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Lag0003033 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003033
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRRM Nup35-type domain-containing protein
Genome locationchr4:47504151..47507036
RNA-Seq ExpressionLag0003033
SyntenyLag0003033
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575517.1 hypothetical protein SDJN03_26156, partial [Cucurbita argyrosperma subsp. sororia]8.7e-1857.55Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEP--PP------------PPPPGDCLFVPFGRHFRE
        MAK  N  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N +IERG  P  PP            PPPP      PF   + E
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEP--PP------------PPPPGDCLFVPFGRHFRE

Query:  GKSRAE
         + R +
Subjt:  GKSRAE

XP_008462443.1 PREDICTED: uncharacterized protein LOC103500790 [Cucumis melo]3.2e-2087.5Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGG
        MAK  NVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLID+VER KP+  M ERGG
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGG

XP_022992446.1 uncharacterized protein LOC111488747 [Cucurbita maxima]3.5e-1966.67Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGE----------------PPPPPP
        MAK  N  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N +IE GGE                PPPPPP
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGE----------------PPPPPP

XP_023521779.1 uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo]7.9e-1954.76Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEPPPPP----------PPGDCLFVPFGRHFREGKSR
        MAK  N  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N MIERG  P  PP          PP      PF   ++E + R
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEPPPPP----------PPGDCLFVPFGRHFREGKSR

Query:  AENQIPEAPRISI-SPIQIDQFKAEL
              +   ISI SP Q+   K  L
Subjt:  AENQIPEAPRISI-SPIQIDQFKAEL

XP_038898732.1 uncharacterized protein LOC120086256 [Benincasa hispida]2.2e-2182.43Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEPPP--PPPP
        MAK  NVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFK +N M+E  G+  P  PPPP
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEPPP--PPPP

TrEMBL top hitse value%identityAlignment
A0A0A0K9S8 Uncharacterized protein1.8e-1678.12Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGG
        MAK  NVCCSIELEPKTLNQGQLH+AREVAADVVQKLE SEA+LVLID+VER +P+  M   GG
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGG

A0A1S3CH00 uncharacterized protein LOC1035007901.5e-2087.5Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGG
        MAK  NVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLID+VER KP+  M ERGG
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGG

A0A6J1DD75 uncharacterized protein LOC1110199603.6e-1775.36Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEPPPP
        MAKA  +CCSIELEPKTLN GQL++AREVAADVVQKLEP EAS V ID+VERFK +NQ IE  GEP  P
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEPPPP

A0A6J1GPS6 uncharacterized protein LOC1114564249.4e-1863.33Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERG----------------GEPPPPPPPGD
        MAK  N  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N +IERG                  PPPPP  GD
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERG----------------GEPPPPPPPGD

A0A6J1JTK7 uncharacterized protein LOC1114887471.7e-1966.67Show/hide
Query:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGE----------------PPPPPP
        MAK  N  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N +IE GGE                PPPPPP
Subjt:  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGE----------------PPPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGGCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACT
GGAACCTAGTGAAGCCTCTCTTGTATTGATTGATATTGTAGAACGATTTAAACCAATCAACCAGATGATTGAAAGAGGAGGAGAGCCACCACCGCCACCGCCCCCGGGAG
ATTGTCTTTTCGTCCCATTTGGGCGTCACTTTCGGGAGGGAAAATCCCGAGCGGAAAATCAAATTCCAGAGGCTCCTCGCATTTCAATTTCTCCAATCCAAATCGATCAG
TTCAAAGCAGAGCTCGAGCTCTTTCTGAAGTTTGCTTTCTCTGAATTCATATTTGTGGAGTTTGTTCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGGCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACT
GGAACCTAGTGAAGCCTCTCTTGTATTGATTGATATTGTAGAACGATTTAAACCAATCAACCAGATGATTGAAAGAGGAGGAGAGCCACCACCGCCACCGCCCCCGGGAG
ATTGTCTTTTCGTCCCATTTGGGCGTCACTTTCGGGAGGGAAAATCCCGAGCGGAAAATCAAATTCCAGAGGCTCCTCGCATTTCAATTTCTCCAATCCAAATCGATCAG
TTCAAAGCAGAGCTCGAGCTCTTTCTGAAGTTTGCTTTCTCTGAATTCATATTTGTGGAGTTTGTTCCGTAA
Protein sequenceShow/hide protein sequence
MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEPPPPPPPGDCLFVPFGRHFREGKSRAENQIPEAPRISISPIQIDQ
FKAELELFLKFAFSEFIFVEFVP