; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0003009 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003009
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCytochrome c-type biogenesis protein
Genome locationchr4:47362078..47363951
RNA-Seq ExpressionLag0003009
SyntenyLag0003009
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0032991 - protein-containing complex (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005616 - CcmH/CycL/Ccl2/NrfF family
IPR038297 - CcmH/CycL/Ccl2/NrfF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149299.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus]7.5e-6691.72Show/hide
Query:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY
        +  K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DKDIYKKLENDYGETILYTPKFDLQTA LWLSPVI VAGAA GVWAY
Subjt:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY

Query:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS
        SKHKQ+SNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQR+ SS
Subjt:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS

XP_008452301.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo]1.3e-6591.03Show/hide
Query:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY
        +  K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDK+IYKKLENDYGETILYTPKFDLQTA LWLSPV+ VAGAA GVWAY
Subjt:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY

Query:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS
        SKHKQ+SNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQR+ SS
Subjt:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS

XP_022152937.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charantia]9.1e-6489.44Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DK+IY+KLE+DYGET+LYTPKFDLQTAALWLSPV+ VAGAAAGVWAY+KH
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS
        KQK+NVHIMALNLVRGVPLTPKEKQTMLDLL+PPP QR+ SS
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS

XP_022953979.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata]9.1e-6490.78Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DK+I+KKLENDYGETILYTPKFDLQTAALWLSPV+ VAGAAAGVWAYSK+
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMS
        KQKSNVHIMALN+VRGVPLTP+EKQTMLDLLSPPP QR+ S
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMS

XP_038904619.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida]2.0e-6693.66Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDK+IYKKLENDYGET+LYTPKFDLQTAALWLSPV+ VAGAAAGVWAYSKH
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS
        KQ+SNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQR+ SS
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS

TrEMBL top hitse value%identityAlignment
A0A0A0L351 Cytochrome c-type biogenesis protein3.6e-6691.72Show/hide
Query:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY
        +  K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DKDIYKKLENDYGETILYTPKFDLQTA LWLSPVI VAGAA GVWAY
Subjt:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY

Query:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS
        SKHKQ+SNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQR+ SS
Subjt:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS

A0A1S4DZT6 Cytochrome c-type biogenesis protein6.2e-6691.03Show/hide
Query:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY
        +  K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDK+IYKKLENDYGETILYTPKFDLQTA LWLSPV+ VAGAA GVWAY
Subjt:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY

Query:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS
        SKHKQ+SNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQR+ SS
Subjt:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS

A0A5A7TY95 Cytochrome c-type biogenesis protein6.2e-6691.03Show/hide
Query:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY
        +  K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDK+IYKKLENDYGETILYTPKFDLQTA LWLSPV+ VAGAA GVWAY
Subjt:  SFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAY

Query:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS
        SKHKQ+SNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQR+ SS
Subjt:  SKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSS

A0A6J1GPV4 Cytochrome c-type biogenesis protein4.4e-6490.78Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DK+I+KKLENDYGETILYTPKFDLQTAALWLSPV+ VAGAAAGVWAYSK+
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMS
        KQKSNVHIMALN+VRGVPLTP+EKQTMLDLLSPPP QR+ S
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMS

A0A6J1JTI4 Cytochrome c-type biogenesis protein4.4e-6490.78Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        K  LVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DK+I+KKLENDYGETILYTPKFDLQTAALWLSPV+ VAGAAAGVWAYSK+
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMS
        KQKSNVHIMALN+VRGVPLTP+EKQTMLDLLSPPP QR+ S
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMS

SwissProt top hitse value%identityAlignment
B8AFK5 Cytochrome c-type biogenesis CcmH-like mitochondrial protein8.3e-6082.22Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        +  ++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGK+DK+IYKKL+ DYGETILYTPKFDLQTAA+WLSPVI V G AAGVWAY KH
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPP
        +Q++NVHIMALNLVRGVPLTP+EK+TMLD+L+PPP
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPP

P45405 Cytochrome c-type biogenesis protein CcmH4.8e-1534.65Show/hide
Query:  EARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKHKQKSN
        E RAR++S  +RC+ C +QSI+DS A +A  LR L+R+ I +G ++  +   L   YGE +L  P+F+ QT  LWL   +++ G    +W   + + +S 
Subjt:  EARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKHKQKSN

Query:  VHIMALNLVRGVPLTPKEKQTMLDLLS
          + A       PLTP E+  +  L+S
Subjt:  VHIMALNLVRGVPLTPKEKQTMLDLLS

P45406 Cytochrome c-type biogenesis protein CcmH1.2e-1335.38Show/hide
Query:  VEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSP-VIVVAGAAAGVWAYSKHKQK
        +EARAR IS  +RC+ C +QSI+DS A++A  LR L+R+ +++G +D+ +   + + YGE +L  P+ + +T  LW  P +++VAG    V A  +   +
Subjt:  VEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSP-VIVVAGAAAGVWAYSKHKQK

Query:  SNVHIMALNLVRGVPLTPKEKQTMLDLLSP
                  V G PL+ +EK+ +  LL P
Subjt:  SNVHIMALNLVRGVPLTPKEKQTMLDLLSP

Q6K7S7 Cytochrome c-type biogenesis CcmH-like mitochondrial protein8.3e-6082.22Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        +  ++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGK+DK+IYKKL+ DYGETILYTPKFDLQTAA+WLSPVI V G AAGVWAY KH
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPP
        +Q++NVHIMALNLVRGVPLTP+EK+TMLD+L+PPP
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPP

Q9XI46 Cytochrome c-type biogenesis CcmH-like mitochondrial protein1.2e-5072.39Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        K  +++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GKTDK+IY KLE+++GET+LY PKFDLQTAALWL+PVI+  G AAG+  Y KH
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPP
        + + NV IMALNL+RGVPLTPKE+ T+LD+L PP
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPP

Arabidopsis top hitse value%identityAlignment
AT1G15220.1 cytochrome c biogenesis protein family8.6e-5272.39Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        K  +++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GKTDK+IY KLE+++GET+LY PKFDLQTAALWL+PVI+  G AAG+  Y KH
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPP
        + + NV IMALNL+RGVPLTPKE+ T+LD+L PP
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPP

AT1G15220.2 cytochrome c biogenesis protein family8.6e-5272.39Show/hide
Query:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH
        K  +++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GKTDK+IY KLE+++GET+LY PKFDLQTAALWL+PVI+  G AAG+  Y KH
Subjt:  KNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYTPKFDLQTAALWLSPVIVVAGAAAGVWAYSKH

Query:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPP
        + + NV IMALNL+RGVPLTPKE+ T+LD+L PP
Subjt:  KQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGCCGATGTTTGTTCGTGTGGTTCTGAATTTTGCCGCAATCGAATTGGTTTTAGTTGCTGCATTTGTTGCTCTAATGGTGGAAAAATGGGGCCTAGGGCAATAAC
GGTTTCCTTCAACAAGAATTCTCTGGTGGAAGCCCGCGCAAGAAACATTAGTCACAATGTCAGGTGCATTGAGTGCGGTAGTCAATCCATTGAAGATTCACAAGCAGATA
TTGCGATTCTCCTCAGAAAGTTGATCCGTGATGAGATTCGATCTGGGAAGACCGACAAGGACATCTATAAAAAGCTTGAGAATGATTACGGGGAGACGATCCTTTATACC
CCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACCGGTCATTGTAGTGGCTGGCGCTGCTGCAGGAGTATGGGCTTATAGTAAGCACAAGCAAAAGTCTAATGT
TCACATCATGGCTTTAAATTTGGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAGCAAACCATGTTAGATCTGCTCTCACCTCCACCTTCTCAGAGAAGTATGTCTTCTG
GTGGAGAAGTTGGCGAAGGCAGTGAGACAACTACTCTCTATTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGCCGATGTTTGTTCGTGTGGTTCTGAATTTTGCCGCAATCGAATTGGTTTTAGTTGCTGCATTTGTTGCTCTAATGGTGGAAAAATGGGGCCTAGGGCAATAAC
GGTTTCCTTCAACAAGAATTCTCTGGTGGAAGCCCGCGCAAGAAACATTAGTCACAATGTCAGGTGCATTGAGTGCGGTAGTCAATCCATTGAAGATTCACAAGCAGATA
TTGCGATTCTCCTCAGAAAGTTGATCCGTGATGAGATTCGATCTGGGAAGACCGACAAGGACATCTATAAAAAGCTTGAGAATGATTACGGGGAGACGATCCTTTATACC
CCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACCGGTCATTGTAGTGGCTGGCGCTGCTGCAGGAGTATGGGCTTATAGTAAGCACAAGCAAAAGTCTAATGT
TCACATCATGGCTTTAAATTTGGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAGCAAACCATGTTAGATCTGCTCTCACCTCCACCTTCTCAGAGAAGTATGTCTTCTG
GTGGAGAAGTTGGCGAAGGCAGTGAGACAACTACTCTCTATTGCTAG
Protein sequenceShow/hide protein sequence
MFADVCSCGSEFCRNRIGFSCCICCSNGGKMGPRAITVSFNKNSLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKDIYKKLENDYGETILYT
PKFDLQTAALWLSPVIVVAGAAAGVWAYSKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRSMSSGGEVGEGSETTTLYC