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Lag0003131 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003131
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr4:48347673..48348170
RNA-Seq ExpressionLag0003131
SyntenyLag0003131
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU28792.1 hypothetical protein TSUD_357780 [Trifolium subterraneum]7.5e-1940.54Show/hide
Query:  IFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQIS----TIAYKENE-NQETNTETECVLCLSPFEDGECIRKLPGCNHV
        +++  GI II S++IA  FF LTM G CN        P  + +   + S  + +     T  YKE +  Q+   +TECV+CL+ F++ E +RKL  C HV
Subjt:  IFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQIS----TIAYKENE-NQETNTETECVLCLSPFEDGECIRKLPGCNHV

Query:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS
        FH SCID WL SHS CPLCRS ++ V      + S A +  +VAI +S
Subjt:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS

KAA0059407.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa]3.9e-5268.86Show/hide
Query:  MSVIFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHVF
        MSV+FICSG+AI+CSL IAL FF+L M+G  NC CRS P    VKNIK+E SN+I+ISTI Y KEN+++ETN  +EC LCLSP EDGECIRKL  CNHVF
Subjt:  MSVIFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHVF

Query:  HASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV
        HASCIDVWL SHSNCPLCR+ ++HVACN GE TS   NS VV INNSLQI LS   SRR +  ENMV
Subjt:  HASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV

KAE8646506.1 hypothetical protein Csa_015876 [Cucumis sativus]3.1e-4967.86Show/hide
Query:  MSVIFICSGIAIICSLIIALTFFHLTMV-GRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHV
        MSV+FICSGIAIICSL IAL FF+LTM+ G  NC CRS P    VKNIK+E SN+++ISTI Y KEN+++ETN  +EC LCLSP+EDGECIR+L  CNHV
Subjt:  MSVIFICSGIAIICSLIIALTFFHLTMV-GRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHV

Query:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV
        FHASCID+WL SHSNCPLCR+P+  VAC  GE TS      VVAI+NSLQIE S   S+REA PENMV
Subjt:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV

KAG7013994.1 E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-5572.46Show/hide
Query:  MSVIFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHVF
        MSV FICSGIAIICSLII+LTFFHLT++G  NC C S  T E V+NIK+E S+++QI T+ Y KENEN+ETNTE+ECVLCLSPFEDGECIR+LP CNHVF
Subjt:  MSVIFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHVF

Query:  HASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV
        HASCIDVWLSSHS CPLCR+PV+HVAC     T+EA   QVV I NSLQIELS  V R +A PENMV
Subjt:  HASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV

XP_009590813.1 RING-H2 finger protein ATL52-like [Nicotiana tomentosiformis]3.7e-1835.1Show/hide
Query:  IAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEP-VKNIKHEASNVIQISTIAYKE-------NENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHA
        + I+   ++ L+ ++L +V  CN    +  + E     + H+  NVI  S+  YK+       N +++ N + EC +CLS FE+GE +++LP CNH FHA
Subjt:  IAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEP-VKNIKHEASNVIQISTIAYKE-------NENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHA

Query:  SCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS
        SCID+WL SH +CP+CRSPV     ++   T + E+S+   +  ++Q  +S
Subjt:  SCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS

TrEMBL top hitse value%identityAlignment
A0A0A0KAX6 RING-type E3 ubiquitin transferase1.5e-4967.86Show/hide
Query:  MSVIFICSGIAIICSLIIALTFFHLTMV-GRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHV
        MSV+FICSGIAIICSL IAL FF+LTM+ G  NC CRS P    VKNIK+E SN+++ISTI Y KEN+++ETN  +EC LCLSP+EDGECIR+L  CNHV
Subjt:  MSVIFICSGIAIICSLIIALTFFHLTMV-GRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHV

Query:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV
        FHASCID+WL SHSNCPLCR+P+  VAC  GE TS      VVAI+NSLQIE S   S+REA PENMV
Subjt:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV

A0A2K3N066 RING-type E3 ubiquitin transferase4.0e-1840.54Show/hide
Query:  IFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQIS----TIAYKENENQETN-TETECVLCLSPFEDGECIRKLPGCNHV
        +++  GI II S++IA   F LTM G C+        P  V +   + S  + +     T  YKE +  E    +TECV+CLS F++ E +RKL  C HV
Subjt:  IFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQIS----TIAYKENENQETN-TETECVLCLSPFEDGECIRKLPGCNHV

Query:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS
        FH SCID WL SHS CPLCRS ++ V      + S A +  +VAI +S
Subjt:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS

A0A2N9J1M7 RING-type E3 ubiquitin transferase6.0e-2245.83Show/hide
Query:  GIAIICSLIIALTFFHLTM-VGRCNCGCRSTPTP-EPVKNIKHEAS--NVIQISTIAYKEN-ENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASC
        GI +I S+IIAL F++L M V R        PT   PVK    ++S  N + ++T  YK+  EN E  +ETECV+CLS FED EC+ +LP C H FH  C
Subjt:  GIAIICSLIIALTFFHLTM-VGRCNCGCRSTPTP-EPVKNIKHEAS--NVIQISTIAYKEN-ENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASC

Query:  IDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSL
        ID+WL SHS+CPLCR+P++ ++   G   S+ EN+Q V +  S+
Subjt:  IDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSL

A0A2Z6MV30 RING-type E3 ubiquitin transferase3.6e-1940.54Show/hide
Query:  IFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQIS----TIAYKENE-NQETNTETECVLCLSPFEDGECIRKLPGCNHV
        +++  GI II S++IA  FF LTM G CN        P  + +   + S  + +     T  YKE +  Q+   +TECV+CL+ F++ E +RKL  C HV
Subjt:  IFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQIS----TIAYKENE-NQETNTETECVLCLSPFEDGECIRKLPGCNHV

Query:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS
        FH SCID WL SHS CPLCRS ++ V      + S A +  +VAI +S
Subjt:  FHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS

A0A5D3BXP3 RING-type E3 ubiquitin transferase1.9e-5268.86Show/hide
Query:  MSVIFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHVF
        MSV+FICSG+AI+CSL IAL FF+L M+G  NC CRS P    VKNIK+E SN+I+ISTI Y KEN+++ETN  +EC LCLSP EDGECIRKL  CNHVF
Subjt:  MSVIFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAY-KENENQETNTETECVLCLSPFEDGECIRKLPGCNHVF

Query:  HASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV
        HASCIDVWL SHSNCPLCR+ ++HVACN GE TS   NS VV INNSLQI LS   SRR +  ENMV
Subjt:  HASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELS-RVSRREAGPENMV

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL441.2e-1439.39Show/hide
Query:  AIICSLIIALTFFHLTMVGRCNCGCRST---PTPEPVKNIKHEASNVIQISTIAYKENEN---QETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCI
        A++C+LI       L  V RC    R T    +P P K +K +A   +  ST    E+ +    E    TEC +CL+ F DGE IR LP C H FH  CI
Subjt:  AIICSLIIALTFFHLTMVGRCNCGCRST---PTPEPVKNIKHEASNVIQISTIAYKENEN---QETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCI

Query:  DVWLSSHSNCPLCRSPVNHVACNKGESTSEAE
        D WL S S+CP CR  +  V C++    S AE
Subjt:  DVWLSSHSNCPLCRSPVNHVACNKGESTSEAE

Q9FLC6 RING-H2 finger protein ATL731.4e-1542.74Show/hide
Query:  AIICSLIIALTFFHLTMVGRC--NCGCRSTPTPEPV-------KNIKHEASNVIQISTIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHA
        A++C+LI AL    +  V RC   C  R TP  +PV       K IK  A  VI +   +Y      +    TEC++CL  F +GE +R LP CNH FH 
Subjt:  AIICSLIIALTFFHLTMVGRC--NCGCRSTPTPEPV-------KNIKHEASNVIQISTIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHA

Query:  SCIDVWLSSHSNCPLCR
         CID WL SHS+CP CR
Subjt:  SCIDVWLSSHSNCPLCR

Q9LF64 RING-H2 finger protein ATL523.4e-1444.94Show/hide
Query:  STIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS
        S   YK          ++C +CLS FE+ E +R LP CNH FH  CID WL SHSNCPLCR+ V  V      + S  +N  VV  N S
Subjt:  STIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS

Q9LUZ9 RING-H2 finger protein ATL632.8e-1651.16Show/hide
Query:  STPTPEPVKNIKHEASNVI-QISTIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPV
        S+P     ++ K   S+VI  I    Y+ENE +E + E ECV+CL  +E G+  RKL  C H FH  CID+WLSSHS CPLCRSPV
Subjt:  STPTPEPVKNIKHEASNVI-QISTIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPV

Q9SRQ8 RING-H2 finger protein ATL512.0e-1441.11Show/hide
Query:  STIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSL
        S   YK  +       ++C +CLS F++ E +R LP CNH FH  CID WL SHSNCPLCR+    +  +      +  N Q+V  NNS+
Subjt:  STIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSL

Arabidopsis top hitse value%identityAlignment
AT2G17450.1 RING-H2 finger A3A8.2e-1639.39Show/hide
Query:  AIICSLIIALTFFHLTMVGRCNCGCRST---PTPEPVKNIKHEASNVIQISTIAYKENEN---QETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCI
        A++C+LI       L  V RC    R T    +P P K +K +A   +  ST    E+ +    E    TEC +CL+ F DGE IR LP C H FH  CI
Subjt:  AIICSLIIALTFFHLTMVGRCNCGCRST---PTPEPVKNIKHEASNVIQISTIAYKENEN---QETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCI

Query:  DVWLSSHSNCPLCRSPVNHVACNKGESTSEAE
        D WL S S+CP CR  +  V C++    S AE
Subjt:  DVWLSSHSNCPLCRSPVNHVACNKGESTSEAE

AT3G03550.1 RING/U-box superfamily protein1.4e-1541.11Show/hide
Query:  STIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSL
        S   YK  +       ++C +CLS F++ E +R LP CNH FH  CID WL SHSNCPLCR+    +  +      +  N Q+V  NNS+
Subjt:  STIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSL

AT5G05280.1 RING/U-box superfamily protein9.7e-1742.74Show/hide
Query:  AIICSLIIALTFFHLTMVGRC--NCGCRSTPTPEPV-------KNIKHEASNVIQISTIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHA
        A++C+LI AL    +  V RC   C  R TP  +PV       K IK  A  VI +   +Y      +    TEC++CL  F +GE +R LP CNH FH 
Subjt:  AIICSLIIALTFFHLTMVGRC--NCGCRSTPTPEPV-------KNIKHEASNVIQISTIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHA

Query:  SCIDVWLSSHSNCPLCR
         CID WL SHS+CP CR
Subjt:  SCIDVWLSSHSNCPLCR

AT5G17600.1 RING/U-box superfamily protein2.4e-1544.94Show/hide
Query:  STIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS
        S   YK          ++C +CLS FE+ E +R LP CNH FH  CID WL SHSNCPLCR+ V  V      + S  +N  VV  N S
Subjt:  STIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNS

AT5G58580.1 TOXICOS EN LEVADURA 632.0e-1751.16Show/hide
Query:  STPTPEPVKNIKHEASNVI-QISTIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPV
        S+P     ++ K   S+VI  I    Y+ENE +E + E ECV+CL  +E G+  RKL  C H FH  CID+WLSSHS CPLCRSPV
Subjt:  STPTPEPVKNIKHEASNVI-QISTIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSSHSNCPLCRSPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTAATCTTCATCTGCTCCGGCATTGCCATTATTTGCTCACTGATTATAGCCCTTACATTCTTCCATCTTACAATGGTAGGACGGTGTAATTGCGGTTGCCGTTC
GACCCCGACGCCTGAGCCTGTCAAGAACATTAAACATGAAGCCTCAAATGTCATACAGATCTCAACTATTGCGTACAAGGAAAATGAGAATCAAGAAACTAATACTGAAA
CTGAGTGTGTTTTGTGTTTGTCACCTTTTGAAGACGGGGAATGCATACGAAAGCTTCCTGGCTGCAACCATGTCTTTCATGCTTCATGTATTGACGTATGGCTCTCTTCA
CATTCGAACTGCCCACTCTGCCGGAGTCCAGTCAACCATGTTGCTTGTAATAAAGGGGAGTCGACATCTGAGGCGGAGAATTCTCAGGTGGTAGCCATTAATAACAGTCT
CCAAATTGAGCTTTCTCGTGTAAGTAGGAGGGAGGCTGGGCCAGAAAACATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTAATCTTCATCTGCTCCGGCATTGCCATTATTTGCTCACTGATTATAGCCCTTACATTCTTCCATCTTACAATGGTAGGACGGTGTAATTGCGGTTGCCGTTC
GACCCCGACGCCTGAGCCTGTCAAGAACATTAAACATGAAGCCTCAAATGTCATACAGATCTCAACTATTGCGTACAAGGAAAATGAGAATCAAGAAACTAATACTGAAA
CTGAGTGTGTTTTGTGTTTGTCACCTTTTGAAGACGGGGAATGCATACGAAAGCTTCCTGGCTGCAACCATGTCTTTCATGCTTCATGTATTGACGTATGGCTCTCTTCA
CATTCGAACTGCCCACTCTGCCGGAGTCCAGTCAACCATGTTGCTTGTAATAAAGGGGAGTCGACATCTGAGGCGGAGAATTCTCAGGTGGTAGCCATTAATAACAGTCT
CCAAATTGAGCTTTCTCGTGTAAGTAGGAGGGAGGCTGGGCCAGAAAACATGGTTTAA
Protein sequenceShow/hide protein sequence
MSVIFICSGIAIICSLIIALTFFHLTMVGRCNCGCRSTPTPEPVKNIKHEASNVIQISTIAYKENENQETNTETECVLCLSPFEDGECIRKLPGCNHVFHASCIDVWLSS
HSNCPLCRSPVNHVACNKGESTSEAENSQVVAINNSLQIELSRVSRREAGPENMV