; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002997 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002997
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA helicase
Genome locationchr4:47287608..47289242
RNA-Seq ExpressionLag0002997
SyntenyLag0002997
Gene Ontology termsGO:0006139 - nucleobase-containing compound metabolic process (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0034085 - establishment of sister chromatid cohesion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR006554 - Helicase-like, DEXD box c2 type
IPR010614 - DEAD2
IPR014013 - Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR028331 - ATP-dependent RNA helicase CHL1/DDX11
IPR045028 - Helicase superfamily 1/2, DinG/Rad3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK04029.1 ATP-dependent DNA helicase chl1 [Cucumis melo var. makuwa]2.8e-13185.19Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPT------------GTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNS
        MERI ETEPEFPAFPYKPYSIQLDFM ALYK LNKGGISMLESPT            GTGKTLSIIC ALQW+ADQRKKQNGEIQDGPDK+  N SQFN 
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPT------------GTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNS

Query:  DDEPDWMRKFVVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKV
        DDEPDWMRKFVVSQDHHNQEKK+K KEFG+  GRHKKEGSK+NHQNLF QEEEDHFVT+E+K MQ PNDSLE+DDQEFLVEDYESDDEVALSSGKSKRKV
Subjt:  DDEPDWMRKFVVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKV

Query:  SGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        SGV  SSSSDDEEEQ+ESN +EKLKVYFCSRTHSQLSQFI+ELRKTVFASELNVICLGSRKNFCINEEVLKLG+ASH+NE+CLELQKKKTT+TSKAK
Subjt:  SGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

XP_016902858.1 PREDICTED: ATP-dependent DNA helicase chl1 [Cucumis melo]6.0e-13488.77Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV
        MERI ETEPEFPAFPYKPYSIQLDFM ALYK LNKGGISMLESPTGTGKTLSIIC ALQW+ADQRKKQNGEIQDGPDK+  N SQFN DDEPDWMRKFVV
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV

Query:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE
        SQDHHNQEKK+K KEFG+  GRHKKEGSK+NHQNLF QEEEDHFVT+E+K MQ PNDSLE+DDQEFLVEDYESDDEVALSSGKSKRKVSGV  SSSSDDE
Subjt:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE

Query:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        EEQ+ESN +EKLKVYFCSRTHSQLSQFI+ELRKTVFASELNVICLGSRKNFCINEEVLKLG+ASH+NE+CLELQKKKTT+TSKAK
Subjt:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

XP_022992090.1 ATP-dependent DNA helicase DDX11 isoform X1 [Cucurbita maxima]1.9e-13288.77Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV
        MERI+ETEPEFPAFPYKPYSIQ DFM ALYK LNKGGISMLESPTGTGKTLSIIC ALQWVADQRKKQNG IQDG DK+ TN SQFNSDDEPDWMR F V
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV

Query:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE
        SQDH NQEKK KKKEFGV  GRHKKEGSK NHQNLFSQEEEDHFVTKEQK+MQ P+DSLE++DQEFL+EDYESDDEVALS G+SKRK +GVSISSSSDDE
Subjt:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE

Query:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        E+Q+ESN EEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRK FCINEEVLKLGNASHINERCLELQK+KTTETSKAK
Subjt:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

XP_023548198.1 ATP-dependent DNA helicase DDX11 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-13188.77Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV
        MERI+E EPEFPAFPYKPYSIQ DFM ALYK LNKGGISMLESPTGTGKTLSIIC ALQWVADQRKKQN  IQDG DK+ TN SQFNSDDEPDWMR F V
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV

Query:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE
        SQDH NQEKK KKKEFGV  GRHKKEGSK NHQNLFSQEEEDHFVTKEQK+MQ PNDSLE++DQEFLVEDYESDDEVALS G+SKRK +GVSISSSSDDE
Subjt:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE

Query:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        E+Q+ES+ EEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRK FCINEEVLKLGNASHINERCLELQKKKTTETSKAK
Subjt:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

XP_038900273.1 ATP-dependent DNA helicase DDX11 isoform X1 [Benincasa hispida]2.8e-13188.42Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV
        ME+I+E EPEFPAFPYKPYSIQ DFM ALYKSLNKGGISMLESPTGTGKTLSIIC ALQWVADQRKKQN EIQDGPDK+ TN  QFNSDDEPDWMRKFVV
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV

Query:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE
        SQDH+NQEKKSK KEFGV  GRHKKEG KDNHQNLFSQEEEDH V +E+K MQ PND LE+DDQEFLVED  S+DEVALSSGKSKRKV+GVS SSSSDDE
Subjt:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE

Query:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        EEQ+E N EEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRK FCINEEVLKLGNASHINERCLELQKKKTTETSKAK
Subjt:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

TrEMBL top hitse value%identityAlignment
A0A1S4E3Q4 DNA helicase2.9e-13488.77Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV
        MERI ETEPEFPAFPYKPYSIQLDFM ALYK LNKGGISMLESPTGTGKTLSIIC ALQW+ADQRKKQNGEIQDGPDK+  N SQFN DDEPDWMRKFVV
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV

Query:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE
        SQDHHNQEKK+K KEFG+  GRHKKEGSK+NHQNLF QEEEDHFVT+E+K MQ PNDSLE+DDQEFLVEDYESDDEVALSSGKSKRKVSGV  SSSSDDE
Subjt:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE

Query:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        EEQ+ESN +EKLKVYFCSRTHSQLSQFI+ELRKTVFASELNVICLGSRKNFCINEEVLKLG+ASH+NE+CLELQKKKTT+TSKAK
Subjt:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

A0A5A7V0G9 DNA helicase3.9e-13184.85Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPT------------GTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNS
        MERI ETEPEFPAFPYKPYSIQLDFM ALYK LNKGGISMLESPT            GTGKTLSIIC ALQW+ADQRKKQNGEIQDGPDK+  N SQFN 
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPT------------GTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNS

Query:  DDEPDWMRKFVVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKV
        DDEPDWMRKFVVSQDHHNQEKK+K KEFG+  GRHKKEGSK+NHQNLF QEEEDHFVT+E+K MQ PNDSLE+DDQEFLVEDYESDDEVALSSGKSKRKV
Subjt:  DDEPDWMRKFVVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKV

Query:  SGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        SGV  SSSSDDEEEQ+ESN +EKLKVYFCSRTHSQLSQFI+ELRKTVFASELNVICLGSRKNFCINEEVLKLG+ASH+NE+CLELQKKKTT++SKAK
Subjt:  SGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

A0A5D3C0Y6 DNA helicase1.3e-13185.19Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPT------------GTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNS
        MERI ETEPEFPAFPYKPYSIQLDFM ALYK LNKGGISMLESPT            GTGKTLSIIC ALQW+ADQRKKQNGEIQDGPDK+  N SQFN 
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPT------------GTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNS

Query:  DDEPDWMRKFVVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKV
        DDEPDWMRKFVVSQDHHNQEKK+K KEFG+  GRHKKEGSK+NHQNLF QEEEDHFVT+E+K MQ PNDSLE+DDQEFLVEDYESDDEVALSSGKSKRKV
Subjt:  DDEPDWMRKFVVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKV

Query:  SGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        SGV  SSSSDDEEEQ+ESN +EKLKVYFCSRTHSQLSQFI+ELRKTVFASELNVICLGSRKNFCINEEVLKLG+ASH+NE+CLELQKKKTT+TSKAK
Subjt:  SGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

A0A6J1GSF1 DNA helicase6.7e-13188.77Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV
        MERI+ET+PEFPAFPYKPYSIQ DFM ALYK LNKGGISMLESPTGTGKTLSIIC ALQWVADQRKKQN  IQDG DK+ TN SQFNSDDEPDWMR F V
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV

Query:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE
        SQDH NQEKK KKKEFGV  GRHKKEGSK NHQNLFSQ EEDHFVTKEQK+MQ PNDSLE++DQEFLVEDYESDDEVALS G+SKRK +GVSISSSSDDE
Subjt:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE

Query:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        E+Q+ESN EEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRK FCINEEVLKLGNASHINERCLELQKKKTTETSKAK
Subjt:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

A0A6J1JSL0 DNA helicase9.3e-13388.77Show/hide
Query:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV
        MERI+ETEPEFPAFPYKPYSIQ DFM ALYK LNKGGISMLESPTGTGKTLSIIC ALQWVADQRKKQNG IQDG DK+ TN SQFNSDDEPDWMR F V
Subjt:  MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVV

Query:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE
        SQDH NQEKK KKKEFGV  GRHKKEGSK NHQNLFSQEEEDHFVTKEQK+MQ P+DSLE++DQEFL+EDYESDDEVALS G+SKRK +GVSISSSSDDE
Subjt:  SQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDE

Query:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        E+Q+ESN EEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRK FCINEEVLKLGNASHINERCLELQK+KTTETSKAK
Subjt:  EEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

SwissProt top hitse value%identityAlignment
A1D8E4 ATP-dependent DNA helicase chl11.1e-3434.12Show/hide
Query:  TEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVVSQDHHN
        ++P+    PY PY IQL FM ALY  L +G +++ ESPTGTGK+LS+IC ++ W+ + ++K    +QD  +K+  +    + D EP+WM +F   +    
Subjt:  TEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVVSQDHHN

Query:  QEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISS---------SS
          +K +  E      + K E  K  H +      E     K Q+   +  D  +  D +F+++DY+SD E  ++  K    +SG+S S+           
Subjt:  QEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISS---------SS

Query:  DDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNV------------------ICLGSRKNFCINEEVLKLGNASHINERCLELQK
            E +  +E++ +K+++CSRTHSQLSQF  ELR+    S +                    + LGSRKN CIN +V+ LGNA+ INERCLELQ+
Subjt:  DDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNV------------------ICLGSRKNFCINEEVLKLGNASHINERCLELQK

A8MPP1 Putative ATP-dependent RNA helicase DDX11-like protein 83.6e-3333.97Show/hide
Query:  FPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVAD--QRKKQ---------NGEIQDGPDKS--------GTNGSQFNSDDE
        FP FP+ PYSIQ DFM  LY+ L  G I + ESPTGTGK+LS+IC AL W+ D  Q+K++          G + D  D+S        G  G+      E
Subjt:  FPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVAD--QRKKQ---------NGEIQDGPDKS--------GTNGSQFNSDDE

Query:  PDWMRKFVVSQDHHN-------QEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPN------DSLELDDQEFLVEDYESDDEVA
        P W+ +FV  ++  +       ++ + K++E  +   +H+ +  K   + L  +EEE   + +  + M          + LE  ++E ++ +YESD+E  
Subjt:  PDWMRKFVVSQDHHN-------QEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPN------DSLELDDQEFLVEDYESDDEVA

Query:  LSSGKSKRKVSGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQ----
        ++SG                 +E++D+  EE   K+Y CSRTHSQL+QF+ E++K+ F  ++ ++ LGSR+N C+NE+V  LG+   IN+RC+++Q    
Subjt:  LSSGKSKRKVSGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQ----

Query:  -KKKTTETSKAK
         KKK  E  K K
Subjt:  -KKKTTETSKAK

F1R345 ATP-dependent DNA helicase DDX119.2e-3735.05Show/hide
Query:  IEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVAD---QRKKQNGEIQDGPDKSGT--NGSQFNSDDEPDWMRKF
        +E     FP FP++PY IQ  FM ALY +L++  + + ESPTGTGK+LS+IC AL W+ D   QRK++   + +G   S      +  +   EPDW+ +F
Subjt:  IEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVAD---QRKKQNGEIQDGPDKSGT--NGSQFNSDDEPDWMRKF

Query:  VVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLE-----LDDQEFLVEDYESDDEVALSSGKSKRKVSGVSI
        V  +   +   K K +E        + E  + N Q  ++ + +     +  K +Q   +  E      +++  +V +YESDDE    S            
Subjt:  VVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLE-----LDDQEFLVEDYESDDEVALSSGKSKRKVSGVSI

Query:  SSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKA
            DD ++ D+  EE   K+Y+CSRTHSQL+QF+ E++K+ +   + ++ LGSR+N CIN EV++LGN   +NERCLE+QK K  +  KA
Subjt:  SSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKA

Q6AXC6 ATP-dependent DNA helicase DDX112.6e-3133.44Show/hide
Query:  FPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVAD-QRKKQNGEI-----QDGPDKSGTNGSQFNSD-----------DEPD
        FP FP+ PY IQ DFM  LYK L  G I + ESPTGTGK+LS+IC AL W+ D ++KK   E        GP  S  N    +S             EPD
Subjt:  FPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVAD-QRKKQNGEI-----QDGPDKSGTNGSQFNSD-----------DEPD

Query:  WMRKFVVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQN----------LFSQEEEDHFVTKEQKYMQAPN-----DSLELDDQEFLVEDYESDDEVA
        W+ +FV  ++  +  ++ ++++   V  R ++E  K+  Q+             +EE +  +   ++ + A       + LE  ++  ++ +YESD+E  
Subjt:  WMRKFVVSQDHHNQEKKSKKKEFGVVFGRHKKEGSKDNHQN----------LFSQEEEDHFVTKEQKYMQAPN-----DSLELDDQEFLVEDYESDDEVA

Query:  LSSGKSKRKVSGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKK
               R+ S V        +E +D+  EE   K+Y+CSRTHSQL+QF++E+ K+ F  E  ++ LGSR+  C+NE+V  LG+   +N+RC+++Q+ K
Subjt:  LSSGKSKRKVSGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKK

Q96FC9 ATP-dependent DNA helicase DDX111.4e-3234.29Show/hide
Query:  FPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVAD--QRKKQ---------NGEIQDGPDKS--------GTNGSQFNSDDE
        FP FP+ PYSIQ DFM  LY+ L  G I + ESPTGTGK+LS+IC AL W+ D  Q+K++          G + D  D+S        G  G+      E
Subjt:  FPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVAD--QRKKQ---------NGEIQDGPDKS--------GTNGSQFNSDDE

Query:  PDWMRKFVVSQDHHN-------QEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPN------DSLELDDQEFLVEDYESDDEVA
        P W+ +FV  ++  +       ++ + K++E  +   +H+ +  K   + L  +EEE   + +  + M          + LE  ++E ++ +YESD+E  
Subjt:  PDWMRKFVVSQDHHN-------QEKKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPN------DSLELDDQEFLVEDYESDDEVA

Query:  LSSGKSKRKVSGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQ----
               +KV       +S  +E++D+  EE   K+Y+CSRTHSQL+QF+ E++K+ F  ++ ++ LGSR+N C+NE+V  LG+   IN+RC+++Q    
Subjt:  LSSGKSKRKVSGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQ----

Query:  -KKKTTETSKAK
         KKK  E  K K
Subjt:  -KKKTTETSKAK

Arabidopsis top hitse value%identityAlignment
AT1G20720.1 RAD3-like DNA-binding helicase protein3.0e-0624.26Show/hide
Query:  FPYKPYSIQLDFMTALYKSLNKGG-----ISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVVSQDHHNQE
        FPY+PY  QL FM+ +  +L++        ++LESPTGTGK+LS++CS L W                                              Q 
Subjt:  FPYKPYSIQLDFMTALYKSLNKGG-----ISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVVSQDHHNQE

Query:  KKSKKKEFGVVFGRHKKEGSKD--NHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDEEEQDES
         KS+  +  +   +   E + D  NH   F  E +             P+D+                                    +S++ E+ +  +
Subjt:  KKSKKKEFGVVFGRHKKEGSKD--NHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDEEEQDES

Query:  NEEEKL-KVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKK
         +  K+  +Y+ SRTHSQ++Q I+E RKT +   + V  L SRK++C N  VL   N   +++ C  L K K
Subjt:  NEEEKL-KVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKK

AT1G20750.1 RAD3-like DNA-binding helicase protein3.5e-0724.16Show/hide
Query:  FPYKPYSIQLDFMTALYKSLNKG-----GISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVVSQDHHNQE
        FPY+PY  QL FM+ +  +L++        ++LESPTGTGK+LS++CS L W                                                
Subjt:  FPYKPYSIQLDFMTALYKSLNKG-----GISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVVSQDHHNQE

Query:  KKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDEEEQDESNE
        +KS K  F                                      PN +L                        SK + S ++ SS+ +  E Q  +  
Subjt:  KKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDEEEQDESNE

Query:  EEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKK
             +Y+ SRTH+Q++Q I+E RKT +   + V  LGSRK +C N  V       +++E+C  L K K
Subjt:  EEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKK

AT1G79890.1 RAD3-like DNA-binding helicase protein9.4e-6952.69Show/hide
Query:  EFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVVSQ-DHHNQE
        EFPAFPYKPYSIQ+DFM ALY+ L+KGG+SMLESPTGTGK+LSIICSALQW+ D+++K+N  + +   K   N    + +DEPDWMR F +++ D  N +
Subjt:  EFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVVSQ-DHHNQE

Query:  KKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDEEEQDESNE
        K  K  +      +H KE        +F++ E+                + EL+DQEFL+++YES DE +   G SKRK +    SSSS+DEE++++ ++
Subjt:  KKSKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDEEEQDESNE

Query:  EEK--LKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK
        +E+   KV+FCSRTHSQLSQF+KELRKTVFA +L V+CLGSRKN CINE+VLKLGN + INERCL+LQKKK ++ SK K
Subjt:  EEK--LKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAK

AT1G79950.1 RAD3-like DNA-binding helicase protein1.1e-0531.25Show/hide
Query:  ETEPEFP---------AFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEP
        E++P+ P          FP++ Y  Q+ +M  + +SL     ++LESPTGTGKTL ++C+ L W     +K  G      D+   +   ++  DEP
Subjt:  ETEPEFP---------AFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEP

AT1G79950.1 RAD3-like DNA-binding helicase protein4.7e-0432.99Show/hide
Query:  SGKSKRKVSGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKK
        S +  RK S +  S S +   +           + + SRTHSQL Q IKEL+++ +  ++  + LGSR+  C+NEEV  L     +   C  L KK+
Subjt:  SGKSKRKVSGVSISSSSDDEEEQDESNEEEKLKVYFCSRTHSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAATAGAAGAAACGGAGCCCGAATTTCCGGCATTTCCATACAAGCCCTACTCGATTCAGCTCGATTTCATGACGGCACTGTATAAATCTCTTAACAAAGGCGG
AATCTCCATGCTTGAAAGCCCAACTGGTACGGGAAAAACTCTCAGCATCATATGTAGTGCTTTGCAATGGGTGGCTGACCAAAGGAAGAAACAGAATGGTGAGATACAAG
ATGGGCCCGACAAGTCTGGCACAAATGGAAGCCAGTTTAATTCAGACGATGAGCCTGATTGGATGAGGAAGTTCGTTGTAAGTCAAGACCACCACAATCAGGAGAAAAAG
AGTAAGAAAAAGGAATTTGGGGTGGTATTTGGAAGACACAAAAAAGAAGGTTCCAAGGATAACCATCAGAATTTGTTTTCACAAGAGGAGGAAGACCATTTTGTTACAAA
GGAACAAAAGTACATGCAGGCTCCAAATGATAGTCTGGAGTTGGATGATCAAGAGTTTTTGGTGGAGGATTATGAAAGTGACGATGAAGTGGCTCTTAGTAGTGGGAAGT
CAAAGAGGAAGGTCAGTGGGGTTTCAATCAGTTCATCTAGCGACGACGAAGAGGAACAGGACGAATCTAATGAAGAGGAGAAGTTGAAAGTTTACTTTTGTAGTCGAACA
CACTCACAGCTTTCACAATTTATAAAGGAGTTAAGGAAGACTGTCTTTGCAAGTGAGTTGAATGTCATTTGCCTAGGTTCTAGGAAGAATTTTTGTATTAATGAAGAGGT
GCTCAAACTTGGTAATGCAAGTCATATAAACGAGCGATGCTTGGAGCTTCAAAAGAAAAAGACTACTGAGACATCCAAAGCCAAGGTATGCGATATTCTTGTGTCAGCGG
TAGATTGGAAGTTGTTTTCCTATAACCAATCTGATAGAATGTTTTCAACTACTGCAAACTTACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAATAGAAGAAACGGAGCCCGAATTTCCGGCATTTCCATACAAGCCCTACTCGATTCAGCTCGATTTCATGACGGCACTGTATAAATCTCTTAACAAAGGCGG
AATCTCCATGCTTGAAAGCCCAACTGGTACGGGAAAAACTCTCAGCATCATATGTAGTGCTTTGCAATGGGTGGCTGACCAAAGGAAGAAACAGAATGGTGAGATACAAG
ATGGGCCCGACAAGTCTGGCACAAATGGAAGCCAGTTTAATTCAGACGATGAGCCTGATTGGATGAGGAAGTTCGTTGTAAGTCAAGACCACCACAATCAGGAGAAAAAG
AGTAAGAAAAAGGAATTTGGGGTGGTATTTGGAAGACACAAAAAAGAAGGTTCCAAGGATAACCATCAGAATTTGTTTTCACAAGAGGAGGAAGACCATTTTGTTACAAA
GGAACAAAAGTACATGCAGGCTCCAAATGATAGTCTGGAGTTGGATGATCAAGAGTTTTTGGTGGAGGATTATGAAAGTGACGATGAAGTGGCTCTTAGTAGTGGGAAGT
CAAAGAGGAAGGTCAGTGGGGTTTCAATCAGTTCATCTAGCGACGACGAAGAGGAACAGGACGAATCTAATGAAGAGGAGAAGTTGAAAGTTTACTTTTGTAGTCGAACA
CACTCACAGCTTTCACAATTTATAAAGGAGTTAAGGAAGACTGTCTTTGCAAGTGAGTTGAATGTCATTTGCCTAGGTTCTAGGAAGAATTTTTGTATTAATGAAGAGGT
GCTCAAACTTGGTAATGCAAGTCATATAAACGAGCGATGCTTGGAGCTTCAAAAGAAAAAGACTACTGAGACATCCAAAGCCAAGGTATGCGATATTCTTGTGTCAGCGG
TAGATTGGAAGTTGTTTTCCTATAACCAATCTGATAGAATGTTTTCAACTACTGCAAACTTACCATAG
Protein sequenceShow/hide protein sequence
MERIEETEPEFPAFPYKPYSIQLDFMTALYKSLNKGGISMLESPTGTGKTLSIICSALQWVADQRKKQNGEIQDGPDKSGTNGSQFNSDDEPDWMRKFVVSQDHHNQEKK
SKKKEFGVVFGRHKKEGSKDNHQNLFSQEEEDHFVTKEQKYMQAPNDSLELDDQEFLVEDYESDDEVALSSGKSKRKVSGVSISSSSDDEEEQDESNEEEKLKVYFCSRT
HSQLSQFIKELRKTVFASELNVICLGSRKNFCINEEVLKLGNASHINERCLELQKKKTTETSKAKVCDILVSAVDWKLFSYNQSDRMFSTTANLP