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Lag0002969 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002969
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionthionin-like protein 2
Genome locationchr4:47092199..47092671
RNA-Seq ExpressionLag0002969
SyntenyLag0002969
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575553.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]6.0e-3060.36Show/hide
Query:  MKSIVILCLVLSLVA---GKSTAYVG--ECYVGCFSPCLSSVVDCAVCIGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD
        MK++++ CLVLS V     + T YVG   CY GC + C  S   CA+CIGKC+I+VES+PMQ  HMDNRYFCKLGCSTS C K L N HP+EK++KGCV+
Subjt:  MKSIVILCLVLSLVA---GKSTAYVG--ECYVGCFSPCLSSVVDCAVCIGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD

Query:  SCSQTCTNTMD
        SCS TCTN M+
Subjt:  SCSQTCTNTMD

KAG6575558.1 hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2765.56Show/hide
Query:  TAYVG--ECYVGCFSPCLSSVVDCAVCIGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTNTMD
        T YVG   CY GC + C  S   CA+CIGKC+I+VES+PMQ  HMDNRYFCKLGCSTS C K L N HP+EK++KGCV+SCS TCTN M+
Subjt:  TAYVG--ECYVGCFSPCLSSVVDCAVCIGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTNTMD

KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]5.5e-2355.24Show/hide
Query:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPC-LSSVVDCAVCIGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS
        MKSIV++C +LSLVAG+STA  G+CY  CF  C ++  V    C GKC+   +   S+P  L H+D  YFCKLGC+TSLCTKF T   P EKKV+ CV+S
Subjt:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPC-LSSVVDCAVCIGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS

Query:  CSQTC
        CS+TC
Subjt:  CSQTC

KAG7014099.1 hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3061.26Show/hide
Query:  MKSIVILCLVLSLVA---GKSTAYVG--ECYVGCFSPCLSSVVDCAVCIGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD
        MK++++ CLVLS V     + T YVG   CY GC + CL S   CA+CIGKC+I+VES+PMQ  HMDNRYFCKLGCSTS C K L N HP+EK++KGCV+
Subjt:  MKSIVILCLVLSLVA---GKSTAYVG--ECYVGCFSPCLSSVVDCAVCIGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD

Query:  SCSQTCTNTMD
        SCS TCTN M+
Subjt:  SCSQTCTNTMD

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]3.2e-2354.29Show/hide
Query:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPC-LSSVVDCAVCIGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS
        MKS+V++C +LSLVAG+STA  G+CY  CF  C ++  V    C GKC+   + + S+P  L H+D  YFCKLGC+TSLCTKF T   P EKKV+ CV+S
Subjt:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPC-LSSVVDCAVCIGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS

Query:  CSQTC
        CS+TC
Subjt:  CSQTC

TrEMBL top hitse value%identityAlignment
A0A0A0KC18 Uncharacterized protein6.3e-1751.09Show/hide
Query:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPC-LSSVVDCAVCIGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEK
        MKS+V++C +LSLVAG+STA  G+CY  CF  C ++  +    C  KC+   + + SSPM L +MD  YFCKLGC+TS CTKF T K P +K
Subjt:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPC-LSSVVDCAVCIGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEK

A0A1S3CDB8 beta-hordothionin-like5.2e-1949.61Show/hide
Query:  MKSIVILCLVLS-LVAGKSTAY--VGE--------------CYVGC-FSPCLSSVVDCAVCIGKC-IITVESS-PMQLKHMDNRYFCKLGCSTSLCTKFL
        MKSI +LCL+LS LV GKS     VG               CY+ C  + C   V  CAVC+GKC ++  ESS   +   MDN  FCK+GC+TSLCTKF 
Subjt:  MKSIVILCLVLS-LVAGKSTAY--VGE--------------CYVGC-FSPCLSSVVDCAVCIGKC-IITVESS-PMQLKHMDNRYFCKLGCSTSLCTKFL

Query:  --TNKHPDEKKVKGCVDSCSQTCTNTM
           N+H DEK+VKGCV SCSQ CT++M
Subjt:  --TNKHPDEKKVKGCVDSCSQTCTNTM

A0A6J1DDL8 thionin-like protein 24.0e-1952.83Show/hide
Query:  IVILCLVLSLVAGKSTAYVGECYVGCFSPCLSS----VVDCAV-CIGKCIITVESSPMQLK-HMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSC
        ++++ LVLSLVAGKSTA  G+CY  CF  C  +    V  CA  C+  C+    S+       +D RYFCKLGC+TSLCTKF T K P EKKV  CVDSC
Subjt:  IVILCLVLSLVAGKSTAYVGECYVGCFSPCLSS----VVDCAV-CIGKCIITVESSPMQLK-HMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSC

Query:  SQTCTN
        SQ C N
Subjt:  SQTCTN

A0A6J1KDK0 thionin-like protein 21.6e-2354.29Show/hide
Query:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPC-LSSVVDCAVCIGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS
        MKS+V++C +LSLVAG+STA  G+CY  CF  C ++  V    C GKC+   + + S+P  L H+D  YFCKLGC+TSLCTKF T   P EKKV+ CV+S
Subjt:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPC-LSSVVDCAVCIGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS

Query:  CSQTC
        CS+TC
Subjt:  CSQTC

A0A6P5X8X4 thionin-like protein 24.8e-1748.11Show/hide
Query:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPCL----SSVVDCAV-CIGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD
        M S++++CLVL L+ G+STA    CY GCF  C+    +S   CA+ C+ KC++  ++SP+     D +YFCKLGCSTSLCT   + + P E KV+ CVD
Subjt:  MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPCL----SSVVDCAV-CIGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD

Query:  SCSQTC
        SCS+TC
Subjt:  SCSQTC

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 26.3e-0628.44Show/hide
Query:  SIVILCLVLSLVAGKSTAYV--GECYVGCFSPC-----LSSVVDCA-VCIGKCIITVESSPMQLKHMD-NRYFCKLGCSTSLCTKFLTNKHPDEKKVKGC
        +++I+ ++ +L+A  +   +   ECY  C   C         + C   C  +C+       +   ++D + YFCKLGC+T  C    + ++P+ ++V  C
Subjt:  SIVILCLVLSLVAGKSTAYV--GECYVGCFSPC-----LSSVVDCA-VCIGKCIITVESSPMQLKHMD-NRYFCKLGCSTSLCTKFLTNKHPDEKKVKGC

Query:  VDSCSQTCT
        VDSCS  CT
Subjt:  VDSCSQTCT

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.4.5e-0728.44Show/hide
Query:  SIVILCLVLSLVAGKSTAYV--GECYVGCFSPC-----LSSVVDCA-VCIGKCIITVESSPMQLKHMD-NRYFCKLGCSTSLCTKFLTNKHPDEKKVKGC
        +++I+ ++ +L+A  +   +   ECY  C   C         + C   C  +C+       +   ++D + YFCKLGC+T  C    + ++P+ ++V  C
Subjt:  SIVILCLVLSLVAGKSTAYV--GECYVGCFSPC-----LSSVVDCA-VCIGKCIITVESSPMQLKHMD-NRYFCKLGCSTSLCTKFLTNKHPDEKKVKGC

Query:  VDSCSQTCT
        VDSCS  CT
Subjt:  VDSCSQTCT

AT1G12672.1 unknown protein9.0e-0842.86Show/hide
Query:  IITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTN
        ++T   S  ++ H  N Y+CKLGCST  C    + ++P+  KV  CVDSCS  C+N
Subjt:  IITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTN

AT1G12672.2 unknown protein1.5e-0742.19Show/hide
Query:  CIGKCIITVES---SPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTN
        CI  C+    S   S  ++ H  N Y+CKLGCST  C    + ++P+  KV  CVDSCS  C+N
Subjt:  CIGKCIITVES---SPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCAATTGTTATACTTTGCTTGGTTCTCAGCTTGGTTGCGGGAAAGTCGACAGCGTACGTAGGCGAATGCTATGTTGGGTGCTTCAGTCCATGCCTGTCTAGTGT
CGTCGACTGTGCAGTTTGCATTGGAAAATGTATAATAACTGTGGAGTCCTCTCCAATGCAGTTGAAGCACATGGACAATCGTTACTTCTGCAAGCTTGGCTGTTCCACTT
CTCTCTGCACCAAGTTCCTCACTAATAAACACCCAGATGAGAAGAAGGTGAAAGGCTGTGTGGACTCATGCTCTCAAACATGCACAAACACTATGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCAATTGTTATACTTTGCTTGGTTCTCAGCTTGGTTGCGGGAAAGTCGACAGCGTACGTAGGCGAATGCTATGTTGGGTGCTTCAGTCCATGCCTGTCTAGTGT
CGTCGACTGTGCAGTTTGCATTGGAAAATGTATAATAACTGTGGAGTCCTCTCCAATGCAGTTGAAGCACATGGACAATCGTTACTTCTGCAAGCTTGGCTGTTCCACTT
CTCTCTGCACCAAGTTCCTCACTAATAAACACCCAGATGAGAAGAAGGTGAAAGGCTGTGTGGACTCATGCTCTCAAACATGCACAAACACTATGGATTAA
Protein sequenceShow/hide protein sequence
MKSIVILCLVLSLVAGKSTAYVGECYVGCFSPCLSSVVDCAVCIGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTNTMD