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Lag0002931 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002931
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description39S ribosomal protein L41-A, mitochondrial
Genome locationchr4:46771553..46773350
RNA-Seq ExpressionLag0002931
SyntenyLag0002931
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135839.1 39S ribosomal protein L41-A, mitochondrial [Cucumis sativus]1.8e-4193.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+KTSD++ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS

XP_008461075.1 PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo]6.7e-4192.47Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+ TSD++ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]6.0e-4294.62Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP EVKTS++SES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS

XP_022982189.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima]1.1e-4092.47Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE KTS++ ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]9.3e-4396.77Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSD++ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS

TrEMBL top hitse value%identityAlignment
A0A0A0KBX4 Uncharacterized protein8.5e-4293.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+KTSD++ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS

A0A1S3CEC5 39S ribosomal protein L41-A, mitochondrial-like3.2e-4192.47Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+ TSD++ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS

A0A2C9U139 Uncharacterized protein1.6e-4091.3Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVK
        M LGLILG+GRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFKLKPYVSQCP EVKT++SSE+ K
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVK

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial2.9e-4294.62Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP EVKTS++SES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS

A0A6J1J3V5 39S ribosomal protein L41-A, mitochondrial-like5.5e-4192.47Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE KTS++ ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial5.9e-0851.92Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6DJI4 39S ribosomal protein L41-A, mitochondrial2.0e-0844.59Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6INF3 39S ribosomal protein L41-B, mitochondrial3.5e-0844.59Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q8IXM3 39S ribosomal protein L41, mitochondrial8.6e-0751.85Show/hide
Query:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR +   KG+  K  GF T    +V + E +P +VVPDLT FKLKPYVS
Subjt:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q9CQN7 39S ribosomal protein L41, mitochondrial5.9e-0850Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L279.9e-3576.34Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV-KTSDSSESVK
        M LGL+ G+GR  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPNYVVPDLT FKLKPYVSQCP++V KT++S+E+ K
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV-KTSDSSESVK

AT5G39800.1 Mitochondrial ribosomal protein L274.3e-3879.78Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVK
        GL++G+GR+ RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCPI+V T++S+E+ K
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVK

AT5G40080.1 Mitochondrial ribosomal protein L279.6e-3878.65Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVK
        GL++G+GR+ RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCP++V T++S+E+ K
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGGACTGATTTTGGGACTCGGCAGAGCAATGCGGAGGAAGCGTACGTCTTCTCTGGACATCCTTTCCTCCAAAAGAGCTCCACGAGATTACTATAAGGGCAA
GAATTGCAAACCTACTGGTTTTCATACGCGGAAAGGTGGATACGTAGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTT
ATGTATCTCAATGTCCAATAGAAGTCAAGACAAGTGACAGCAGCGAATCAGTTAAATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGGGACTGATTTTGGGACTCGGCAGAGCAATGCGGAGGAAGCGTACGTCTTCTCTGGACATCCTTTCCTCCAAAAGAGCTCCACGAGATTACTATAAGGGCAA
GAATTGCAAACCTACTGGTTTTCATACGCGGAAAGGTGGATACGTAGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTT
ATGTATCTCAATGTCCAATAGAAGTCAAGACAAGTGACAGCAGCGAATCAGTTAAATCATAA
Protein sequenceShow/hide protein sequence
MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDSSESVKS