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Lag0003085 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003085
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibosomal_L28e domain-containing protein
Genome locationchr4:47920541..47921180
RNA-Seq ExpressionLag0003085
SyntenyLag0003085
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059447.1 hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa]4.6e-2785.54Show/hide
Query:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR
        MSVKKSLSLTKAEEAKR  R+++ARK RRSFDLCFS PELP+ERGKSLKEM+SEKLKTGI+KWAKAVVAYAR VSDRFGS RR
Subjt:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR

KAG6575488.1 hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2685.37Show/hide
Query:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR
        MSVKKS SLTKAEEAKRP R+D+ARK RRSFDLCFSSPELP+E GKSLKEMDSEKLK  IRKWAKAVVAYAR VS+RFGS R
Subjt:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR

KAG6593505.1 hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2987.95Show/hide
Query:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR
        MSVKKSLSLTKAEEAKR  R+D+ARK RRSFDLCFSSP+L +ERGKSLKEMDSEKLK+GIRKWAK+VVAYARQVSDRFGSWRR
Subjt:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR

KGN45542.1 hypothetical protein Csa_016865 [Cucumis sativus]7.8e-2784.34Show/hide
Query:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR
        MSVKKSLSLTKAEEAKR  R+++ARK RRSFDLCFS PE+P+ERGKSLKEM+SEKLKTGI+KWAKAVVAYAR VSDRFGS RR
Subjt:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR

XP_028964144.1 uncharacterized protein LOC114827006 [Malus domestica]1.2e-1459.77Show/hide
Query:  QQGKKTMSVKKSLSLTKAEEAKRPRRYDSARKRRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR
        ++G  T   +K+LSL   E  K      +A KR  FD CFS  E+  E GKSLKEMDSEKLK+GI++WAKAVVAYARQVSDRFGS R
Subjt:  QQGKKTMSVKKSLSLTKAEEAKRPRRYDSARKRRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR

TrEMBL top hitse value%identityAlignment
A0A0A0KB03 Uncharacterized protein3.8e-2784.34Show/hide
Query:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR
        MSVKKSLSLTKAEEAKR  R+++ARK RRSFDLCFS PE+P+ERGKSLKEM+SEKLKTGI+KWAKAVVAYAR VSDRFGS RR
Subjt:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR

A0A2N9HT47 Uncharacterized protein3.7e-1464.2Show/hide
Query:  MSVKKSLSLTKAEEAKRPRRYDSARKRRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR
        MSVKKSLSL  AE  K         KR  +D CFS  E+ +E GKSLKEMDS KLK  I++WAKAVVAYARQVSDRFGS R
Subjt:  MSVKKSLSLTKAEEAKRPRRYDSARKRRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR

A0A498IZM5 Uncharacterized protein5.7e-1559.77Show/hide
Query:  QQGKKTMSVKKSLSLTKAEEAKRPRRYDSARKRRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR
        ++G  T   +K+LSL   E  K      +A KR  FD CFS  E+  E GKSLKEMDSEKLK+GI++WAKAVVAYARQVSDRFGS R
Subjt:  QQGKKTMSVKKSLSLTKAEEAKRPRRYDSARKRRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR

A0A540KWP0 Uncharacterized protein5.7e-1559.77Show/hide
Query:  QQGKKTMSVKKSLSLTKAEEAKRPRRYDSARKRRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR
        ++G  T   +K+LSL   E  K      +A KR  FD CFS  E+  E GKSLKEMDSEKLK+GI++WAKAVVAYARQVSDRFGS R
Subjt:  QQGKKTMSVKKSLSLTKAEEAKRPRRYDSARKRRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWR

A0A5A7UXU0 Uncharacterized protein2.2e-2785.54Show/hide
Query:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR
        MSVKKSLSLTKAEEAKR  R+++ARK RRSFDLCFS PELP+ERGKSLKEM+SEKLKTGI+KWAKAVVAYAR VSDRFGS RR
Subjt:  MSVKKSLSLTKAEEAKRPRRYDSARK-RRSFDLCFSSPELPLERGKSLKEMDSEKLKTGIRKWAKAVVAYARQVSDRFGSWRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGAGTTGAACTTCCAAACTTTCCAAGCTTCCAAAGTTCACCTGGTCGCAGCCAGAAAGATCAGTACCATAATAATGGTAATACTGATTGTGTCTCTACGGCTGT
ACAAAATCCTTGGCTGCTAGACGAGCAGCAAGGAAAAAAGACCATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCCCAGAAGGTATGATT
CTGCCAGAAAGCGCAGATCCTTCGATCTCTGTTTTTCATCCCCAGAACTACCATTAGAACGTGGGAAGTCTTTGAAAGAGATGGATTCAGAGAAGTTGAAGACTGGAATC
AGGAAATGGGCTAAAGCCGTGGTGGCTTATGCCCGCCAGGTAAGCGATCGCTTCGGTAGCTGGCGTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGAGTTGAACTTCCAAACTTTCCAAGCTTCCAAAGTTCACCTGGTCGCAGCCAGAAAGATCAGTACCATAATAATGGTAATACTGATTGTGTCTCTACGGCTGT
ACAAAATCCTTGGCTGCTAGACGAGCAGCAAGGAAAAAAGACCATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCCCAGAAGGTATGATT
CTGCCAGAAAGCGCAGATCCTTCGATCTCTGTTTTTCATCCCCAGAACTACCATTAGAACGTGGGAAGTCTTTGAAAGAGATGGATTCAGAGAAGTTGAAGACTGGAATC
AGGAAATGGGCTAAAGCCGTGGTGGCTTATGCCCGCCAGGTAAGCGATCGCTTCGGTAGCTGGCGTCGCTAA
Protein sequenceShow/hide protein sequence
MVRVELPNFPSFQSSPGRSQKDQYHNNGNTDCVSTAVQNPWLLDEQQGKKTMSVKKSLSLTKAEEAKRPRRYDSARKRRSFDLCFSSPELPLERGKSLKEMDSEKLKTGI
RKWAKAVVAYARQVSDRFGSWRR