; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0003008 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003008
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein CURVATURE THYLAKOID 1C, chloroplastic
Genome locationchr4:47357181..47361782
RNA-Seq ExpressionLag0003008
SyntenyLag0003008
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR025564 - Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain
IPR033344 - Protein CURVATURE THYLAKOID 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593469.1 Malonate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia]4.1e-4586.21Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQ-KFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKL
        MASI A+LPPPLLAPGKSFT L T Q K TVFPIAKGRSAN +VKAIGDSSE+STS+DIIKSVRNVWDQPEDRLGLFGLGFAAV   WTA+NLVTA+DKL
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQ-KFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKL

Query:  PLLPGVLEFIGILVSW
        PLLPGVLEFIGILVSW
Subjt:  PLLPGVLEFIGILVSW

XP_022144822.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Momordica charantia]4.1e-4586.96Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP
        MASIVASLPPPLLAPGKSFTLLNTSQK TVFPIAK RSA VVVKA GDSS+ S+SL IIKSV+N+WDQPEDRLGLFGLGFAAVAA+WTA+N VTAIDKLP
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP

Query:  LLPGVLEFIGILVSW
        LLPG+LEFIG LVSW
Subjt:  LLPGVLEFIGILVSW

XP_022964632.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita moschata]4.1e-4586.21Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQ-KFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKL
        MASI A+LPPPLLAPGKSFT L T Q K TVFPIAKGRSAN +VKAIGDSSE+STS+DIIKSVRNVWDQPEDRLGLFGLGFAAV   WTA+NLVTA+DKL
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQ-KFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKL

Query:  PLLPGVLEFIGILVSW
        PLLPGVLEFIGILVSW
Subjt:  PLLPGVLEFIGILVSW

XP_023000405.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima]6.3e-4686.09Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP
        MASI A+LPPPLLAPGKSF  L T QK TVFPIAKGRSAN +VKAIGDSSE+STS+DIIKSVRNVWDQPEDRLGLFGLGFAAV   WTA+NLVTA+DKLP
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP

Query:  LLPGVLEFIGILVSW
        LLPGVLEFIGILVSW
Subjt:  LLPGVLEFIGILVSW

XP_038897597.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Benincasa hispida]2.8e-4687.83Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP
        MASIVA+LPPPLLAP KSFTLLNTSQK T FPIA  RS NVVVKA+G SSE+STSLDIIKSVRNVWDQPEDRL LFGLGFAAVA VWTA+NLVTAIDKLP
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP

Query:  LLPGVLEFIGILVSW
        LLPGVLEFIG LVSW
Subjt:  LLPGVLEFIGILVSW

TrEMBL top hitse value%identityAlignment
A0A0A0KC66 CAAD domain-containing protein3.8e-4482.61Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP
        MASIVA+LPPPLLAP KSFT+LN SQK +VF  A GRS NVVVKA+G SSE+STSLDI+KSVRNVWDQPEDRL LFGLGFAAVA  WTA+N+VTAIDKLP
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP

Query:  LLPGVLEFIGILVSW
        LLPGVLEFIG LVSW
Subjt:  LLPGVLEFIGILVSW

A0A5D3BWY3 Protein CURVATURE THYLAKOID 1C1.9e-4382.61Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP
        MASIVA+LPPPLLAP KSFT+LN SQK +V   AKGR  NVVVKA+G SSE+STSLDIIKSVRNVWDQPEDR  LFGLGFAAVA  WTA+NLVTAIDKLP
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP

Query:  LLPGVLEFIGILVSW
        LLPGVLEFIG LVSW
Subjt:  LLPGVLEFIGILVSW

A0A6J1CUT1 protein CURVATURE THYLAKOID 1C, chloroplastic2.0e-4586.96Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP
        MASIVASLPPPLLAPGKSFTLLNTSQK TVFPIAK RSA VVVKA GDSS+ S+SL IIKSV+N+WDQPEDRLGLFGLGFAAVAA+WTA+N VTAIDKLP
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP

Query:  LLPGVLEFIGILVSW
        LLPG+LEFIG LVSW
Subjt:  LLPGVLEFIGILVSW

A0A6J1HLG0 protein CURVATURE THYLAKOID 1C, chloroplastic2.0e-4586.21Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQ-KFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKL
        MASI A+LPPPLLAPGKSFT L T Q K TVFPIAKGRSAN +VKAIGDSSE+STS+DIIKSVRNVWDQPEDRLGLFGLGFAAV   WTA+NLVTA+DKL
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQ-KFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKL

Query:  PLLPGVLEFIGILVSW
        PLLPGVLEFIGILVSW
Subjt:  PLLPGVLEFIGILVSW

A0A6J1KFS9 protein CURVATURE THYLAKOID 1C, chloroplastic3.1e-4686.09Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP
        MASI A+LPPPLLAPGKSF  L T QK TVFPIAKGRSAN +VKAIGDSSE+STS+DIIKSVRNVWDQPEDRLGLFGLGFAAV   WTA+NLVTA+DKLP
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLP

Query:  LLPGVLEFIGILVSW
        LLPGVLEFIGILVSW
Subjt:  LLPGVLEFIGILVSW

SwissProt top hitse value%identityAlignment
O04616 Protein CURVATURE THYLAKOID 1A, chloroplastic9.6e-0537.88Show/hide
Query:  SSEASTSLD---IIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI
        SSE ++S+D   +I  ++  WD  E++  +   G  A+ AVW +S +V AI+ +PLLP V+E +G+
Subjt:  SSEASTSLD---IIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI

Q8LCA1 Protein CURVATURE THYLAKOID 1B, chloroplastic2.9e-0936.05Show/hide
Query:  RSANVVVKAIGDSSEASTS--LDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI-LVSWVSNK
        R+   V +A   ++EA T+   +I+K+ +  W++ +D+  +  L FA V A+W ++ +++AID+LPL+PGVLE +GI    W + K
Subjt:  RSANVVVKAIGDSSEASTS--LDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI-LVSWVSNK

Q9M812 Protein CURVATURE THYLAKOID 1C, chloroplastic5.6e-2144.88Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKG-------------RSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVW
        MASI A+LP PLL   +   L  TS +   F + +G              S +++VKA G+SS++ST LD++ +++NVWD+ EDRLGL GLGFA + A+W
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKG-------------RSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVW

Query:  TASNLVTAIDKLPLLPGVLEFIGILVS
         + NL+TAIDKLP++    E +GIL S
Subjt:  TASNLVTAIDKLPLLPGVLEFIGILVS

Arabidopsis top hitse value%identityAlignment
AT1G52220.1 FUNCTIONS IN: molecular_function unknown4.0e-2244.88Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKG-------------RSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVW
        MASI A+LP PLL   +   L  TS +   F + +G              S +++VKA G+SS++ST LD++ +++NVWD+ EDRLGL GLGFA + A+W
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKG-------------RSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVW

Query:  TASNLVTAIDKLPLLPGVLEFIGILVS
         + NL+TAIDKLP++    E +GIL S
Subjt:  TASNLVTAIDKLPLLPGVLEFIGILVS

AT1G52220.2 FUNCTIONS IN: molecular_function unknown2.9e-2044.09Show/hide
Query:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKG-------------RSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVW
        MASI A+LP PLL   +   L  TS +   F + +G              S +++VKA G+SS++ST LD++ +++N WD+ EDRLGL GLGFA + A+W
Subjt:  MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKG-------------RSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVW

Query:  TASNLVTAIDKLPLLPGVLEFIGILVS
         + NL+TAIDKLP++    E +GIL S
Subjt:  TASNLVTAIDKLPLLPGVLEFIGILVS

AT2G46820.1 photosystem I P subunit2.1e-1036.05Show/hide
Query:  RSANVVVKAIGDSSEASTS--LDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI-LVSWVSNK
        R+   V +A   ++EA T+   +I+K+ +  W++ +D+  +  L FA V A+W ++ +++AID+LPL+PGVLE +GI    W + K
Subjt:  RSANVVVKAIGDSSEASTS--LDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI-LVSWVSNK

AT2G46820.2 photosystem I P subunit2.1e-1036.05Show/hide
Query:  RSANVVVKAIGDSSEASTS--LDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI-LVSWVSNK
        R+   V +A   ++EA T+   +I+K+ +  W++ +D+  +  L FA V A+W ++ +++AID+LPL+PGVLE +GI    W + K
Subjt:  RSANVVVKAIGDSSEASTS--LDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI-LVSWVSNK

AT4G01150.1 unknown protein6.8e-0637.88Show/hide
Query:  SSEASTSLD---IIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI
        SSE ++S+D   +I  ++  WD  E++  +   G  A+ AVW +S +V AI+ +PLLP V+E +G+
Subjt:  SSEASTSLD---IIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGVLEFIGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTGTTGCTTCTCTTCCTCCGCCATTGTTGGCCCCTGGCAAAAGCTTCACCCTTCTGAATACTTCCCAGAAGTTCACTGTTTTTCCCATTGCAAAG
GGACGTTCTGCAAATGTTGTTGTAAAGGCTATTGGAGACAGCTCTGAGGCTTCTACTTCCCTTGATATTATTAAGTCTGTTCGAAATGTTTGGGATCAACCTGAA
GATCGACTGGGACTTTTTGGCCTGGGATTTGCAGCTGTAGCAGCTGTATGGACAGCATCAAATCTTGTTACGGCTATTGACAAGCTACCACTGCTTCCAGGTGTA
TTAGAATTCATAGGAATACTGGTTTCCTGGGTAAGTAACAAGATATGTCAAGAACTTCTCTACTGCCTTGCCATGGTTCTCTCTCCTTGCAAGTTCCATTCCATT
ACTGACCAATGTTTTCGTTTTCCCCTATCAACTCCAGTGGTTCGTGTATCGCTACCTCTTGTTCAAACCAAACAGGGAAGAGCTTTTGCAGATAATCAACAAGTC
AATAGTAGATGTATTGGGACAATCAGTACAGAAAATCACCTCATTCGTCTCTCTCGCGCCGATCACTCTCCTCTGGTTCTCCATCGTTCGTTGTCACGAAAGACT
GATGCTGATTCTCTGATTCACACCAGTTCTTCTTCTCTCACAGTCGCCACTCACGCCAGCGAGCTCCCGGCAGCAACGGAACAATTACGTCTCTCTACAGGTCGC
CTATCTCCGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATTGTTGCTTCTCTTCCTCCGCCATTGTTGGCCCCTGGCAAAAGCTTCACCCTTCTGAATACTTCCCAGAAGTTCACTGTTTTTCCCATTGCAAAG
GGACGTTCTGCAAATGTTGTTGTAAAGGCTATTGGAGACAGCTCTGAGGCTTCTACTTCCCTTGATATTATTAAGTCTGTTCGAAATGTTTGGGATCAACCTGAA
GATCGACTGGGACTTTTTGGCCTGGGATTTGCAGCTGTAGCAGCTGTATGGACAGCATCAAATCTTGTTACGGCTATTGACAAGCTACCACTGCTTCCAGGTGTA
TTAGAATTCATAGGAATACTGGTTTCCTGGGTAAGTAACAAGATATGTCAAGAACTTCTCTACTGCCTTGCCATGGTTCTCTCTCCTTGCAAGTTCCATTCCATT
ACTGACCAATGTTTTCGTTTTCCCCTATCAACTCCAGTGGTTCGTGTATCGCTACCTCTTGTTCAAACCAAACAGGGAAGAGCTTTTGCAGATAATCAACAAGTC
AATAGTAGATGTATTGGGACAATCAGTACAGAAAATCACCTCATTCGTCTCTCTCGCGCCGATCACTCTCCTCTGGTTCTCCATCGTTCGTTGTCACGAAAGACT
GATGCTGATTCTCTGATTCACACCAGTTCTTCTTCTCTCACAGTCGCCACTCACGCCAGCGAGCTCCCGGCAGCAACGGAACAATTACGTCTCTCTACAGGTCGC
CTATCTCCGGCGTGA
Protein sequenceShow/hide protein sequence
MASIVASLPPPLLAPGKSFTLLNTSQKFTVFPIAKGRSANVVVKAIGDSSEASTSLDIIKSVRNVWDQPEDRLGLFGLGFAAVAAVWTASNLVTAIDKLPLLPGV
LEFIGILVSWVSNKICQELLYCLAMVLSPCKFHSITDQCFRFPLSTPVVRVSLPLVQTKQGRAFADNQQVNSRCIGTISTENHLIRLSRADHSPLVLHRSLSRKT
DADSLIHTSSSSLTVATHASELPAATEQLRLSTGRLSPA