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Lag0003083 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003083
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr4:47909175..47911732
RNA-Seq ExpressionLag0003083
SyntenyLag0003083
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]3.4e-2639.19Show/hide
Query:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH
        A++ + PS+ WR + W +EL  KG RWR+G+G +I ++ DKW+P    FK++S P+     RV  LF+ S  WN+ LL D+F  ++V  I  IP+A +  
Subjt:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH

Query:  PGCFFWHHDKQGRYTVKSGYKLA--LEDVHEASPSSESSIFS-WWKAL
          C  WH+++ G Y+VKSGY+LA   +D     PS+   + S +WK +
Subjt:  PGCFFWHHDKQGRYTVKSGYKLA--LEDVHEASPSSESSIFS-WWKAL

ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]1.7e-2538.51Show/hide
Query:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH
        A++ + PS+ W  + W +EL  KG RWR+G+G +I ++ DKW+P    FK++S P+     RV  LF+ S  WN+ LL D+F  ++V  I  IP+A +  
Subjt:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH

Query:  PGCFFWHHDKQGRYTVKSGYKLAL--EDVHEASPSSESSIFS-WWKAL
          C  WH+++ G Y+VKSGY+LA   +D     PS+   + S +WK +
Subjt:  PGCFFWHHDKQGRYTVKSGYKLAL--EDVHEASPSSESSIFS-WWKAL

XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina]2.2e-2540Show/hide
Query:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH
        AK+ S PS+ WR ILW R++  KG+RWRIGNG+ I I    WIPR  TFKL+  P   T  +V  L   +Q WN +++   F + D  +I  I +     
Subjt:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH

Query:  PGCFFWHHDKQGRYTVKSGYKLALEDVHEASPSSESSIFSWWKAL
             WH+D++G Y+VKSGY+LAL+      P+S +     W+ L
Subjt:  PGCFFWHHDKQGRYTVKSGYKLALEDVHEASPSSESSIFSWWKAL

XP_024038356.1 uncharacterized protein LOC112097383 [Citrus clementina]3.4e-2645.97Show/hide
Query:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH
        A L S PSY WR ILW RE+  KG RWRIG+G  I IF   WIPR  TFK ++LP   +   V  L  G++ WN +++   F ++D  +I  IP++    
Subjt:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH

Query:  PGCFFWHHDKQGRYTVKSGYKLAL
            FWH+DK+G+Y VKSGY++AL
Subjt:  PGCFFWHHDKQGRYTVKSGYKLAL

XP_024043257.1 uncharacterized protein LOC112099952 [Citrus clementina]2.2e-2538.51Show/hide
Query:  IIIAKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAG
        I+ A+L S+PS+ WR +LW R++  +GSRWRIGNG+ + +++  WIP   TF+ +S P    D  V  L    Q W   L+ D F  ED + I+ I +  
Subjt:  IIIAKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAG

Query:  VNHPGCFFWHHDKQGRYTVKSGYKLALEDVHEASPSSESSIFSWWKAL
          H     WH+DK+G+Y+VKSGY++A++      PS   S  S W  +
Subjt:  VNHPGCFFWHHDKQGRYTVKSGYKLALEDVHEASPSSESSIFSWWKAL

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein3.9e-2841.38Show/hide
Query:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH
        AKL S+PS+ WR I+W R++ + G RWRIG GD + I++  WIPR + FK +S P    D  V  L   +Q W  +L+   F  ED ++I+ I +     
Subjt:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH

Query:  PGCFFWHHDKQGRYTVKSGYKLALEDVHEASPSSESSIFSWWKAL
        P    WH+DK+G Y+VKSGY++A+   H A PSS SS    W  +
Subjt:  PGCFFWHHDKQGRYTVKSGYKLALEDVHEASPSSESSIFSWWKAL

A0A251NPF0 Reverse transcriptase domain-containing protein1.6e-2639.19Show/hide
Query:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH
        A++ + PS+ WR + W +EL  KG RWR+G+G +I ++ DKW+P    FK++S P+     RV  LF+ S  WN+ LL D+F  ++V  I  IP+A +  
Subjt:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH

Query:  PGCFFWHHDKQGRYTVKSGYKLA--LEDVHEASPSSESSIFS-WWKAL
          C  WH+++ G Y+VKSGY+LA   +D     PS+   + S +WK +
Subjt:  PGCFFWHHDKQGRYTVKSGYKLA--LEDVHEASPSSESSIFS-WWKAL

A0A803Q027 Uncharacterized protein1.8e-2544.2Show/hide
Query:  PSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNHPGCFFW
        PS TWRGI+W +EL +KG RW++G+G  I    + W+P   TFK L         +V +L   S+ WN  LL  LF+  DV  I +IP+A  +H  C  W
Subjt:  PSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNHPGCFFW

Query:  HHDKQGRYTVKSGYKLALEDVHEASPS-SESSIFSWWK
        HH+  G Y+VKSGY LAL  + E SPS S      WWK
Subjt:  HHDKQGRYTVKSGYKLALEDVHEASPS-SESSIFSWWK

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)1.6e-2639.19Show/hide
Query:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH
        A++ + PS+ WR + W +EL  KG RWR+G+G +I ++ DKW+P    FK++S P+     RV  LF+ S  WN+ LL D+F  ++V  I  IP+A +  
Subjt:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH

Query:  PGCFFWHHDKQGRYTVKSGYKLA--LEDVHEASPSSESSIFS-WWKAL
          C  WH+++ G Y+VKSGY+LA   +D     PS+   + S +WK +
Subjt:  PGCFFWHHDKQGRYTVKSGYKLA--LEDVHEASPSSESSIFS-WWKAL

M5WJW2 Reverse transcriptase domain-containing protein8.1e-2638.51Show/hide
Query:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH
        A++ + PS+ W  + W +EL  KG RWR+G+G +I ++ DKW+P    FK++S P+     RV  LF+ S  WN+ LL D+F  ++V  I  IP+A +  
Subjt:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLTDYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNH

Query:  PGCFFWHHDKQGRYTVKSGYKLAL--EDVHEASPSSESSIFS-WWKAL
          C  WH+++ G Y+VKSGY+LA   +D     PS+   + S +WK +
Subjt:  PGCFFWHHDKQGRYTVKSGYKLAL--EDVHEASPSSESSIFS-WWKAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.7e-1329.45Show/hide
Query:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPR-PLTDY-------RVKSLFSGS-QSWNMNLLTDLFVQEDVQVIN
        A L SRPS+ W+ I  S+E+  +G+R  +GNG+ I I+  KW+  +     L + R P  +Y       +V  L   S + W  +++  LF + + ++I 
Subjt:  AKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPR-PLTDY-------RVKSLFSGS-QSWNMNLLTDLFVQEDVQVIN

Query:  DIPIAGVNHPGCFFWHHDKQGRYTVKSGYKLALEDVHEASPSSESS
        ++   G      + W +   G YTVKSGY +  + +++ S   E S
Subjt:  DIPIAGVNHPGCFFWHHDKQGRYTVKSGYKLALEDVHEASPSSESS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAGAGGAACGATGAAATTTCTATGAACTTGGTTAAAGGAGAATCGTTTGACTTGGTGGCGAAGGAATTGGACGATGCTGATTTGTTCATCAATAAATCAGAAGG
TGGGGTCCTTCACCCTCCGATCTTTATTATTATTATTATCATTGCTAAGTTGGTGAGTCGACCTTCATATACATGGCGTGGAATTCTTTGGAGTAGAGAGCTAACCATGA
AAGGGAGTAGATGGAGAATTGGAAACGGAGATACCATAGATATATTTGAGGATAAATGGATCCCGAGGGAGAAAACTTTCAAGTTGCTCTCATTGCCACGCCCACTGACT
GACTACAGGGTTAAAAGTCTCTTTTCAGGTAGCCAATCTTGGAATATGAATTTACTAACAGATCTTTTTGTTCAAGAAGATGTGCAGGTAATCAATGATATCCCAATTGC
TGGGGTAAATCACCCAGGTTGTTTCTTCTGGCACCATGACAAACAGGGGAGGTACACAGTCAAGAGCGGGTACAAGCTTGCCTTGGAGGACGTCCATGAGGCGTCTCCAT
CCTCCGAATCGTCAATATTTAGTTGGTGGAAGGCCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCAGAGGAACGATGAAATTTCTATGAACTTGGTTAAAGGAGAATCGTTTGACTTGGTGGCGAAGGAATTGGACGATGCTGATTTGTTCATCAATAAATCAGAAGG
TGGGGTCCTTCACCCTCCGATCTTTATTATTATTATTATCATTGCTAAGTTGGTGAGTCGACCTTCATATACATGGCGTGGAATTCTTTGGAGTAGAGAGCTAACCATGA
AAGGGAGTAGATGGAGAATTGGAAACGGAGATACCATAGATATATTTGAGGATAAATGGATCCCGAGGGAGAAAACTTTCAAGTTGCTCTCATTGCCACGCCCACTGACT
GACTACAGGGTTAAAAGTCTCTTTTCAGGTAGCCAATCTTGGAATATGAATTTACTAACAGATCTTTTTGTTCAAGAAGATGTGCAGGTAATCAATGATATCCCAATTGC
TGGGGTAAATCACCCAGGTTGTTTCTTCTGGCACCATGACAAACAGGGGAGGTACACAGTCAAGAGCGGGTACAAGCTTGCCTTGGAGGACGTCCATGAGGCGTCTCCAT
CCTCCGAATCGTCAATATTTAGTTGGTGGAAGGCCTTATGA
Protein sequenceShow/hide protein sequence
MFQRNDEISMNLVKGESFDLVAKELDDADLFINKSEGGVLHPPIFIIIIIIAKLVSRPSYTWRGILWSRELTMKGSRWRIGNGDTIDIFEDKWIPREKTFKLLSLPRPLT
DYRVKSLFSGSQSWNMNLLTDLFVQEDVQVINDIPIAGVNHPGCFFWHHDKQGRYTVKSGYKLALEDVHEASPSSESSIFSWWKAL