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Lag0003130 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003130
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionvacuolar protein sorting-associated protein 2 homolog 1-like
Genome locationchr4:48346816..48347297
RNA-Seq ExpressionLag0003130
SyntenyLag0003130
Gene Ontology termsGO:0007034 - vacuolar transport (biological process)
GO:0005768 - endosome (cellular component)
InterPro domainsIPR005024 - Snf7 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059408.1 vacuolar protein sorting-associated protein 2-like protein 1-like [Cucumis melo var. makuwa]9.0e-54100Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRKM
Subjt:  AEAEDTGIDSDLQARLDNLRKM

KAG6575451.1 Vacuolar protein sorting-associated protein 2-like 1, partial [Cucurbita argyrosperma subsp. sororia]7.6e-5398.36Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMAD LDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRK+
Subjt:  AEAEDTGIDSDLQARLDNLRKM

XP_004141696.1 vacuolar protein sorting-associated protein 2 homolog 1 [Cucumis sativus]7.6e-5398.36Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MG+AMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELV+QVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRKM
Subjt:  AEAEDTGIDSDLQARLDNLRKM

XP_008462317.1 PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1-like [Cucumis melo]9.0e-54100Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRKM
Subjt:  AEAEDTGIDSDLQARLDNLRKM

XP_022954248.1 vacuolar protein sorting-associated protein 2 homolog 1-like [Cucurbita moschata]2.6e-5399.18Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMAD LDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRKM
Subjt:  AEAEDTGIDSDLQARLDNLRKM

TrEMBL top hitse value%identityAlignment
A0A0A0K7U7 Uncharacterized protein3.7e-5398.36Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MG+AMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELV+QVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRKM
Subjt:  AEAEDTGIDSDLQARLDNLRKM

A0A1S3CGM4 vacuolar protein sorting-associated protein 2 homolog 1-like4.4e-54100Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRKM
Subjt:  AEAEDTGIDSDLQARLDNLRKM

A0A5D3C0P3 Vacuolar protein sorting-associated protein 2-like protein 1-like4.4e-54100Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRKM
Subjt:  AEAEDTGIDSDLQARLDNLRKM

A0A6J1GQK3 vacuolar protein sorting-associated protein 2 homolog 1-like1.3e-5399.18Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMAD LDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRKM
Subjt:  AEAEDTGIDSDLQARLDNLRKM

A0A6J1JXE8 vacuolar protein sorting-associated protein 2 homolog 1-like1.3e-5399.18Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMAD LDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRKM
        AEAEDTGIDSDLQARLDNLRKM
Subjt:  AEAEDTGIDSDLQARLDNLRKM

SwissProt top hitse value%identityAlignment
O43633 Charged multivesicular body protein 2a3.5e-2452.85Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPS--ASVSVSTANNRV
        M +AMKGVTKAMG MNRQ+ LP +QKIM EFERQ E M+M  E+M DA+DDA+  +E+EEE+D +V+QVLDE+G+ +  EL N PS   S+SV+    + 
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPS--ASVSVSTANNRV

Query:  AQAEAEDTGIDSDLQARLDNLRK
          A +     D+DL+ RL NLR+
Subjt:  AQAEAEDTGIDSDLQARLDNLRK

Q6DFS6 Charged multivesicular body protein 2a3.5e-2451.24Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        M +AMKGVTKAM  MNRQ+ LP +QKIM EFE+Q+E M+M  E+M DA+DDA+  +++EEE+D +V+QVLDE+G+ +  EL N PS   S+S A  +  +
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRK
          A     D+DL+ RL+NLR+
Subjt:  AEAEDTGIDSDLQARLDNLRK

Q6IP52 Charged multivesicular body protein 2a1.2e-2452.07Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        M +AMKGVTKAM  MNRQ+ LP +QKIM EFE+Q+E M+M  E+M DA+DDA+  +++EEE+D +V+QVLDE+G+ +  EL N PS   S+S A  +  +
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRK
        A A     D+DL+ RL+NLR+
Subjt:  AEAEDTGIDSDLQARLDNLRK

Q7ZW25 Charged multivesicular body protein 2a2.0e-2451.24Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        M +AMKGVTKAM  MNRQ+ LP +QKIM EFERQ+E M+M  E+M DA+DDA+  +++EEE+D +V+QVLDE+G+ ++ EL N P+   S+S A  + A+
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AEAEDTGIDSDLQARLDNLRK
         +      D+DL+ RL+NLR+
Subjt:  AEAEDTGIDSDLQARLDNLRK

Q9SKI2 Vacuolar protein sorting-associated protein 2 homolog 11.6e-4582.54Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLP+LQKIMQEFERQNE+MEM SEVM DA+DDALEGDEEEEET++LV+QVLDEIGIDIN ELVNAPS +V+V  A N+V Q
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AE---AEDT-GIDSDLQARLDNLRKM
        AE   AED+ GIDSDLQARLDNLRKM
Subjt:  AE---AEDT-GIDSDLQARLDNLRKM

Arabidopsis top hitse value%identityAlignment
AT1G03950.1 vacuolar protein sorting-associated protein 2.38.5e-1845.69Show/hide
Query:  MKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQAEAE
        M+G TKAM  M++ M+     K+M+EF++Q+ +M+MT+E+M+D++DDAL+ DE E+ET++L NQVLDEIGIDI S+L +AP   +    A       +  
Subjt:  MKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQAEAE

Query:  DTGIDSDLQARLDNLR
         +GID +L+ RL  LR
Subjt:  DTGIDSDLQARLDNLR

AT2G06530.1 SNF7 family protein1.1e-4682.54Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ
        MGEAMKGVTKAMGQMNRQMNLP+LQKIMQEFERQNE+MEM SEVM DA+DDALEGDEEEEET++LV+QVLDEIGIDIN ELVNAPS +V+V  A N+V Q
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQ

Query:  AE---AEDT-GIDSDLQARLDNLRKM
        AE   AED+ GIDSDLQARLDNLRKM
Subjt:  AE---AEDT-GIDSDLQARLDNLRKM

AT5G22950.1 SNF7 family protein7.0e-0426.89Show/hide
Query:  KAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLD--------EIGIDINSELVNAPSASVSVSTANNRVAQA
        + M  +N  M  P +   MQEF ++  +  +  E + +A+D+AL+ ++ EEE DE V++VL         E+ + +  E +  P+   S S     VA+ 
Subjt:  KAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLD--------EIGIDINSELVNAPSASVSVSTANNRVAQA

Query:  EAEDTGIDSDLQARLDNLR
          ++  ++ +++ARL  +R
Subjt:  EAEDTGIDSDLQARLDNLR

AT5G44560.1 SNF7 family protein9.4e-1738.89Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVST----ANN
        +   MKG TKAM  MN+QM      K++++F++Q+ +++MT E+M++A+D+ L+ DE EEET++L NQVLDEIG+ + S+L +AP   ++  T    A+ 
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVST----ANN

Query:  RVAQAEAEDTGIDSDLQARLDNLRKM
              +E + +D +L+ RL +LR++
Subjt:  RVAQAEAEDTGIDSDLQARLDNLRKM

AT5G44560.2 SNF7 family protein9.4e-1738.89Show/hide
Query:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVST----ANN
        +   MKG TKAM  MN+QM      K++++F++Q+ +++MT E+M++A+D+ L+ DE EEET++L NQVLDEIG+ + S+L +AP   ++  T    A+ 
Subjt:  MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVST----ANN

Query:  RVAQAEAEDTGIDSDLQARLDNLRKM
              +E + +D +L+ RL +LR++
Subjt:  RVAQAEAEDTGIDSDLQARLDNLRKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAGCCATGAAAGGTGTTACTAAGGCAATGGGCCAGATGAATAGGCAGATGAACTTGCCGGCATTACAGAAGATAATGCAAGAGTTTGAGAGGCAGAATGAGAG
GATGGAAATGACATCTGAAGTAATGGCAGACGCTCTCGATGATGCTTTAGAAGGAGATGAAGAAGAGGAGGAGACAGATGAGCTTGTGAATCAGGTGCTTGATGAGATTG
GAATTGATATCAACTCAGAGCTTGTGAATGCACCCTCAGCTTCTGTGTCAGTGTCAACTGCAAATAATAGAGTTGCCCAAGCAGAAGCCGAAGATACCGGAATTGACAGT
GATTTACAGGCTAGGCTTGATAACTTGAGAAAGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAGCCATGAAAGGTGTTACTAAGGCAATGGGCCAGATGAATAGGCAGATGAACTTGCCGGCATTACAGAAGATAATGCAAGAGTTTGAGAGGCAGAATGAGAG
GATGGAAATGACATCTGAAGTAATGGCAGACGCTCTCGATGATGCTTTAGAAGGAGATGAAGAAGAGGAGGAGACAGATGAGCTTGTGAATCAGGTGCTTGATGAGATTG
GAATTGATATCAACTCAGAGCTTGTGAATGCACCCTCAGCTTCTGTGTCAGTGTCAACTGCAAATAATAGAGTTGCCCAAGCAGAAGCCGAAGATACCGGAATTGACAGT
GATTTACAGGCTAGGCTTGATAACTTGAGAAAGATGTAG
Protein sequenceShow/hide protein sequence
MGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVAQAEAEDTGIDS
DLQARLDNLRKM