CuGenDBv2

Gene ID	Lag0002928
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	WD repeat-containing protein 43
Genome location	chr4:46754508..46757948
RNA-Seq Expression	Lag0002928
Synteny	Lag0002928
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0005730 - nucleolus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR007148 - Small-subunit processome, Utp12 IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily IPR015943 - WD40/YVTN repeat-like-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593430.1 WD repeat-containing protein 43, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-281

83.91

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE
        MK E  KSPPITAFT +GD+LAILSSNGTVK        IW+TSDGSLLAEWKDP+GKTD GYSC+ACCFVGK RKNSSC+IA+GT+ GDVL VNASSGE
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE

Query:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI
        TKWVSAGCHLGGVIGLSFA+KGRR+HTVGSNG+AF+M+ ETGSII EFKASKKSISSSAFSL+EKY+AVAGKKLKILSTDNG ELM HPDKLGPVKL SI
Subjt:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI

Query:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG
        SDDAK IITSE GAKH+QVWWCDMSAGKLSRGPVLSMKH PFVSECRNI N EDSIVVLSVSVSGVAYLWKLKFLSED+ +PTKVTVK N+++SAEENHG
Subjt:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG

Query:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD
        SAKKNRISV++S IQGL DNEVSVLVTHGSMDLPQH+V NIGY AKED +   EK           +GPH I+QAVT+P SKKSKKKRAA DLDS  AGD
Subjt:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD

Query:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
        VSDVGN + S+VLFNDDLNEPTMG+KL SLNLE QNE+E  EQ EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
Subjt:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK

Query:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE
        LLH+LISIIQSRGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE +ENDAIVPIIYEEDDSDDKE
Subjt:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE

Query:  -SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE
         SGDEMETDEE   VEV AF+DLSAGEVDDDMSE
Subjt:  -SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE

XP_008461080.1 PREDICTED: WD repeat-containing protein 43 [Cucumis melo]

1.2e-282

82.62

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE
        MKKEILKSPPITAFT DGD+LAI SSNGT+K        IWST DGSLLAEWKD +GK D GYSCMACC +GK RK+S C++A+GT+NGDVLAVNAS+GE
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE

Query:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI
         KWVS GCH GGVIGLSFAN+GRR+HTVGSNGMA EMDTETG+IIKEFKASKKSISSSAFSL+EKY+AVAGKKLKILS D+GDEL+ HPDKL PVKLVSI
Subjt:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI

Query:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG
        SDDAK I+TSELGAKHLQVWWCDMSAGK SRGPVLSM H PFVSECRN+ N+EDS+VVLSVSVSG AYLWKLK LSEDE  PTKV+VK ND QSAEENHG
Subjt:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG

Query:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD
        SAKKNR+SV+AS+I  + DNEVSVLVTHGS+DLPQHS+ +IGY+ KED +T HE KTLQQND  SEQGPH IEQ V TP SKKSKKKRAA DLDS TAGD
Subjt:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD

Query:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
        VSDVGNG+ASDV+FNDDLNEP+MGEKL SLNL +QNE+ GREQE PSVP IPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLK
Subjt:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK

Query:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE
        LLHS+IS IQSRGAILVCALPWLRGLLLQHAS+IMSQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLDEE ++NDAIVPIIYEE+DSD+ E
Subjt:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE

Query:  SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE
        +GDEMETDE++E  EV AF+DLSAGEVDDDMSE
Subjt:  SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE

XP_022150139.1 WD repeat-containing protein 43 [Momordica charantia]

2.0e-290

86.73

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGK--NRKNSSCVIAMGTDNGDVLAVNASS
        MKKE+LKSPPITAFT DGD+LAILS N TVK        IWS  DGSLLAEWKD EGKTDVGYSC+ACCFV K   +K SSCVIA+GTDNGDVLAVNASS
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGK--NRKNSSCVIAMGTDNGDVLAVNASS

Query:  GETKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLV
        GETKWVSAGCH+GGVIGLSFANKGRR+ TVGSNGMA EMDTETG+IIKEFKASKKSISSSAFS +EKY+AVAGKKL+ILSTDNGDELM H DKLGPVKLV
Subjt:  GETKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLV

Query:  SISDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEEN
        SISDDAKAIITSE GAKHLQVWWCDMSA KLSRGPVLSMKH PFVSEC+NI NEEDSIVVLSVSVSGVAY+W+LK LSEDE SP KVTVK ND QSAEEN
Subjt:  SISDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEEN

Query:  HGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTA
        HGSAKKNRISVIASRI G  DNEVSVLVTHGSMD PQ S+FNIGYS KED++T HEKKTLQQNDD S QGPH IEQAVTTP SKKSKKKRAA D+DSLTA
Subjt:  HGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTA

Query:  GDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDV
        GDVS VGNG+ASDVLFNDD+NEPTMGEKL SLNL +Q+E+E  EQ EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDV
Subjt:  GDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDV

Query:  LKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYE-EDDSD
        LKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFLYTGVLDEEVD+NDAIVPIIYE EDDSD
Subjt:  LKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYE-EDDSD

Query:  DKESGDEMET--DEENEEVEVAFEDLSAGEVDD
        D+ESGDEMET  DEE EE E AF DLSAGEVDD
Subjt:  DKESGDEMET--DEENEEVEVAFEDLSAGEVDD

XP_023513462.1 WD repeat-containing protein 43 [Cucurbita pepo subsp. pepo]

2.2e-281

83.6

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE
        MK E+ KSPPITAFT +GD+LAILSSNGTVK        IW+TSDGSLLAEWKDP+G+TD GYSC+ACCFVGK RKNSSC+IA+GT+ GDVLAVNASSGE
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE

Query:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI
         KWVSAGCHLGGVIGLSFA+KGRR+HTVGSNGMAF+M+ ETGSII EFKASKKSISSSAFS +EKY+AVAGKKLKILSTDNG ELM HPDKLGPVKL SI
Subjt:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI

Query:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG
        S+DAK IITSE GAKH+QVWWCD+SAGKLSRGPVLSMKH PFVSECRNI N EDSIVVLSVSVSGVAYLWKLKFLSE + SPTKVTVK N+++SAEE+HG
Subjt:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG

Query:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD
        SAKKNRISVI+S IQGL DNEVSVLVTHGSMDLPQH+V NIGY AKED++   EK           +GPH IEQAVT+P SKKSKKKRAA DLDS TAGD
Subjt:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD

Query:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
        VSDVGN + S+VLFNDDLNEPTMG+KL SLNLE+QNE+E  EQ EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
Subjt:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK

Query:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE
        LLH+LISIIQSRGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD+E +ENDAIVPIIYEEDDSDDKE
Subjt:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE

Query:  -SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE
         SGDEMETDEE   VEV AF+DLSAGEVDDDMSE
Subjt:  -SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE

XP_038899613.1 WD repeat-containing protein 43 [Benincasa hispida]

5.0e-297

85.6

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE
        MKKEILKSPPITAFT DGD+LAILSSNGT+K        IWST DGSLLAEWKDP+GK DVGYSCMACCF GK RKNS CV+A+GT++GDVLAVNAS+GE
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE

Query:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI
         KWVSAGCHLGGVIGLSFANKGRR+H VGSNG   EMDTETG+IIKEFKASKKSISSS+FSL+EKY+AVAGKKLKILS D+GDELM HPDKLGPVKLVS+
Subjt:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI

Query:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG
        SDDAK IITSELGAKHLQVWWCDMSAGKLSRGPVLSMKH PFVSECRN+ N+ED++VVLSVSVSGVAYLWKLK LSEDE SPTKV+VK ND QSAEENHG
Subjt:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG

Query:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD
        SAKKNR+SVIASRI G+ DNEVSVLVTHGSMDLPQHS+F+IGYS KED++T    KTLQQNDD SEQGPH +EQ V TP SKK KKKRAA DLDSLT GD
Subjt:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD

Query:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKL
        +SDVGNG+ASDV+FNDDLNEP+MGEKL SLNL +QNE+EGRE+EPSVPAIPPSADSVQVLLKQALHA+DR LLLECLYTKDDKVISKSIAQLNSSDVLKL
Subjt:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKL

Query:  LHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKES
        LHSLIS IQSRGAILVC LPWLRGLLLQHAS+IMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLY+GVLDEEVDENDAIVPIIYEEDDSDDKES
Subjt:  LHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKES

Query:  GDEMETDEENEEVEV-AFEDLSAGEVDDDMSE
        GDEMETDE+ E  EV AF+DLSAGEVDDDMSE
Subjt:  GDEMETDEENEEVEV-AFEDLSAGEVDDDMSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBW9 Utp12 domain-containing protein

1.2e-275

80.88

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE
        MK EILKS PI AFT DGD+LAI+SSNGT+K        IWST DGSLLAEWKD +GK D GYSCMACCF+GK RK+S CV+A+GT++GDVLAVNAS+GE
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE

Query:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI
         KWVSAGCH GGVIGLSFANKG R+ TVGSNGMA EMDTETG+IIKEFKASKKSISSSAFSL+E+Y+ VAGKKLKILSTD+GDEL+ HPDKLGPVKLVS+
Subjt:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI

Query:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG
        SDDAK IITSELGAKHLQVWWC++SAGK SRGP+LSMKH PFVSECRN+ N+EDS+VVLSVSVSG AYLWKLK LSEDE +PTKV+VK ND QSAEENHG
Subjt:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG

Query:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD
        SAKKNR SV+ASRI G+ DNEVSVLVTHGS+DLPQH++ +IGY+ KED +T HE KTLQQND  SEQGPH IEQ V TP SKKSKKKRAA +LDSLTAGD
Subjt:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD

Query:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
        VSDVGNG+ SDVLFNDDLNEP+MGEKL SLNL +QN++ GREQE PSVP IPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL 
Subjt:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK

Query:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE
        LLH+LIS IQSRGAILVCALPWLR L+LQHAS+IMSQESSLLALNSLYQLIESR STFQSALLLSSSLDFLYT VLD+E ++ND IVPIIYEE+DSD+ E
Subjt:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE

Query:  SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE
        +GDEMET+E++E  EV AF+DLSAGEVDDDMSE
Subjt:  SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE

A0A1S3CDX9 WD repeat-containing protein 43

5.7e-283

82.62

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE
        MKKEILKSPPITAFT DGD+LAI SSNGT+K        IWST DGSLLAEWKD +GK D GYSCMACC +GK RK+S C++A+GT+NGDVLAVNAS+GE
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE

Query:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI
         KWVS GCH GGVIGLSFAN+GRR+HTVGSNGMA EMDTETG+IIKEFKASKKSISSSAFSL+EKY+AVAGKKLKILS D+GDEL+ HPDKL PVKLVSI
Subjt:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI

Query:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG
        SDDAK I+TSELGAKHLQVWWCDMSAGK SRGPVLSM H PFVSECRN+ N+EDS+VVLSVSVSG AYLWKLK LSEDE  PTKV+VK ND QSAEENHG
Subjt:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG

Query:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD
        SAKKNR+SV+AS+I  + DNEVSVLVTHGS+DLPQHS+ +IGY+ KED +T HE KTLQQND  SEQGPH IEQ V TP SKKSKKKRAA DLDS TAGD
Subjt:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD

Query:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
        VSDVGNG+ASDV+FNDDLNEP+MGEKL SLNL +QNE+ GREQE PSVP IPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLK
Subjt:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQE-PSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK

Query:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE
        LLHS+IS IQSRGAILVCALPWLRGLLLQHAS+IMSQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLDEE ++NDAIVPIIYEE+DSD+ E
Subjt:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE

Query:  SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE
        +GDEMETDE++E  EV AF+DLSAGEVDDDMSE
Subjt:  SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE

A0A6J1D938 WD repeat-containing protein 43

9.8e-291

86.73

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGK--NRKNSSCVIAMGTDNGDVLAVNASS
        MKKE+LKSPPITAFT DGD+LAILS N TVK        IWS  DGSLLAEWKD EGKTDVGYSC+ACCFV K   +K SSCVIA+GTDNGDVLAVNASS
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGK--NRKNSSCVIAMGTDNGDVLAVNASS

Query:  GETKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLV
        GETKWVSAGCH+GGVIGLSFANKGRR+ TVGSNGMA EMDTETG+IIKEFKASKKSISSSAFS +EKY+AVAGKKL+ILSTDNGDELM H DKLGPVKLV
Subjt:  GETKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLV

Query:  SISDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEEN
        SISDDAKAIITSE GAKHLQVWWCDMSA KLSRGPVLSMKH PFVSEC+NI NEEDSIVVLSVSVSGVAY+W+LK LSEDE SP KVTVK ND QSAEEN
Subjt:  SISDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEEN

Query:  HGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTA
        HGSAKKNRISVIASRI G  DNEVSVLVTHGSMD PQ S+FNIGYS KED++T HEKKTLQQNDD S QGPH IEQAVTTP SKKSKKKRAA D+DSLTA
Subjt:  HGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTA

Query:  GDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDV
        GDVS VGNG+ASDVLFNDD+NEPTMGEKL SLNL +Q+E+E  EQ EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDV
Subjt:  GDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDV

Query:  LKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYE-EDDSD
        LKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFLYTGVLDEEVD+NDAIVPIIYE EDDSD
Subjt:  LKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYE-EDDSD

Query:  DKESGDEMET--DEENEEVEVAFEDLSAGEVDD
        D+ESGDEMET  DEE EE E AF DLSAGEVDD
Subjt:  DKESGDEMET--DEENEEVEVAFEDLSAGEVDD

A0A6J1HJF3 WD repeat-containing protein 43 isoform X1

5.4e-281

83.75

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE
        MK E  KSPPITAFT +GD+LAILSSNGTVK        IW+TSDGSLLAEWKDP+GKTD GYSC+ACCFVGK RKNSSC+IA+GT+ GDVL VNASSGE
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE

Query:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI
        TKWVSAGCHLGGVIGLSFA+KGRR+HTVGSNG+AF+M+ ETGSII EFKASKKSISSSAFSL+EKY+AVAGKKLKILSTD+G ELM HPDKLGPVKL SI
Subjt:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI

Query:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG
        SDDAK IITSE GAKH+QVWWCDMSAGKLSRGPVLSMKH PFVSECRNI N EDSIVVLSVSVSGVAYLWKLKFLSED+ +PTKVTVK N+++SAEENHG
Subjt:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG

Query:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD
        SAKKNRISV++S IQGL DNEVSVLVTHGSMDLPQH+V NIGY AKED +   EK           +GPH I+QAVT+P SKKSKKKRAA DLDS  AGD
Subjt:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD

Query:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
        VSDVGN + S+VLFNDDLNEPTMG+KL SLNLE QNE+E  EQ EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
Subjt:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK

Query:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE
        LLH+LISIIQSRGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE +ENDAIVPIIYEEDDSDDKE
Subjt:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE

Query:  -SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE
         SGDEMETDEE   VEV AF+DLSAGEVDDDMSE
Subjt:  -SGDEMETDEENEEVEV-AFEDLSAGEVDDDMSE

A0A6J1KMD0 WD repeat-containing protein 43

2.1e-277

82.36

Show/hide

Query:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE
        MK E+ KSPPITAFT +GD+LAILSSNGTVK        IW TSDGSLLAEWKDP+GKTD GYSC+ACCFVGK RKNSSC+IA+GT+ GDVLAVNASSGE
Subjt:  MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGE

Query:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI
        TKWVSAGCHLGG+IGLSFA+KGRR+HT+GSNGMAF+M+ ETGSII EFKASKKSISSSAFSL+EKY+AVAGKKLKILSTDNG ELM HPDKLGPVKL SI
Subjt:  TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSI

Query:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG
        SDDAK IITSE GAKH+QVWWCDMSAGKLSRGPVLSMKH PF+SECRN+ N EDSIVVLSVSVSGVAYLWKLKFLSED+ SPTKVTVK N+++SAEENHG
Subjt:  SDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHG

Query:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD
        SAKKNRISV++S IQGL DNEVSVLVTHGSMDLPQH+V NI                        ++GPH IEQAVT+P SKKSKKKRAA DLDS TAGD
Subjt:  SAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGD

Query:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
        VSDVGN + S+VLFNDDLNEPTMG+KL +LNLE QNE+E  EQ EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
Subjt:  VSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQ-EPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK

Query:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE
        LLH+LISIIQSRGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD E +ENDAIVPIIYEEDDSDDKE
Subjt:  LLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKE

Query:  -SGDEMETDEE--NEEVEVAFEDLSAGEVDDDMSE
         SGDEMETDEE    EVE AF+DLSAGEVDDDMSE
Subjt:  -SGDEMETDEE--NEEVEVAFEDLSAGEVDDDMSE

SwissProt top hits

e value

%identity

Alignment

Q15061 WD repeat-containing protein 43

1.3e-05

21.66

Show/hide

Query:  NSSCVIAMGTDNGDVLAVNASSGE--TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKL
        N + ++A+GT  G +L  +   GE  +K +S G H   V  + +      +++   +    E + +T  +  ++K    S+SS   S + K +  AG+ +
Subjt:  NSSCVIAMGTDNGDVLAVNASSGE--TKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKL

Query:  KILSTDNGD---ELMAHPDKLGPVKLVSISDDAKA----------IITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSV
        K+   +  +       H   +  +   +I    ++           ++  +  + L VW       + S     ++   P   +     N+E+ + +  V
Subjt:  KILSTDNGD---ELMAHPDKLGPVKLVSISDDAKA----------IITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSV

Query:  SVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQN
           G  +L++            K       IQ A    G  KK+    I     G   +++S+L+ +GS   P  ++  +  +++       E       
Subjt:  SVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQN

Query:  DDSSEQGPHVIEQAVT---TPTSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQEPSVPAIPPSADSVQ
        D S+   P V E A+T   TP    S+ K     +    A            +       NE ++ E+L +++++   + +   Q  S P          
Subjt:  DDSSEQGPHVIEQAVT---TPTSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQEPSVPAIPPSADSVQ

Query:  VLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQ
        VLL Q L ++D  +L + L T++  +I K++ ++    ++ LL  L   +Q      V  + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ
Subjt:  VLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQ

Query:  SALLLSSSLDFLYTGVLDEEVDENDAI----VPIIYEEDDSDDKESGDEMETDEENEEVEVAFEDLSAGEVDDDMSE
            L   L  L T V   E  +          ++YEE+ S++ ES DE+  D+++E+     E+ S  E D+D+ E
Subjt:  SALLLSSSLDFLYTGVLDEEVDENDAI----VPIIYEEDDSDDKESGDEMETDEENEEVEVAFEDLSAGEVDDDMSE

Q6ZQL4 WD repeat-containing protein 43

6.4e-05

20.67

Show/hide

Query:  KNSSCVIAMGTDNGDVLAVNASSGET-KWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKL
        K+ + ++A+GT  G +L  +   GE    +++G H   V  + +      +++   +    E  T+T  +  ++K    S+SS   S + K +  AG+ +
Subjt:  KNSSCVIAMGTDNGDVLAVNASSGET-KWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKL

Query:  KILSTDNGD---ELMAHPDKLGPVKLVSI-------SDDAKAI--ITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVS
        K+   +  +       H   +  ++  +I       SD    +  ++  +  + L VW       + S     ++   P   +     N+E+ + +  V 
Subjt:  KILSTDNGD---ELMAHPDKLGPVKLVSI-------SDDAKAI--ITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVS

Query:  VSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQND
          G  +L++            K       IQ A    G  KK     I         +++S+L+ +G+   P  ++  +  ++K       +     + D
Subjt:  VSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQND

Query:  DSSEQGPHVIEQAVT---TPTSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQEPSVPAIPPSADSVQV
         S+   P  +E A+T   TP    S+ K     +    A           ++        E T+ E+L +++L+ +  ++  +            +S  V
Subjt:  DSSEQGPHVIEQAVT---TPTSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEGREQEPSVPAIPPSADSVQV

Query:  LLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQS
        LL Q L ++D  +L + L TK+  +I +++ ++    V+ LL  L   +Q         + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ 
Subjt:  LLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQS

Query:  ALLLSSSLDFLYTGVLDEEVDEN----DAIVPIIYEE--------------------DDSDDKESGDEMETDEENEEVEVAFEDLSAGEVDDDMS
           L   L  L T V   E  +          ++YEE                    D+ +DK+S  +   DE+NEE +   ED    E D ++S
Subjt:  ALLLSSSLDFLYTGVLDEEVDEN----DAIVPIIYEE--------------------DDSDDKESGDEMETDEENEEVEVAFEDLSAGEVDDDMS

Arabidopsis top hits

e value

%identity

Alignment

AT1G15420.1 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).

1.5e-49

Show/hide

Query:  SSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLEN----QNEEEGREQEPSVPAIPPSADSVQV
        SS+    + +  +     KK  KKRA  + D  +  D     + +   VL +D LNEPT+G+KLESL+L N     +EE  R+  P     PP+A SV V
Subjt:  SSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLEN----QNEEEGREQEPSVPAIPPSADSVQV

Query:  LLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQS
        LL+QALHADDR+LLL+CLY +D++VI+ S+A+LNS++VLKLL++L+ I+QSRGAIL C +PW++ LLL H+S IMSQESSLLALN++YQLIESR+ST  +
Subjt:  LLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQS

Query:  ALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSD-DKESGDE--METDEE-NEEVEVAFEDLSAGEVDDDMSE
        A+ +SS LD L    LDEE DE     P+IYE+ DSD D+E G E  METDEE ++  + A + ++  E  DDMS+
Subjt:  ALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSD-DKESGDE--METDEE-NEEVEVAFEDLSAGEVDDDMSE

AT5G11240.1 transducin family protein / WD-40 repeat family protein

6.3e-32

25.46

Show/hide

Query:  ITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKD-------------PEGKTDVGYSCMACCFV--GKNRKNSSCVIAMGTDNGDVLAVN
        +T+F+   D+LA+ + +G +K        IW T  G +  E+ D              +G   V Y+CM    +   K RK  + V+ +GT  GDVLA++
Subjt:  ITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKD-------------PEGKTDVGYSCMACCFV--GKNRKNSSCVIAMGTDNGDVLAVN

Query:  ASSGETKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPV
         +SG+ KW  + CH GGV  +S + K   +++ G++GM  ++D  +G++I++FKAS K++SS   S + K +  A  +LK  +  +  ++       G V
Subjt:  ASSGETKWVSAGCHLGGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPV

Query:  KLVSISDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSE-DEASPTKVTVKGNDIQS
        + V+ ++D K +++S +G +++ VW  D  A K S   VL+++H P   +     NE+  + VL++S  GV Y W    + E   A+PTKV      + +
Subjt:  KLVSISDDAKAIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSE-DEASPTKVTVKGNDIQS

Query:  AEENHGSAKKNRISVIASRIQG-LRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDD----SSEQGPHVIEQAVTTPTSKKSKKKRA
        A+ +    K +   + A+++QG L+       +  G +  P                   +K  LQ  +D    +S+ G   I   +T   SK SK++  
Subjt:  AEENHGSAKKNRISVIASRIQG-LRDNEVSVLVTHGSMDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDD----SSEQGPHVIEQAVTTPTSKKSKKKRA

Query:  AFDLDSLTAGDVSDVGNGNASDVLFN----DDLNEPTMGEKLESLNLENQNEEEGREQEPSVPAIPPSADSVQVLLKQALHAD-DRALLLECLYTK---D
                   V+ +   +A D L       DL+E     +L S + +    ++         ++     S+ +L     H +   A +++    K    
Subjt:  AFDLDSLTAGDVSDVGNGNASDVLFN----DDLNEPTMGEKLESLNLENQNEEEGREQEPSVPAIPPSADSVQVLLKQALHAD-DRALLLECLYTK---D

Query:  DKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVD
         K +  ++  +  S   K L +L ++ Q+R       LPW+  +++ H+  IMSQE  +   LN+L ++ +SR +  Q  L LS  L  L T  +++   
Subjt:  DKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEVD

Query:  ENDAIVPIIYEEDDSDDKESGDEMETDEENE-EVEVAFEDLSAGEVDDDMSE
            I     E D+S+D+E   E     EN+ E +++ +D    + DD + E
Subjt:  ENDAIVPIIYEEDDSDDKESGDEMETDEENE-EVEVAFEDLSAGEVDDDMSE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGAAGGAAATCCTTAAATCGCCTCCCATCACAGCTTTCACTCTCGACGGCGACTTTCTAGCCATCTTGTCATCCAATGGAACTGTTAAGGCAAGCTCTTTCTCTCT
CTCTATCATTTGGAGTACTAGTGATGGGAGTTTACTGGCAGAATGGAAGGATCCTGAGGGAAAAACTGATGTTGGTTATTCATGTATGGCCTGCTGTTTTGTGGGGAAGA
ATCGTAAAAACAGTTCTTGTGTAATTGCTATGGGTACCGACAATGGGGATGTGTTGGCTGTAAATGCTTCTAGCGGTGAGACGAAGTGGGTTTCTGCTGGTTGCCATCTT
GGTGGAGTTATTGGCCTTTCTTTTGCGAACAAAGGCCGTAGAGTGCATACGGTTGGAAGTAATGGAATGGCGTTCGAGATGGACACTGAAACAGGAAGCATTATCAAGGA
GTTCAAAGCTTCTAAAAAATCAATCTCCTCTTCAGCCTTTTCACTTAATGAGAAGTACGTAGCTGTAGCTGGCAAAAAGTTGAAGATTTTAAGCACAGATAATGGGGATG
AGCTTATGGCACACCCTGATAAATTGGGTCCTGTGAAGCTTGTTTCTATATCTGATGATGCTAAAGCAATAATTACATCAGAACTTGGAGCCAAACATCTTCAAGTGTGG
TGGTGTGATATGAGTGCTGGAAAACTTAGTAGAGGTCCTGTTCTGTCGATGAAGCATCATCCATTTGTTTCTGAATGCAGAAATATTTGCAATGAAGAAGATAGCATAGT
TGTCTTGTCAGTATCAGTATCAGGTGTAGCTTATTTATGGAAATTAAAGTTCCTATCAGAAGACGAGGCTAGTCCAACTAAAGTCACTGTTAAAGGTAATGACATCCAAT
CAGCCGAGGAAAACCATGGAAGTGCTAAGAAAAATCGAATTTCTGTCATTGCTTCCAGAATACAAGGTTTAAGAGACAATGAAGTGTCAGTTCTTGTTACTCATGGCTCC
ATGGACCTACCACAACATAGTGTTTTTAATATTGGTTATTCCGCAAAGGAAGATATAGATACTGTGCATGAGAAAAAGACACTCCAACAAAATGATGATTCTTCTGAGCA
AGGTCCCCATGTGATCGAACAAGCAGTTACTACACCTACAAGTAAGAAAAGCAAAAAGAAAAGAGCAGCATTTGATCTTGATAGTCTGACAGCTGGAGATGTCAGTGACG
TTGGCAATGGCAATGCTTCCGATGTTCTATTTAACGATGATTTAAATGAGCCAACCATGGGAGAGAAACTTGAAAGTTTGAATTTGGAGAACCAGAATGAAGAGGAAGGT
CGTGAACAAGAACCATCCGTCCCTGCGATACCACCAAGTGCAGACTCTGTTCAGGTTTTGCTTAAGCAAGCACTACATGCAGACGATCGTGCCCTTTTGCTAGAATGCTT
ATATACCAAGGATGATAAGGTTATTTCAAAATCAATAGCACAGTTAAATTCATCTGATGTTCTCAAGCTTTTACACTCTCTGATATCCATTATCCAATCGAGAGGGGCCA
TTCTTGTATGCGCCCTCCCTTGGCTGAGAGGTTTACTTCTCCAACATGCTAGTAGAATAATGTCTCAAGAATCTTCTCTACTCGCCTTAAATTCTCTATATCAGCTCATT
GAGTCTAGAATTTCAACTTTCCAATCCGCTCTACTGCTATCGAGTAGCTTAGACTTCCTTTACACAGGGGTCCTTGACGAGGAGGTGGACGAAAATGATGCCATTGTGCC
CATTATTTACGAGGAGGACGATAGCGACGATAAGGAATCAGGAGACGAAATGGAAACTGATGAAGAGAATGAAGAAGTAGAAGTAGCCTTTGAGGATCTCAGTGCTGGTG
AAGTGGATGATGACATGAGTGAATGA

mRNA sequence

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Protein sequence

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MKKEILKSPPITAFTLDGDFLAILSSNGTVKASSFSLSIIWSTSDGSLLAEWKDPEGKTDVGYSCMACCFVGKNRKNSSCVIAMGTDNGDVLAVNASSGETKWVSAGCHL
GGVIGLSFANKGRRVHTVGSNGMAFEMDTETGSIIKEFKASKKSISSSAFSLNEKYVAVAGKKLKILSTDNGDELMAHPDKLGPVKLVSISDDAKAIITSELGAKHLQVW
WCDMSAGKLSRGPVLSMKHHPFVSECRNICNEEDSIVVLSVSVSGVAYLWKLKFLSEDEASPTKVTVKGNDIQSAEENHGSAKKNRISVIASRIQGLRDNEVSVLVTHGS
MDLPQHSVFNIGYSAKEDIDTVHEKKTLQQNDDSSEQGPHVIEQAVTTPTSKKSKKKRAAFDLDSLTAGDVSDVGNGNASDVLFNDDLNEPTMGEKLESLNLENQNEEEG
REQEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLI
ESRISTFQSALLLSSSLDFLYTGVLDEEVDENDAIVPIIYEEDDSDDKESGDEMETDEENEEVEVAFEDLSAGEVDDDMSE

Lag0002928 (gene) of Sponge gourd (AG-4) v1 genome