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Lag0003049 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003049
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr4:47646738..47648668
RNA-Seq ExpressionLag0003049
SyntenyLag0003049
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040870.1 uncharacterized protein E6C27_scaffold345G00200 [Cucumis melo var. makuwa]5.8e-3355.56Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +    +NISYDKAWRGRE ALN +RG+P+ SYA +  F+  LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]3.4e-3355.56Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +    +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ CT DG++
Subjt:  NKFSGTFLTACTFDGSA

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.0e-3356.41Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +    +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]2.6e-3354.7Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +   ++N+SYDKAWRGRE ALN +RG+P+ SY  +  F+  LI  N GTYTA+E D   RFKF+FM++ATSI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]1.5e-3356.41Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +    +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

TrEMBL top hitse value%identityAlignment
A0A1S4E0D5 uncharacterized protein LOC1079912531.3e-3354.7Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +   ++N+SYDKAWRGRE ALN +RG+P+ SY  +  F+  LI  N GTYTA+E D   RFKF+FM++ATSI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

A0A1S4E392 uncharacterized protein LOC1079918247.4e-3456.41Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +    +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

A0A5A7TC03 ZnF_PMZ domain-containing protein2.8e-3355.56Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +    +NISYDKAWRGRE ALN +RG+P+ SYA +  F+  LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

A0A5D3DFW1 Uncharacterized protein1.6e-3355.56Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +    +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ CT DG++
Subjt:  NKFSGTFLTACTFDGSA

A0A5D3E198 MuDRA-like transposase9.6e-3456.41Show/hide
Query:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK
        C P D+I Y +    +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTDEINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTGTGCGGTTCTATGCGGTGGAGGGAAATGCGTAAGCAGTTTGCCAGGTTTCACCTGGACGAGGACTTCGTCCAGGTTCGAGAAATTCGACGACAAGGCTTGAT
TTTGTGGGCTTGGGCCTTGGCGATTGATGAATACTATTGGGCCTTGGCGATTGATGAATACTATTGGGCCTTGGCTAAACACCTTGTTTGGATCCCGTTTTCTTCTCCAT
CTAACAGCAAAAATCGTGGTTTTGTTGGATGCAACTGTACACCTCGGGACATAATAGAGTATGCTAGGAAAACGGACGAGATCAATATCAGTTACGACAAAGCATGGAGG
GGTAGAGAAAAGGCGTTAAATGAGTTGAGAGGATCTCCTGAAGTGTCTTATGCGCAAATTCCGTTGTTTGCTGCCAGGTTGATCGAAAGGAATTCAGGTACGTACACCGC
CCAGGAAGTTGATTCAAATGACAGGTTCAAGTTCTTCTTCATGAGTATTGCAACATCCATAAACGGGTGGAAACACTGTCTCCCAGTTATTTCGGTAGATGGTACATCTT
TGAAGAATAAATTCAGTGGCACCTTTTTGACGGCTTGCACATTTGATGGGTCGGCGGGAGGAGGTCTACACGAAGGCGATGGCTGGAGGTTGGATCAGCGGGAGGTGGGG
GTCGGCGGTCTGTACGAAGAAGGACTGGCGTTTGTGGGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTTGTGCGGTTCTATGCGGTGGAGGGAAATGCGTAAGCAGTTTGCCAGGTTTCACCTGGACGAGGACTTCGTCCAGGTTCGAGAAATTCGACGACAAGGCTTGAT
TTTGTGGGCTTGGGCCTTGGCGATTGATGAATACTATTGGGCCTTGGCGATTGATGAATACTATTGGGCCTTGGCTAAACACCTTGTTTGGATCCCGTTTTCTTCTCCAT
CTAACAGCAAAAATCGTGGTTTTGTTGGATGCAACTGTACACCTCGGGACATAATAGAGTATGCTAGGAAAACGGACGAGATCAATATCAGTTACGACAAAGCATGGAGG
GGTAGAGAAAAGGCGTTAAATGAGTTGAGAGGATCTCCTGAAGTGTCTTATGCGCAAATTCCGTTGTTTGCTGCCAGGTTGATCGAAAGGAATTCAGGTACGTACACCGC
CCAGGAAGTTGATTCAAATGACAGGTTCAAGTTCTTCTTCATGAGTATTGCAACATCCATAAACGGGTGGAAACACTGTCTCCCAGTTATTTCGGTAGATGGTACATCTT
TGAAGAATAAATTCAGTGGCACCTTTTTGACGGCTTGCACATTTGATGGGTCGGCGGGAGGAGGTCTACACGAAGGCGATGGCTGGAGGTTGGATCAGCGGGAGGTGGGG
GTCGGCGGTCTGTACGAAGAAGGACTGGCGTTTGTGGGAAGATGA
Protein sequenceShow/hide protein sequence
MTLCGSMRWREMRKQFARFHLDEDFVQVREIRRQGLILWAWALAIDEYYWALAIDEYYWALAKHLVWIPFSSPSNSKNRGFVGCNCTPRDIIEYARKTDEINISYDKAWR
GREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSAGGGLHEGDGWRLDQREVG
VGGLYEEGLAFVGR