; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0003032 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003032
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNuclear pore complex protein NUP35
Genome locationchr4:47501854..47503937
RNA-Seq ExpressionLag0003032
SyntenyLag0003032
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0051028 - mRNA transport (biological process)
GO:0031965 - nuclear membrane (cellular component)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0044615 - nuclear pore nuclear basket (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005543 - phospholipid binding (molecular function)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR007846 - RNA-recognition motif (RRM) Nup35-type domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR017389 - Nucleoporin, NUP53
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051033.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa]4.0e-15183.64Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        P KNKS ASTSYTPI+GQ SRQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP  KLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK                       LDEKLNNPGFMVIPPVSSRTSELLATRG  RPY+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_004141656.1 nuclear pore complex protein NUP35 [Cucumis sativus]8.1e-15284.24Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        P KNKS ASTSYTPISGQQSRQGSAGF+WWSTSKG  +EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP  KLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK                       L+E+LNNPGFMVIPPVSSRTSELLATRG  RPYNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        G ++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_008462444.1 PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]2.6e-15083.33Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        P KNKS ASTSYTPI+GQ SRQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP  KLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK                       LDEKLNNPGFMVIPPVSSRTSELLATRG   PY+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_022151212.1 nuclear pore complex protein NUP35 [Momordica charantia]1.3e-15485.45Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPESGIPD+PLSPEIKSDPRTPIQSHDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        PMKNKS ASTSYTP SGQQSRQGSAGF+WWSTSKG  +EQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC P GKLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK                       LDEK+NNPGFMVIPPV SRT+ELLATRG  R YNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GNSNARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_038900103.1 nuclear pore complex protein NUP35 [Benincasa hispida]2.0e-15887.27Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+ VHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGI D+P+SPEIKSDPRTPIQSHDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        P+KNKS ASTSYTPISGQQSRQGSAGF+WWSTSKG  +EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP  KLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNK                       LDEKLN+PGFMV PPVSSRTSELLATRGL RPYNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GNS+ARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

TrEMBL top hitse value%identityAlignment
A0A0A0K7B2 Nuclear pore complex protein NUP353.9e-15284.24Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        P KNKS ASTSYTPISGQQSRQGSAGF+WWSTSKG  +EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP  KLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK                       L+E+LNNPGFMVIPPVSSRTSELLATRG  RPYNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        G ++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A1S3CH09 Nuclear pore complex protein NUP351.3e-15083.33Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        P KNKS ASTSYTPI+GQ SRQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP  KLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK                       LDEKLNNPGFMVIPPVSSRTSELLATRG   PY+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A5A7U592 Nuclear pore complex protein NUP352.0e-15183.64Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        P KNKS ASTSYTPI+GQ SRQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP  KLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK                       LDEKLNNPGFMVIPPVSSRTSELLATRG  RPY+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1DCV4 Nuclear pore complex protein NUP356.5e-15585.45Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPESGIPD+PLSPEIKSDPRTPIQSHDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        PMKNKS ASTSYTP SGQQSRQGSAGF+WWSTSKG  +EQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC P GKLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK                       LDEK+NNPGFMVIPPV SRT+ELLATRG  R YNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GNSNARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1JYW9 Nuclear pore complex protein NUP356.9e-14982.78Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRT NSGRQSLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPD+P+SPE+KSDP TPIQSHDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL
        PMK+KS ASTS+TPIS QQSRQ SAGF+WWST KG  +EQEDKGKSSPVEGVIQPGALITL TPREVARPEVQRNCLP GKLN EEWVTVYGFSPADTNL
Subjt:  PMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILY+NRS AHKAL+K                      TLDEKLNNPGFMV+PPVSSRT+EL    G  RPYN QN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGG-TIASPSKSLVSKVMDLMFGV
        GNS ARQSGG TIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGG-TIASPSKSLVSKVMDLMFGV

SwissProt top hitse value%identityAlignment
O04326 Nuclear pore complex protein NUP352.1e-11064.37Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQS--HDF
        M++  HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPESGI D+  SP+ KSD RTP QS   + 
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQS--HDF

Query:  SSPMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPAD
         +P K K  AS S++ ++ QQS+Q S   +WWS SK G STEQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +PTG L+ EEWVTVYGFSP D
Subjt:  SSPMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPAD

Query:  TNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALN---------------------KMTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN
        TNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALN                     K  L+E+LNN GFM +PP SS  +     R L+RP  
Subjt:  TNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALN---------------------KMTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN

Query:  LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV
        LQNG++ + Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV

Q66IJ0 Nucleoporin NUP354.5e-1226.01Show/hide
Query:  MNSTVHRTPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQS
        + S     P++G Q L      D+ +PV        TP Q  ++  +  R    +   PP PV  T +D+SG+   P   I D   SP + S P  P ++
Subjt:  MNSTVHRTPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQS

Query:  HDFS---SPMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLNEEWVTVYGF
          FS   +P+     +S     ISG + R  S+ F+  +      T              + P  +    T  +    + Q        L++ WVTV+GF
Subjt:  HDFS---SPMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLNEEWVTVYGF

Query:  SPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNP--GFMVIPPV--------SSRT
          A  + +L +F + G I+KHV    + NWMHI YQ++  A KAL+K                     M   EK++ P    +  PPV        S  T
Subjt:  SPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNP--GFMVIPPV--------SSRT

Query:  SELLATRGLARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG
            + R LA  Y           +        +S+VSK M+ MFG
Subjt:  SELLATRGLARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG

Q6P6X9 Nucleoporin NUP352.5e-1027.49Show/hide
Query:  TPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPM-K
        +P  G Q L      DL +PVT +   F   G A   S L          P P V T +D+SG              +P ++S       S    SP+  
Subjt:  TPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPM-K

Query:  NKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLNEEWVTVYGFSPADTNLVLRE
         K   +  +TP+SG Q   G+   N++S        Q+ K   SP +  + P       T  +    E Q        L++ W+TV+GF PA  + +L +
Subjt:  NKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLNEEWVTVYGFSPADTNLVLRE

Query:  FEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVS---SRTSELLATRGLARPYN-LQN
        F + G ILKHV      NWMH+ YQ++  A KAL+K                     M   +K +    +  PPV    + +  L   R + RP +    
Subjt:  FEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---------------------MTLDEKLNNPGFMVIPPVS---SRTSELLATRGLARPYN-LQN

Query:  GNSNARQSGGTIASPSK--SLVSKVMDLMFG
         +S+  Q      +P K  S VSK M+ MFG
Subjt:  GNSNARQSGGTIASPSK--SLVSKVMDLMFG

Q8NFH5 Nucleoporin NUP351.9e-1025.71Show/hide
Query:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQ
        DL +PVT +    S  G +  V  +          P P V   +D+SG+   P   I D   SP + S P T           + +   S   +P+ G  
Subjt:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQ

Query:  SRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLNEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRD
        S  G+    +   S G            P +  + P  L    T  +    E          L++ WVTV+GF  A  + +L +F + G ILKHV     
Subjt:  SRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLNEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRD

Query:  ANWMHILYQNRSDAHKALNK---------------------MTLDEK--LNNPGFMVIPPVSS--------RTSELLATRGLARPYNLQNGNSNARQSGG
         NWMHI YQ++  A KAL+K                     M   ++  L++P     PP+ +         T  +   R LA  Y     +        
Subjt:  ANWMHILYQNRSDAHKALNK---------------------MTLDEK--LNNPGFMVIPPVSS--------RTSELLATRGLARPYNLQNGNSNARQSGG

Query:  TIASPSKSLVSKVMDLMFG
        T     +SLVSK M+ MFG
Subjt:  TIASPSKSLVSKVMDLMFG

Q9VWS2 Nucleoporin Nup354.7e-0927.52Show/hide
Query:  KLNEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKMTLDEKLNNPGFMV------------------IPPVSSRTS
        +L++ WVT++GF P   ++VL+ F  CG I+  V  P++ NWM++ Y +R ++ KALN    +EK+     MV                  +P  ++   
Subjt:  KLNEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKMTLDEKLNNPGFMV------------------IPPVSSRTS

Query:  ELLATRGLARPYNLQN----GNSNARQSGGTIASPSKSLVSKVMDLMFG
        +   +    RP++ Q+       N       +   S  L+ K MDL+FG
Subjt:  ELLATRGLARPYNLQN----GNSNARQSGGTIASPSKSLVSKVMDLMFG

Arabidopsis top hitse value%identityAlignment
AT3G16310.1 mitotic phosphoprotein N' end (MPPN) family protein1.5e-11164.37Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQS--HDF
        M++  HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPESGI D+  SP+ KSD RTP QS   + 
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQS--HDF

Query:  SSPMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPAD
         +P K K  AS S++ ++ QQS+Q S   +WWS SK G STEQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +PTG L+ EEWVTVYGFSP D
Subjt:  SSPMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN-EEWVTVYGFSPAD

Query:  TNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALN---------------------KMTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN
        TNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALN                     K  L+E+LNN GFM +PP SS  +     R L+RP  
Subjt:  TNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALN---------------------KMTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN

Query:  LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV
        LQNG++ + Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTATCAAGATTTAGCATCTCCTGTTACCACGAGGAAAGGGAAGTTCTCAACTCCGGGCCA
GGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTTACCTTGGAAGACCGCTCGGGCTCAGATTTCTCTCCTGAAT
CTGGAATTCCTGATTTTCCTCTTTCCCCAGAAATTAAATCAGACCCGAGGACCCCTATCCAAAGTCACGATTTCTCTTCGCCGATGAAAAATAAGTCAATTGCCAGCACT
TCGTACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCGACATCAAAAGGTGTTAGCACTGAGCAAGAAGATAAGGGAAAAAGTTC
ACCAGTTGAAGGTGTGATTCAACCTGGTGCGTTAATCACACTTCCAACCCCGAGGGAAGTTGCAAGACCGGAGGTGCAGAGGAATTGCTTGCCTACAGGAAAACTCAATG
AGGAATGGGTGACTGTCTATGGATTCTCCCCTGCTGATACAAATCTGGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCT
AATTGGATGCACATTCTTTATCAGAACCGATCTGATGCGCACAAGGCTCTCAACAAAATGACACTAGATGAAAAGTTAAATAATCCAGGATTCATGGTTATCCCACCTGT
ATCTTCTCGAACCTCAGAACTCCTTGCAACGAGAGGACTTGCACGTCCCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCAGGAGGTACCATTGCTTCACCAT
CAAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTATCAAGATTTAGCATCTCCTGTTACCACGAGGAAAGGGAAGTTCTCAACTCCGGGCCA
GGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTTACCTTGGAAGACCGCTCGGGCTCAGATTTCTCTCCTGAAT
CTGGAATTCCTGATTTTCCTCTTTCCCCAGAAATTAAATCAGACCCGAGGACCCCTATCCAAAGTCACGATTTCTCTTCGCCGATGAAAAATAAGTCAATTGCCAGCACT
TCGTACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCGACATCAAAAGGTGTTAGCACTGAGCAAGAAGATAAGGGAAAAAGTTC
ACCAGTTGAAGGTGTGATTCAACCTGGTGCGTTAATCACACTTCCAACCCCGAGGGAAGTTGCAAGACCGGAGGTGCAGAGGAATTGCTTGCCTACAGGAAAACTCAATG
AGGAATGGGTGACTGTCTATGGATTCTCCCCTGCTGATACAAATCTGGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCT
AATTGGATGCACATTCTTTATCAGAACCGATCTGATGCGCACAAGGCTCTCAACAAAATGACACTAGATGAAAAGTTAAATAATCCAGGATTCATGGTTATCCCACCTGT
ATCTTCTCGAACCTCAGAACTCCTTGCAACGAGAGGACTTGCACGTCCCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCAGGAGGTACCATTGCTTCACCAT
CAAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAG
Protein sequenceShow/hide protein sequence
MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIAST
SYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLNEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDA
NWMHILYQNRSDAHKALNKMTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFGV