Query:  WKKPKRKL
            K KL
Subjt:  WKKPKRKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCCAAAAGATGGGCAACCACCATATCTGGCATTGCCTCTTTCTCATATTTTCTTCTCATCTTCCTCCAAATCCCTCTTTTCAGGGTCCCATGCAGAGCGAC
ATCATGCACGACGCCACTAGAATTGACATGCTCCCAATTGTTAGGAAGCGACATATTTCCGGCACCTCTTGTAAAAGCACTTCTCTATCCAGGAGCCATTGCAAAAGCCA
TGCTTAGAAACAAGCCCATCCCAGCTTTTCATGCCTTGCCAAAGCTATACAAGTTTATCCATCTAAAACCAGCACCTTCTCCACTCACATCTGATCTCCATCGCCTTGAG
GTTATTGCAGGAAGTTATTTGGCTGTAGGAGGAGCTATAATGGGCATGGTTAGACCTGGGAGTGGGAGAATGAGTCTGTTTGGATGTCTAGTTGCTATGTGGGGAATTGT
TTGGAGGAAATCTTCATATAATTTCAATCCCAATAATATGGAAATGTATCCAACCATGTTTGTTGCTGTGGTTTTGGCTTTCTTGTCCGTAAGGAAGGATGTGAGAAGAA
TAGTTCGCAGCATCAAAGCTCAAACCAACCCTTCATGGAAGAAGCCCAAACGCAAATTAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCCAAAAGATGGGCAACCACCATATCTGGCATTGCCTCTTTCTCATATTTTCTTCTCATCTTCCTCCAAATCCCTCTTTTCAGGGTCCCATGCAGAGCGAC
ATCATGCACGACGCCACTAGAATTGACATGCTCCCAATTGTTAGGAAGCGACATATTTCCGGCACCTCTTGTAAAAGCACTTCTCTATCCAGGAGCCATTGCAAAAGCCA
TGCTTAGAAACAAGCCCATCCCAGCTTTTCATGCCTTGCCAAAGCTATACAAGTTTATCCATCTAAAACCAGCACCTTCTCCACTCACATCTGATCTCCATCGCCTTGAG
GTTATTGCAGGAAGTTATTTGGCTGTAGGAGGAGCTATAATGGGCATGGTTAGACCTGGGAGTGGGAGAATGAGTCTGTTTGGATGTCTAGTTGCTATGTGGGGAATTGT
TTGGAGGAAATCTTCATATAATTTCAATCCCAATAATATGGAAATGTATCCAACCATGTTTGTTGCTGTGGTTTTGGCTTTCTTGTCCGTAAGGAAGGATGTGAGAAGAA
TAGTTCGCAGCATCAAAGCTCAAACCAACCCTTCATGGAAGAAGCCCAAACGCAAATTAATCTAA
Protein sequenceShow/hide protein sequence
MASSKRWATTISGIASFSYFLLIFLQIPLFRVPCRATSCTTPLELTCSQLLGSDIFPAPLVKALLYPGAIAKAMLRNKPIPAFHALPKLYKFIHLKPAPSPLTSDLHRLE
VIAGSYLAVGGAIMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYNFNPNNMEMYPTMFVAVVLAFLSVRKDVRRIVRSIKAQTNPSWKKPKRKLI