; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0003196 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003196
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-binding protein with multiple splicing
Genome locationchr4:48876675..48879867
RNA-Seq ExpressionLag0003196
SyntenyLag0003196
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059349.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]2.0e-17295.72Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAA PPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFLYQIAFF----DASYRMIMP
        MRIQYPFLYQI  F    DA+Y +  P
Subjt:  MRIQYPFLYQIAFF----DASYRMIMP

KAE8646484.1 hypothetical protein Csa_016702 [Cucumis sativus]4.5e-17298.09Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAA PPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFLYQIAFF
        MRIQYPF YQI FF
Subjt:  MRIQYPFLYQIAFF

TYK03977.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]1.5e-17596.63Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAA PPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFLYQIAFFDASYRMIMPILM
        MRIQYPFLYQI F+  S R I+PIL+
Subjt:  MRIQYPFLYQIAFFDASYRMIMPILM

XP_022953445.1 RNA-binding protein with multiple splicing 2 isoform X1 [Cucurbita moschata]2.9e-17194.79Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPP PPPQAA A PPPIPHPHPPQILVDNP RHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSN QLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADA+AYDQSKRLRTGGDYAHT YSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVP+PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGL SVQ GFKQMKILRQERHTVCFIEFEDVNTATNVHH+LQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFLYQIAFFDASYRMIMPILM
        MRIQYPFLYQ   FDASYR I+PIL+
Subjt:  MRIQYPFLYQIAFFDASYRMIMPILM

XP_023547595.1 RNA-binding protein with multiple splicing 2-like isoform X1 [Cucurbita pepo subsp. pepo]1.1e-17094.48Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPP PPPQAA A PPPIPHPHPPQILVDNP RHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSN QLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADA+AYDQSKRLRTGGDYAHT YSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVP+PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGL SVQ GFKQMKILRQERHTVCFIEFEDVNTATNVHH+LQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFLYQIAFFDASYRMIMPILM
        MRIQYPFL+Q   FDASYR I+PIL+
Subjt:  MRIQYPFLYQIAFFDASYRMIMPILM

TrEMBL top hitse value%identityAlignment
A0A1S3CH02 RNA-binding protein with multiple splicing5.5e-16898.69Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAA PPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQY
        MRIQ+
Subjt:  MRIQY

A0A5A7V0M8 RNA-binding protein with multiple splicing9.7e-17395.72Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAA PPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFLYQIAFF----DASYRMIMP
        MRIQYPFLYQI  F    DA+Y +  P
Subjt:  MRIQYPFLYQIAFF----DASYRMIMP

A0A5D3BWV1 RNA-binding protein with multiple splicing7.2e-17696.63Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAA PPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFLYQIAFFDASYRMIMPILM
        MRIQYPFLYQI F+  S R I+PIL+
Subjt:  MRIQYPFLYQIAFFDASYRMIMPILM

A0A6J1GPN3 RNA-binding protein with multiple splicing 2 isoform X11.4e-17194.79Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPP PPPQAA A PPPIPHPHPPQILVDNP RHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSN QLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADA+AYDQSKRLRTGGDYAHT YSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVP+PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGL SVQ GFKQMKILRQERHTVCFIEFEDVNTATNVHH+LQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFLYQIAFFDASYRMIMPILM
        MRIQYPFLYQ   FDASYR I+PIL+
Subjt:  MRIQYPFLYQIAFFDASYRMIMPILM

A0A6J1JT78 U1 small nuclear ribonucleoprotein A-like isoform X11.3e-16993.87Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPP PPPQAA A PPPIPHPHPPQILVDNP RHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSN QLAIAAKDALQDMVFDA+SKSVLHTEMAKKNLFVKRGIVADA+AYDQSKRLRTGGDYAHT YSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVP+PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGL S Q GFKQMKILRQERHTVCFIEFEDVNTATNVHH+LQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFLYQIAFFDASYRMIMPILM
        MRIQYPFLY    FDASYR I+PIL+
Subjt:  MRIQYPFLYQIAFFDASYRMIMPILM

SwissProt top hitse value%identityAlignment
Q6ZRY4 RNA-binding protein with multiple splicing 21.7e-1243.68Show/hide
Query:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKN
        G    +EVRT+F++GLP D+K REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q8VC52 RNA-binding protein with multiple splicing 21.3e-1243.68Show/hide
Query:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKN
        G    +EVRT+F++GLP D+K REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q93062 RNA-binding protein with multiple splicing6.2e-0730.36Show/hide
Query:  DEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSK
        +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD E    L  E AK N  + +  +          
Subjt:  DEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSK

Query:  RLRTGGDYAHTGYSSPSP-FHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVP
                A   Y    P  +   P +W P+       P Y       +PP     PA + A   ++P
Subjt:  RLRTGGDYAHTGYSSPSP-FHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVP

Q9W6I1 RNA-binding protein with multiple splicing 23.6e-0731.32Show/hide
Query:  NPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD
        N G +  +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD E+   L  E AK N    K  ++A 
Subjt:  NPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD

Query:  ASAYDQSKRLRTGGDY-AHTGYSSPSPFHAP-PPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTK
         +  +    L  G  + A   Y        P  P  W P+        P  P+  +  P     A A       Y P + T+
Subjt:  ASAYDQSKRLRTGGDY-AHTGYSSPSPFHAP-PPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTK

Q9YGP5 RNA-binding protein with multiple splicing 21.9e-0831.29Show/hide
Query:  DNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVA
        ++   +  +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F N   A AAK+AL  + FD E+   L  E AK N    K  ++A
Subjt:  DNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVA

Query:  DASAYDQSKRLRTGGDYAHTGYSSPSPFHA-----PPPPIWGPHGYMAPPPPPYDPYGGYPVP
          +  +    L      AH     P  F         P  W P+        P  P+  +  P
Subjt:  DASAYDQSKRLRTGGDYAHTGYSSPSPFHA-----PPPPIWGPHGYMAPPPPPYDPYGGYPVP

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-2836.96Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP       P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P    
Subjt:  QLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV

Query:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS--GSVGMR
         + A     AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS  G V +R
Subjt:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS--GSVGMR

Query:  IQY
        +QY
Subjt:  IQY

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-3037.3Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP       P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P    
Subjt:  QLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV

Query:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS--GSVGMR
         + A     AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS  G V +R
Subjt:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS--GSVGMR

Query:  IQYPFLYQIAF
        +QYP L  I F
Subjt:  IQYPFLYQIAF

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein8.5e-2836.64Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP       P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P    
Subjt:  QLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV

Query:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS
         + A     AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS
Subjt:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-2131.69Show/hide
Query:  PHPHPPQ--ILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEM
        PH  PPQ  +L D PG      + T+F++GLP DVK RE+ NL R   G+E+ Q+ +  +G++ + FA F++ + A+AA + L  + FD ++ S LH E+
Subjt:  PHPHPPQ--ILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEM

Query:  AKKNLFVKRG------IVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTK
        A+ N   K        +V D    + SK   +  D +  G S P     P           +  P   D             +     APS+   ++   
Subjt:  AKKNLFVKRG------IVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTK

Query:  DN----PPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGMRIQY
        +       C+TLFI NLG N  E+EL+ L S  PGF  +KI  +    V F +FE++  AT+  + LQG ++ SS   GM I+Y
Subjt:  DN----PPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGMRIQY

AT3G21215.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-13580.91Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIP---HPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMG
        MAG GIHPYHQQWP  A APPPP   ++AAPP P P   HP PP +LVDN  R   DE+RTIFI GLP+DVKEREL NLLRWLPGYEASQVNFKGEKPMG
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIP---HPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMG

Query:  FALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYDPY
        FALFS AQ A+AAKD LQ MVFDAESKSV+HTEMAKKNLFVKRGIV D++AYDQSKRLRTGGD  H+ Y SPSPFH PPPP+WG PHGYMAP PPPYDPY
Subjt:  FALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYDPY

Query:  GGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS
         GY  PPVPMP P P+ APSSYVPVQN KDNPPCNTLFIGNLGEN+NEEELR L S QPGFKQMKILRQERHTVCFIEFEDVN+ATNVHH+LQGAVIPSS
Subjt:  GGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS

Query:  GSVGMRIQY
        GS+GMRIQY
Subjt:  GSVGMRIQY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTACTGGAATTCACCCGTACCACCAGCAATGGCCTGCGGCGGCGGCCGCTCCTCCTCCGCCTCCGCCACAAGCCGCCGCCGCCCCTCCTCCCCCTATTCCACA
TCCCCATCCTCCTCAGATCCTCGTCGACAATCCCGGCCGCCACGCCTCCGATGAGGTTCGAACTATATTTATAACAGGTCTTCCTGAAGATGTAAAAGAGAGAGAGCTAC
AGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGGGAAAAGCCTATGGGATTTGCTCTCTTCTCCAATGCCCAGCTTGCTATTGCTGCC
AAAGATGCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGCATTGTTGCTGATGCAAG
TGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGGGACTATGCCCACACCGGATATTCAAGCCCATCACCTTTTCATGCGCCTCCACCCCCTATTTGGGGACCTCATG
GGTATATGGCTCCACCTCCTCCTCCATATGATCCCTATGGAGGTTACCCTGTTCCTCCTGTACCCATGCCTGCTCCTGCACCTGTACCAGCACCCAGCAGCTATGTGCCT
GTTCAGAACACAAAAGATAATCCTCCTTGCAATACCCTGTTTATTGGCAATCTGGGGGAAAATGTAAATGAAGAAGAGCTCAGAGGTCTTTTTAGCGTACAACCTGGATT
TAAGCAAATGAAGATTCTGAGGCAGGAAAGGCATACAGTTTGCTTCATTGAGTTTGAAGATGTGAACACTGCCACTAATGTGCATCATAGTTTGCAGGGCGCAGTTATTC
CTAGTTCTGGCTCTGTGGGCATGAGAATACAATATCCTTTTCTTTACCAAATTGCTTTCTTTGATGCTAGTTATAGAATGATCATGCCCATCCTAATGCGTACAGGTGAT
ATGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTACTGGAATTCACCCGTACCACCAGCAATGGCCTGCGGCGGCGGCCGCTCCTCCTCCGCCTCCGCCACAAGCCGCCGCCGCCCCTCCTCCCCCTATTCCACA
TCCCCATCCTCCTCAGATCCTCGTCGACAATCCCGGCCGCCACGCCTCCGATGAGGTTCGAACTATATTTATAACAGGTCTTCCTGAAGATGTAAAAGAGAGAGAGCTAC
AGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGGGAAAAGCCTATGGGATTTGCTCTCTTCTCCAATGCCCAGCTTGCTATTGCTGCC
AAAGATGCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGCATTGTTGCTGATGCAAG
TGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGGGACTATGCCCACACCGGATATTCAAGCCCATCACCTTTTCATGCGCCTCCACCCCCTATTTGGGGACCTCATG
GGTATATGGCTCCACCTCCTCCTCCATATGATCCCTATGGAGGTTACCCTGTTCCTCCTGTACCCATGCCTGCTCCTGCACCTGTACCAGCACCCAGCAGCTATGTGCCT
GTTCAGAACACAAAAGATAATCCTCCTTGCAATACCCTGTTTATTGGCAATCTGGGGGAAAATGTAAATGAAGAAGAGCTCAGAGGTCTTTTTAGCGTACAACCTGGATT
TAAGCAAATGAAGATTCTGAGGCAGGAAAGGCATACAGTTTGCTTCATTGAGTTTGAAGATGTGAACACTGCCACTAATGTGCATCATAGTTTGCAGGGCGCAGTTATTC
CTAGTTCTGGCTCTGTGGGCATGAGAATACAATATCCTTTTCTTTACCAAATTGCTTTCTTTGATGCTAGTTATAGAATGATCATGCCCATCCTAATGCGTACAGGTGAT
ATGCACTGA
Protein sequenceShow/hide protein sequence
MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAPPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAA
KDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVP
VQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGMRIQYPFLYQIAFFDASYRMIMPILMRTGD
MH