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Lag0003203 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0003203
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L7
Genome locationchr4:48963437..48965591
RNA-Seq ExpressionLag0003203
SyntenyLag0003203
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR036919 - Ribosomal protein L30, ferredoxin-like fold domain superfamily
IPR039699 - Ribosomal protein L7/L30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059342.1 60S ribosomal protein L7-4 [Cucumis melo var. makuwa]4.7e-3576.24Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  +ALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

PPD71888.1 hypothetical protein GOBAR_DD31206 [Gossypium barbadense]6.1e-3564.75Show/hide
Query:  YGISQAVSR--------KGWNSPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNH
        YG+ +++S+            S K+   K GF + + + V   D A++  +ALGK+GI+ VEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNH
Subjt:  YGISQAVSR--------KGWNSPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNH

Query:  YVEGGDAGNRENYINELIRRMN
        YVEGGDAGNRENYINELIRRMN
Subjt:  YVEGGDAGNRENYINELIRRMN

TYK03983.1 60S ribosomal protein L7-4 [Cucumis melo var. makuwa]4.7e-3576.24Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  +ALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

XP_008462217.1 PREDICTED: 60S ribosomal protein L7-4 [Cucumis melo]4.7e-3576.24Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  +ALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

XP_011659589.1 60S ribosomal protein L7-4 [Cucumis sativus]4.7e-3576.24Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  +ALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0A0KCA3 Uncharacterized protein2.3e-3576.24Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  +ALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

A0A0B0N1Q9 60S ribosomal L7-4-like protein1.1e-3475.25Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + + V   D A++  +ALGK+GI+ VEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

A0A1S3CGH3 60S ribosomal protein L7-42.3e-3576.24Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  +ALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

A0A5A7UTW1 60S ribosomal protein L7-42.3e-3576.24Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  +ALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

A0A5D3BW58 60S ribosomal protein L7-42.3e-3576.24Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  +ALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

SwissProt top hitse value%identityAlignment
P18124 60S ribosomal protein L77.5e-2861.7Show/hide
Query:  KFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        K G+ + + + +   D AL++ ++LGK+GI+ +EDLIHEI TVG  FKEANNFLWPFKL +P GG+KKK  H+VEGGDAGNRE+ IN LIRRMN
Subjt:  KFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

P60039 60S ribosomal protein L7-35.7e-3670.3Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K G+ + + + +   D +++  +ALGKHGI+ VEDLIHEIMTVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

P60040 60S ribosomal protein L7-22.8e-3569.31Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K G+ + + + +   D +++  +ALGKHGI+  EDLIHEI+TVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

Q58DT1 60S ribosomal protein L77.5e-2861.7Show/hide
Query:  KFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        K G+ + + + +   D AL++ ++LGK+GI+ +EDLIHEI TVG  FKEANNFLWPFKL +P GG+KKK  H+VEGGDAGNRE+ IN LIRRMN
Subjt:  KFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

Q9LHP1 60S ribosomal protein L7-42.8e-3569.31Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  + LGKHGI+ VEDLIHEIMTVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

Arabidopsis top hitse value%identityAlignment
AT2G01250.1 Ribosomal protein L30/L7 family protein2.0e-3669.31Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K G+ + + + +   D +++  +ALGKHGI+  EDLIHEI+TVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

AT2G44120.1 Ribosomal protein L30/L7 family protein4.1e-3770.3Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K G+ + + + +   D +++  +ALGKHGI+ VEDLIHEIMTVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

AT2G44120.2 Ribosomal protein L30/L7 family protein4.1e-3770.3Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K G+ + + + +   D +++  +ALGKHGI+ VEDLIHEIMTVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

AT3G13580.2 Ribosomal protein L30/L7 family protein2.0e-3669.31Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  + LGKHGI+ VEDLIHEIMTVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N

AT3G13580.3 Ribosomal protein L30/L7 family protein2.0e-3669.31Show/hide
Query:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM
        S K+   K GF + + +     D +++  + LGKHGI+ VEDLIHEIMTVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRM
Subjt:  SPKQFPGKFGFARFHPETVLYADIALLSHKALGKHGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM

Query:  N
        N
Subjt:  N


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAACCCCATTATGTCAGTTTTATATTCAAGGATTCTATATTTCAGTTTCGTCGAGCTGCGAAGGACCGGGACAATTCAGCTTTGCTCAGAATGATGTCGAACTA
CGGGGAAGAAGTGGTTACTGCTCTAGGAAGCGAAGTGGATAGGCTAGAGAAAGAGATCCAGGAGCTCGTTCCTGGAAAGTATGGAATTTCACAAGCAGTTTCCAGGAAAG
GTTGGAATTCCCCCAAGCAGTTTCCAGGAAAGTTTGGGTTTGCACGATTCCATCCCGAAACTGTCTTGTATGCTGACATAGCTCTCTTGTCTCATAAGGCGTTAGGTAAA
CATGGAATTTTGAGCGTGGAAGATCTTATTCACGAGATCATGACGGTTGGACCTCATTTTAAAGAGGCAAATAACTTCTTGTGGCCATTCAAGCTCAAGGCGCCGTTGGG
TGGTTTGAAGAAGAAGAGGAATCACTATGTTGAAGGAGGAGACGCCGGCAATCGTGAAAATTATATCAACGAGCTTATCAGAAGAATGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAACCCCATTATGTCAGTTTTATATTCAAGGATTCTATATTTCAGTTTCGTCGAGCTGCGAAGGACCGGGACAATTCAGCTTTGCTCAGAATGATGTCGAACTA
CGGGGAAGAAGTGGTTACTGCTCTAGGAAGCGAAGTGGATAGGCTAGAGAAAGAGATCCAGGAGCTCGTTCCTGGAAAGTATGGAATTTCACAAGCAGTTTCCAGGAAAG
GTTGGAATTCCCCCAAGCAGTTTCCAGGAAAGTTTGGGTTTGCACGATTCCATCCCGAAACTGTCTTGTATGCTGACATAGCTCTCTTGTCTCATAAGGCGTTAGGTAAA
CATGGAATTTTGAGCGTGGAAGATCTTATTCACGAGATCATGACGGTTGGACCTCATTTTAAAGAGGCAAATAACTTCTTGTGGCCATTCAAGCTCAAGGCGCCGTTGGG
TGGTTTGAAGAAGAAGAGGAATCACTATGTTGAAGGAGGAGACGCCGGCAATCGTGAAAATTATATCAACGAGCTTATCAGAAGAATGAACTAA
Protein sequenceShow/hide protein sequence
MLKPHYVSFIFKDSIFQFRRAAKDRDNSALLRMMSNYGEEVVTALGSEVDRLEKEIQELVPGKYGISQAVSRKGWNSPKQFPGKFGFARFHPETVLYADIALLSHKALGK
HGILSVEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN