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Lag0002971 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002971
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionthionin-like protein 2
Genome locationchr4:47118088..47118517
RNA-Seq ExpressionLag0002971
SyntenyLag0002971
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575553.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.5e-3061.26Show/hide
Query:  MKSIVVLFLVLSLVV---GKSTAYPG--ECYVGCFGTCLSSVFDCALCLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD
        MK+++V  LVLS VV    + T Y G   CY GC  +C  S F CA+C+GKC+I+VES+PMQ  HMDNRYFCKLGCSTS C K L N HP+EK++KGCV+
Subjt:  MKSIVVLFLVLSLVV---GKSTAYPG--ECYVGCFGTCLSSVFDCALCLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD

Query:  SCSQTCTNTMN
        SCS TCTN MN
Subjt:  SCSQTCTNTMN

KAG6575558.1 hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2862.77Show/hide
Query:  VGKSTAYPG--ECYVGCFGTCLSSVFDCALCLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTNTMN
        + + T Y G   CY GC  +C  S F CA+C+GKC+I+VES+PMQ  HMDNRYFCKLGCSTS C K L N HP+EK++KGCV+SCS TCTN MN
Subjt:  VGKSTAYPG--ECYVGCFGTCLSSVFDCALCLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTNTMN

KAG7014099.1 hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3062.16Show/hide
Query:  MKSIVVLFLVLSLVV---GKSTAYPG--ECYVGCFGTCLSSVFDCALCLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD
        MK+++V  LVLS VV    + T Y G   CY GC  +CL S F CA+C+GKC+I+VES+PMQ  HMDNRYFCKLGCSTS C K L N HP+EK++KGCV+
Subjt:  MKSIVVLFLVLSLVV---GKSTAYPG--ECYVGCFGTCLSSVFDCALCLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD

Query:  SCSQTCTNTMN
        SCS TCTN MN
Subjt:  SCSQTCTNTMN

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]3.9e-2152.38Show/hide
Query:  MKSIVVLFLVLSLVVGKSTAYPGECYVGCFGTC-LSSVFDCALCLGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS
        MKS+VV+  +LSLV G+STA  G+CY  CF  C ++       C GKC+   + + S+P  L H+D  YFCKLGC+TSLCTKF T   P EKKV+ CV+S
Subjt:  MKSIVVLFLVLSLVVGKSTAYPGECYVGCFGTC-LSSVFDCALCLGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS

Query:  CSQTC
        CS+TC
Subjt:  CSQTC

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]2.7e-2252.83Show/hide
Query:  MKSIVVLFLVLSLVVGKSTAYPGECYVGCFGTCLSS----VFDC-ALCLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD
        MKS++++  ++SLVVG+STA  G+CY  CF  C  +    +  C A CLG C+  + SSP+   H+D  YFCKLGC+TSLCTKF T K P EKKV+ CV+
Subjt:  MKSIVVLFLVLSLVVGKSTAYPGECYVGCFGTCLSS----VFDC-ALCLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD

Query:  SCSQTC
        SC QTC
Subjt:  SCSQTC

TrEMBL top hitse value%identityAlignment
A0A1S3CDB8 beta-hordothionin-like4.0e-1949.61Show/hide
Query:  MKSIVVLFLVLS-LVVGKSTAY----------------PGECYVGC-FGTCLSSVFDCALCLGKC-IITVESS-PMQLKHMDNRYFCKLGCSTSLCTKFL
        MKSI VL L+LS LVVGKS                      CY+ C    C   VF CA+CLGKC ++  ESS   +   MDN  FCK+GC+TSLCTKF 
Subjt:  MKSIVVLFLVLS-LVVGKSTAY----------------PGECYVGC-FGTCLSSVFDCALCLGKC-IITVESS-PMQLKHMDNRYFCKLGCSTSLCTKFL

Query:  --TNKHPDEKKVKGCVDSCSQTCTNTM
           N+H DEK+VKGCV SCSQ CT++M
Subjt:  --TNKHPDEKKVKGCVDSCSQTCTNTM

A0A6J1BFU4 thionin-like protein 29.8e-1849.04Show/hide
Query:  SIVVLFLVLSLVVGKSTAYPGECYVGCFGTCL----SSVFDCAL-CLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSC
        S+++++LVL L+VG+STA    CY+GCF  C+    ++VF C++ CL  CII   S P      D +YFCKLGC+TSLCT   + ++P E+KV  CVDSC
Subjt:  SIVVLFLVLSLVVGKSTAYPGECYVGCFGTCL----SSVFDCAL-CLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSC

Query:  SQTC
        S+TC
Subjt:  SQTC

A0A6J1DDL8 thionin-like protein 25.2e-1952.83Show/hide
Query:  IVVLFLVLSLVVGKSTAYPGECYVGCFGTCLSS----VFDCAL-CLGKCIITVESSPMQLK-HMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSC
        ++++ LVLSLV GKSTA  G+CY  CF  C  +    V  CA  CL  C+    S+       +D RYFCKLGC+TSLCTKF T K P EKKV  CVDSC
Subjt:  IVVLFLVLSLVVGKSTAYPGECYVGCFGTCLSS----VFDCAL-CLGKCIITVESSPMQLK-HMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSC

Query:  SQTCTN
        SQ C N
Subjt:  SQTCTN

A0A6J1KDK0 thionin-like protein 21.9e-2152.38Show/hide
Query:  MKSIVVLFLVLSLVVGKSTAYPGECYVGCFGTC-LSSVFDCALCLGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS
        MKS+VV+  +LSLV G+STA  G+CY  CF  C ++       C GKC+   + + S+P  L H+D  YFCKLGC+TSLCTKF T   P EKKV+ CV+S
Subjt:  MKSIVVLFLVLSLVVGKSTAYPGECYVGCFGTC-LSSVFDCALCLGKCI---ITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDS

Query:  CSQTC
        CS+TC
Subjt:  CSQTC

A0A6P5X8X4 thionin-like protein 27.5e-1850Show/hide
Query:  MKSIVVLFLVLSLVVGKSTAYPGECYVGCFGTCL----SSVFDCAL-CLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD
        M S++++ LVL L++G+STA    CY GCF  C+    +S F CAL CL KC++  ++SP+     D +YFCKLGCSTSLCT   + + P E KV+ CVD
Subjt:  MKSIVVLFLVLSLVVGKSTAYPGECYVGCFGTCL----SSVFDCAL-CLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVD

Query:  SCSQTC
        SCS+TC
Subjt:  SCSQTC

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 23.7e-0628.7Show/hide
Query:  VVLFLVLSLVVGKSTAYP---GECYVGCFGTC-----LSSVFDCAL-CLGKCIITVESSPMQLKHMD-NRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCV
        V++ +V+  ++ ++ A      ECY  C   C           C   C  +C+       +   ++D + YFCKLGC+T  C    + ++P+ ++V  CV
Subjt:  VVLFLVLSLVVGKSTAYP---GECYVGCFGTC-----LSSVFDCAL-CLGKCIITVESSPMQLKHMD-NRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCV

Query:  DSCSQTCT
        DSCS  CT
Subjt:  DSCSQTCT

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.2.6e-0728.7Show/hide
Query:  VVLFLVLSLVVGKSTAYP---GECYVGCFGTC-----LSSVFDCAL-CLGKCIITVESSPMQLKHMD-NRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCV
        V++ +V+  ++ ++ A      ECY  C   C           C   C  +C+       +   ++D + YFCKLGC+T  C    + ++P+ ++V  CV
Subjt:  VVLFLVLSLVVGKSTAYP---GECYVGCFGTC-----LSSVFDCAL-CLGKCIITVESSPMQLKHMD-NRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCV

Query:  DSCSQTCT
        DSCS  CT
Subjt:  DSCSQTCT

AT1G12672.1 unknown protein9.0e-0842.86Show/hide
Query:  IITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTN
        ++T   S  ++ H  N Y+CKLGCST  C    + ++P+  KV  CVDSCS  C+N
Subjt:  IITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTN

AT1G12672.2 unknown protein1.5e-0739.44Show/hide
Query:  SVFDCALCLGKCIITVES---SPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTN
        S F    C+  C+    S   S  ++ H  N Y+CKLGCST  C    + ++P+  KV  CVDSCS  C+N
Subjt:  SVFDCALCLGKCIITVES---SPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCAATTGTTGTACTTTTCTTGGTTCTCAGCTTGGTTGTGGGAAAGTCGACAGCGTACCCAGGCGAATGCTATGTTGGGTGCTTCGGTACATGCCTGTCTAGTGT
CTTCGACTGTGCACTTTGCCTTGGAAAATGTATAATAACTGTCGAGTCCTCCCCAATGCAGTTGAAACACATGGATAATCGTTACTTCTGCAAACTTGGCTGTTCCACTT
CTCTCTGCACCAAGTTCCTCACCAACAAACACCCAGACGAGAAGAAAGTGAAAGGCTGCGTGGACTCTTGCTCTCAAACATGCACAAACACTATGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCAATTGTTGTACTTTTCTTGGTTCTCAGCTTGGTTGTGGGAAAGTCGACAGCGTACCCAGGCGAATGCTATGTTGGGTGCTTCGGTACATGCCTGTCTAGTGT
CTTCGACTGTGCACTTTGCCTTGGAAAATGTATAATAACTGTCGAGTCCTCCCCAATGCAGTTGAAACACATGGATAATCGTTACTTCTGCAAACTTGGCTGTTCCACTT
CTCTCTGCACCAAGTTCCTCACCAACAAACACCCAGACGAGAAGAAAGTGAAAGGCTGCGTGGACTCTTGCTCTCAAACATGCACAAACACTATGAATTAA
Protein sequenceShow/hide protein sequence
MKSIVVLFLVLSLVVGKSTAYPGECYVGCFGTCLSSVFDCALCLGKCIITVESSPMQLKHMDNRYFCKLGCSTSLCTKFLTNKHPDEKKVKGCVDSCSQTCTNTMN