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Lag0002988 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002988
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationchr4:47250026..47254063
RNA-Seq ExpressionLag0002988
SyntenyLag0002988
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
Q9FM79 Pectinesterase QRT15.9e-0469.23Show/hide
Query:  DCLFSFVNCKIMGSGELYLGRAWGRY
        D  FSFVNC I G+G++YLGRAWG Y
Subjt:  DCLFSFVNCKIMGSGELYLGRAWGRY
Q9ZQA3 Probable pectinesterase 155.9e-0482.61Show/hide
Query:  FSFVNCKIMGSGELYLGRAWGRY
        FSFVNCKI GSGE+ LGRAWG Y
Subjt:  FSFVNCKIMGSGELYLGRAWGRY
Arabidopsis top hitse value%identityAlignment
AT2G36710.1 Pectin lyase-like superfamily protein4.2e-0582.61Show/hide
Query:  FSFVNCKIMGSGELYLGRAWGRY
        FSFVNCKI GSGE+ LGRAWG Y
Subjt:  FSFVNCKIMGSGELYLGRAWGRY
AT5G19730.1 Pectin lyase-like superfamily protein4.6e-0465.38Show/hide
Query:  DCLFSFVNCKIMGSGELYLGRAWGRY
        D  FSFV CK+ G+G LYLGRAWG +
Subjt:  DCLFSFVNCKIMGSGELYLGRAWGRY
AT5G55590.1 Pectin lyase-like superfamily protein4.2e-0569.23Show/hide
Query:  DCLFSFVNCKIMGSGELYLGRAWGRY
        D  FSFVNC I G+G++YLGRAWG Y
Subjt:  DCLFSFVNCKIMGSGELYLGRAWGRY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAGGTTCAAATCTCCGAAATGGCCACAACTCCCAAATGAAAAGGCAATGTTTGAAAGGTTTTGCTCCTCTGCTCCAAATCTCACAAGTGGTGTTGTGTTCATTCTTGG
TAAAAGCAAAAGCATTGCCATCACAATCAGAAATGCAAATTATTATGTGCTTGTGCTGGTGCTGGTGCTGGCAGAGTTCCCATGGCCAGTCGACAGAGGCCAACGTATTG
ACACAAGGCCAAGAGTACTCTCGAATCCACGCCACGTTTTCTTCTTCTTCTTTACACCATATCCTCCGTTTCAGCAGATCCCTGTTACCGCCGCGTCTCTCCCGTTCACC
GCTGTCGCCGCCGTCGTCTTTCTTCCACTTGTGCCGCTGCCACCGTCGCATTTCTTCCGTTCTCTGAGGAGGGAAAGCAAAGCCTTTGAAGCAACCCCAGAAATCAAGAT
ACTGGATTGTTTGTTCTCGTTCGTGAACTGTAAGATCATGGGGTCTGGAGAGCTATACTTGGGGCGGGCTTGGGGGCGATACTGGATTGTTGGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TGGAGGTTCAAATCTCCGAAATGGCCACAACTCCCAAATGAAAAGGCAATGTTTGAAAGGTTTTGCTCCTCTGCTCCAAATCTCACAAGTGGTGTTGTGTTCATTCTTGG
TAAAAGCAAAAGCATTGCCATCACAATCAGAAATGCAAATTATTATGTGCTTGTGCTGGTGCTGGTGCTGGCAGAGTTCCCATGGCCAGTCGACAGAGGCCAACGTATTG
ACACAAGGCCAAGAGTACTCTCGAATCCACGCCACGTTTTCTTCTTCTTCTTTACACCATATCCTCCGTTTCAGCAGATCCCTGTTACCGCCGCGTCTCTCCCGTTCACC
GCTGTCGCCGCCGTCGTCTTTCTTCCACTTGTGCCGCTGCCACCGTCGCATTTCTTCCGTTCTCTGAGGAGGGAAAGCAAAGCCTTTGAAGCAACCCCAGAAATCAAGAT
ACTGGATTGTTTGTTCTCGTTCGTGAACTGTAAGATCATGGGGTCTGGAGAGCTATACTTGGGGCGGGCTTGGGGGCGATACTGGATTGTTGGTTCTTAA
Protein sequenceShow/hide protein sequence
WRFKSPKWPQLPNEKAMFERFCSSAPNLTSGVVFILGKSKSIAITIRNANYYVLVLVLVLAEFPWPVDRGQRIDTRPRVLSNPRHVFFFFFTPYPPFQQIPVTAASLPFT
AVAAVVFLPLVPLPPSHFFRSLRRESKAFEATPEIKILDCLFSFVNCKIMGSGELYLGRAWGRYWIVGS