CuGenDBv2

Gene ID	Lag0003221
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Helicase SEN1 isoform X4
Genome location	chr4:49154805..49157759
RNA-Seq Expression	Lag0003221
Synteny	Lag0003221
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575386.1 hypothetical protein SDJN03_26025, partial [Cucurbita argyrosperma subsp. sororia]

5.6e-50

68.07

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKLLQEGDSPHSAL  +SSNHTDVTNTSSQGGFLRQPVFD  MLN GKQ++KVNS LLQQFSCLLSKAAWPSIWRLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI
        GKAFLDYSFCQ + V +L+   +  V  R   S+   S N M   +   F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI

KAG7013925.1 SPBC29A10.10c [Cucurbita argyrosperma subsp. argyrosperma]

5.6e-50

68.07

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKLLQEGDSPHSAL  +SSNHTDVTNTSSQGGFLRQPVFD  MLN GKQ++KVNS LLQQFSCLLSKAAWPSIWRLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI
        GKAFLDYSFCQ + V +L+   +  V  R   S+   S N M   +   F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI

XP_022953568.1 uncharacterized protein LOC111456069 isoform X1 [Cucurbita moschata]

1.6e-49

67.47

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKLLQEGDSPHSAL  +SSNHTDVTNTSSQGGFLRQPVFD  MLN GKQ++KVNS LLQQFSCLLSKAAWPSIWRLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI
        GKAF DYSFCQ + V +L+   +  V  R   S+   S N M   +   F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI

XP_022953569.1 uncharacterized protein LOC111456069 isoform X2 [Cucurbita moschata]

1.6e-49

67.47

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKLLQEGDSPHSAL  +SSNHTDVTNTSSQGGFLRQPVFD  MLN GKQ++KVNS LLQQFSCLLSKAAWPSIWRLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI
        GKAF DYSFCQ + V +L+   +  V  R   S+   S N M   +   F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI

XP_022992045.1 uncharacterized protein LOC111488514 isoform X1 [Cucurbita maxima]

2.8e-49

67.47

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKLLQEGDSPHSAL  +SSNH DVTNTSSQGGFLRQPVFD  MLN GKQ++KVNS LLQQFSCLLSKAAWPSIWRLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI
        GKAFLDYSFCQ + V +L+   +  V  R   S+   S N M   +   F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7V0K3 Helicase SEN1 isoform X4

3.4e-45

65.66

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKL+ EGDS HSAL E+ SNHTDVTNTSSQGGFLRQPVFD SMLNFGKQS+KVNS LLQQFSCLLS AAWPSI RLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKS-VWSSRNIMNFEHLIDFGELADFLEWTNLERKI
        GK FLDYS+CQ + V +L+   +  V  R   S V  S   M  +    F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKS-VWSSRNIMNFEHLIDFGELADFLEWTNLERKI

A0A6J1GNN5 uncharacterized protein LOC111456069 isoform X1

7.9e-50

67.47

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKLLQEGDSPHSAL  +SSNHTDVTNTSSQGGFLRQPVFD  MLN GKQ++KVNS LLQQFSCLLSKAAWPSIWRLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI
        GKAF DYSFCQ + V +L+   +  V  R   S+   S N M   +   F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI

A0A6J1GQ23 uncharacterized protein LOC111456069 isoform X2

7.9e-50

67.47

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKLLQEGDSPHSAL  +SSNHTDVTNTSSQGGFLRQPVFD  MLN GKQ++KVNS LLQQFSCLLSKAAWPSIWRLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI
        GKAF DYSFCQ + V +L+   +  V  R   S+   S N M   +   F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI

A0A6J1JSH1 helicase SEN1 isoform X2

1.4e-49

67.47

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKLLQEGDSPHSAL  +SSNH DVTNTSSQGGFLRQPVFD  MLN GKQ++KVNS LLQQFSCLLSKAAWPSIWRLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI
        GKAFLDYSFCQ + V +L+   +  V  R   S+   S N M   +   F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI

A0A6J1JUM0 uncharacterized protein LOC111488514 isoform X1

1.4e-49

67.47

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Query:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE
        +VQMDSILVKFQNLH+LFFILRKLLQEGDSPHSAL  +SSNH DVTNTSSQGGFLRQPVFD  MLN GKQ++KVNS LLQQFSCLLSKAAWPSIWRLLVE
Subjt:  MVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVE

Query:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI
        GKAFLDYSFCQ + V +L+   +  V  R   S+   S N M   +   F  L D ++W     K+
Subjt:  GKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWS-SRNIMNFEHLIDFGELADFLEWTNLERKI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16800.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

5.0e-12

39.83

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Query:  VQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVEG
        V + S+L  FQ LH+ FF+L KLL+E +             TDV   SS GGFLRQP F+   ++ G+        LL +F  LL++ AW  I + LVEG
Subjt:  VQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNFGKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVEG

Query:  KAFLDYSFCQNSDVVILQ
        K F+  S CQ + V +L+
Subjt:  KAFLDYSFCQNSDVVILQ

Sequences

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CDS sequence

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ATGGTCTTCCCCGCTTCAGTCACTACTAAAATAGCATCAAGAATTTGTCTACCATGCACGAAAGCTGCTTGGCAATCACTAATGCCTAATGATTTTTTGGAGAATGAAGT
GGAGATAGACAAGGATTCCATGGTTCAGATGGATTCTATTCTTGTGAAATTTCAGAATTTGCATAATTTGTTCTTCATACTTCGTAAGCTACTACAGGAAGGTGATTCAC
CTCATTCAGCTTTGACAGAAAGTTCATCCAATCATACAGATGTCACAAATACCTCTTCTCAAGGTGGATTTCTTAGACAGCCAGTTTTTGATGGATCGATGCTGAACTTT
GGCAAACAATCTGCGAAAGTTAATTCTAACTTGCTCCAACAGTTCAGTTGTTTACTATCCAAAGCAGCGTGGCCTTCTATTTGGAGGCTATTGGTTGAAGGAAAGGCATT
TCTCGATTACAGTTTTTGTCAAAATTCAGATGTAGTTATCTTACAAGAATCTGGATTAAATCATGTTGATAGTAGGCTTGTGAAGTCAGTTTGGAGTTCTAGGAATATCA
TGAATTTTGAGCATTTGATTGATTTTGGTGAGCTGGCAGATTTTCTGGAGTGGACGAATTTGGAGAGAAAGATTGATTCCGGGAAAGAGGCGGATTTGAATTTGGAGAGG
GAGAATCACGATTATTGGAGATATTTGTGGGAGCTAGTTCGTTGGAGATATTTGTGGGAGCTAGTTCGTTGGAGATATTTGTGGGATTTGAGGATGGTGTAG

mRNA sequence

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Protein sequence

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MVFPASVTTKIASRICLPCTKAAWQSLMPNDFLENEVEIDKDSMVQMDSILVKFQNLHNLFFILRKLLQEGDSPHSALTESSSNHTDVTNTSSQGGFLRQPVFDGSMLNF
GKQSAKVNSNLLQQFSCLLSKAAWPSIWRLLVEGKAFLDYSFCQNSDVVILQESGLNHVDSRLVKSVWSSRNIMNFEHLIDFGELADFLEWTNLERKIDSGKEADLNLER
ENHDYWRYLWELVRWRYLWELVRWRYLWDLRMV

Lag0003221 (gene) of Sponge gourd (AG-4) v1 genome