| GenBank top hits | e value | %identity | Alignment |
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| KAA0039966.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.9e-44 | 31.19 | Show/hide |
Query: FSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD-----------------------------GFVSNRQILDASLIASELIDDWKTT
F++EE++ A+ NKS GPDGFT EF+K +W+ +K+++ I D FV RQI+DA L+A+E ID W+
Subjt: FSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD-----------------------------GFVSNRQILDASLIASELIDDWKTT
Query: NKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRF----------------------GR-------------GDPLLPFLFILVFDCLSRLLTYSAQLGK
K + G VIKLD+E+AFDK++W F+D +L K + GR GDP+ PF+F+L D +SRLL + K
Subjt: NKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRF----------------------GR-------------GDPLLPFLFILVFDCLSRLLTYSAQLGK
Query: ITTHPIGNSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGSKDDGGL-
I + ++NLTHL FA+D LLF D + NL +II +F+LA GL+IN KS + INV E + S +G P++YLG+PLGG +
Subjt: ITTHPIGNSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGSKDDGGL-
Query: ----HNINWKTTQLPHIMGGLGIT------IEMDYVG------GQNQSQEDRQNLFGSICSTIDIVAWDMRLRRNLNEEEVLEWASL-HLLSSVILRNSQ
IN K T + M G D+ G G+++ ++++ + ++ WD+ RR + + E WA L + L+ N +
Subjt: ----HNINWKTTQLPHIMGGLGIT------IEMDYVG------GQNQSQEDRQNLFGSICSTIDIVAWDMRLRRNLNEEEVLEWASL-HLLSSVILRNSQ
Query: DSWSWPLDSSHAFIVRSLRE
DS +W L+S + V S+++
Subjt: DSWSWPLDSSHAFIVRSLRE
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| RVW38475.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | 2.0e-41 | 28.51 | Show/hide |
Query: LETPFSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD-----------------------------------GFVSNRQILDASLIA
L++PF++EE+ A+ L +K+ GPDGFT F+ W IK+D++ ++SD FV RQILDA LIA
Subjt: LETPFSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD-----------------------------------GFVSNRQILDASLIA
Query: SELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRFG-----------------------------------RGDPLLPFLFILVFDCLSR
+E++D+ + G GVV K+D E+A+D V W+FLD VL+ K F +GDPL PFLF LV D LSR
Subjt: SELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRFG-----------------------------------RGDPLLPFLFILVFDCLSR
Query: LLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLP
+L + + + +G N ++HL+FA+DT+ FS + L ++ VF GL +N KS + GIN+D + L CK WP+ YLGLP
Subjt: LLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLP
Query: LGGSKDDGGL-------------HNINWKTTQLPHIMGGLGITIEMDYVGGQNQSQE------------------------DRQNLFGSICSTIDIVAWD
LGG+ G H WK + + G + YV G + D+ S+ +W+
Subjt: LGGSKDDGGL-------------HNINWKTTQLPHIMGGLGITIEMDYVGGQNQSQE------------------------DRQNLFGSICSTIDIVAWD
Query: MRLRRNLNEEEV--LEWASLHLLSSVILRNSQDSWSWPLDSSHAFIVRSLREDSVHSKGPNRNNLYSMIW
+ RRNL+ E+ LE L + + D+ WPL SS F V+S S G +N +W
Subjt: MRLRRNLNEEEV--LEWASLHLLSSVILRNSQDSWSWPLDSSHAFIVRSLREDSVHSKGPNRNNLYSMIW
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| RVW90164.1 putative mitochondrial protein [Vitis vinifera] | 3.0e-42 | 38.77 | Show/hide |
Query: LETPFSKEEVYLAVQTLGTNKSLGPDGFT----DEFFKHSWTTIKQDVMAILSDGFVSNRQILDASLIASELIDDWKTTNKKGVVGVVIKLDLERAFDKV
L++PF++ E++ A+ L +K+ GPDGFT + + Q+ + FV RQILDA LIA+E++D+ K + G GVV K+D E+A++ V
Subjt: LETPFSKEEVYLAVQTLGTNKSLGPDGFT----DEFFKHSWTTIKQDVMAILSDGFVSNRQILDASLIASELIDDWKTTNKKGVVGVVIKLDLERAFDKV
Query: DWNFLDAVLQAKRFG--RGDPLLPFLFILVFDCLSRLLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYA
W+FLD VL+ K G +GDPL PFLF +V D LSR+L + + + +G N +THL+FA+DT+LF++ + L ++ VF GL +N
Subjt: DWNFLDAVLQAKRFG--RGDPLLPFLFILVFDCLSRLLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYA
Query: KSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGSKD----------DGGL-HNINWKTTQLPHIMGGLGI
KS L GIN+D + L CK DWP+ YLGLPLGG + +G H + W+ P I+GGLGI
Subjt: KSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGSKD----------DGGL-HNINWKTTQLPHIMGGLGI
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| RVW96282.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | 6.9e-39 | 35.84 | Show/hide |
Query: LETPFSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD--------------------------------------GFVSNRQILDAS
L++PF++ E++ A+ L +K+ GPDGFT F+ W IK+D++ + ++ FV RQILDA
Subjt: LETPFSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD--------------------------------------GFVSNRQILDAS
Query: LIASELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQ-------AKRFGRGDPLLPFLFILVFDCLSRLLTYSAQLGKITTHPIG-NSLNLTH
LI +E++D+ K + G GVV K+D E+A+D V W+FLD VL+ A+ +GDPL PFLF +V D LSR+L + + + +G N ++H
Subjt: LIASELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQ-------AKRFGRGDPLLPFLFILVFDCLSRLLTYSAQLGKITTHPIG-NSLNLTH
Query: LRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGS
L+FA+DT+LF++ V L ++ VF GL +N KS L GIN+D + L CK DWP+ YLGLPLGG+
Subjt: LRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGS
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| TYK24536.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.1e-43 | 30.39 | Show/hide |
Query: FSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD----------------------------------------GFVSNRQILDASLI
F++EE++ A+ NKS GPDGFT EF+K +W+ +K+++ I D FV RQI+DA L+
Subjt: FSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD----------------------------------------GFVSNRQILDASLI
Query: ASELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRF----------------------GR-------------GDPLLPFLFILVFDCLS
A+E ID W+ K + G VIKLD+E+AFDK++W F+D +L K + GR GDP+ PF+F+L D +S
Subjt: ASELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRF----------------------GR-------------GDPLLPFLFILVFDCLS
Query: RLLTYSAQLGKITTHPIGNSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLP
RLL + KI + ++NLTHL FA+D LLF D + NL +II +F+LA GL+IN KS + INV E + S +G P++YLG+P
Subjt: RLLTYSAQLGKITTHPIGNSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLP
Query: LGGSKDDGGL-----HNINWKTTQLPHIMGGLGIT------IEMDYVG------GQNQSQEDRQNLFGSICSTIDIVAWDMRLRRNLNEEEVLEWASL-H
LGG + IN K T + M G D+ G G+++ ++++ + ++ WD+ RR + + E WA L +
Subjt: LGGSKDDGGL-----HNINWKTTQLPHIMGGLGIT------IEMDYVG------GQNQSQEDRQNLFGSICSTIDIVAWDMRLRRNLNEEEVLEWASL-H
Query: LLSSVILRNSQDSWSWPLDSSHAFIVRSLRE
L+ N +DS +W L+S + V S+++
Subjt: LLSSVILRNSQDSWSWPLDSSHAFIVRSLRE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438DSJ8 Transposon TX1 uncharacterized 149 kDa protein | 9.5e-42 | 28.51 | Show/hide |
Query: LETPFSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD-----------------------------------GFVSNRQILDASLIA
L++PF++EE+ A+ L +K+ GPDGFT F+ W IK+D++ ++SD FV RQILDA LIA
Subjt: LETPFSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD-----------------------------------GFVSNRQILDASLIA
Query: SELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRFG-----------------------------------RGDPLLPFLFILVFDCLSR
+E++D+ + G GVV K+D E+A+D V W+FLD VL+ K F +GDPL PFLF LV D LSR
Subjt: SELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRFG-----------------------------------RGDPLLPFLFILVFDCLSR
Query: LLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLP
+L + + + +G N ++HL+FA+DT+ FS + L ++ VF GL +N KS + GIN+D + L CK WP+ YLGLP
Subjt: LLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLP
Query: LGGSKDDGGL-------------HNINWKTTQLPHIMGGLGITIEMDYVGGQNQSQE------------------------DRQNLFGSICSTIDIVAWD
LGG+ G H WK + + G + YV G + D+ S+ +W+
Subjt: LGGSKDDGGL-------------HNINWKTTQLPHIMGGLGITIEMDYVGGQNQSQE------------------------DRQNLFGSICSTIDIVAWD
Query: MRLRRNLNEEEV--LEWASLHLLSSVILRNSQDSWSWPLDSSHAFIVRSLREDSVHSKGPNRNNLYSMIW
+ RRNL+ E+ LE L + + D+ WPL SS F V+S S G +N +W
Subjt: MRLRRNLNEEEV--LEWASLHLLSSVILRNSQDSWSWPLDSSHAFIVRSLREDSVHSKGPNRNNLYSMIW
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| A0A438F983 Putative ribonuclease H protein | 3.4e-39 | 37.17 | Show/hide |
Query: LETPFSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSDGFVSNRQILDASLIASELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNF
L++PF++EE+ A+ L +K+ GPDGFT F+ W IK+D++ + FV RQILDA LIA+E++D+ + G GVV K+D E+A+D V W+F
Subjt: LETPFSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSDGFVSNRQILDASLIASELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNF
Query: LDAVLQAKRFG-----------------------------------RGDPLLPFLFILVFDCLSRLLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLF
LD VL+ K F +GDPL PFLF LV D LSR+L + + + +G N ++HL+FA+DT+ F
Subjt: LDAVLQAKRFG-----------------------------------RGDPLLPFLFILVFDCLSRLLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLF
Query: STLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGS
S + L ++ VF GL +N KS + GIN+D + L CK WP+ YLGLPLGG+
Subjt: STLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGS
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| A0A438I0B4 Putative mitochondrial protein | 1.5e-42 | 38.77 | Show/hide |
Query: LETPFSKEEVYLAVQTLGTNKSLGPDGFT----DEFFKHSWTTIKQDVMAILSDGFVSNRQILDASLIASELIDDWKTTNKKGVVGVVIKLDLERAFDKV
L++PF++ E++ A+ L +K+ GPDGFT + + Q+ + FV RQILDA LIA+E++D+ K + G GVV K+D E+A++ V
Subjt: LETPFSKEEVYLAVQTLGTNKSLGPDGFT----DEFFKHSWTTIKQDVMAILSDGFVSNRQILDASLIASELIDDWKTTNKKGVVGVVIKLDLERAFDKV
Query: DWNFLDAVLQAKRFG--RGDPLLPFLFILVFDCLSRLLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYA
W+FLD VL+ K G +GDPL PFLF +V D LSR+L + + + +G N +THL+FA+DT+LF++ + L ++ VF GL +N
Subjt: DWNFLDAVLQAKRFG--RGDPLLPFLFILVFDCLSRLLTYSAQLGKITTHPIG-NSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYA
Query: KSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGSKD----------DGGL-HNINWKTTQLPHIMGGLGI
KS L GIN+D + L CK DWP+ YLGLPLGG + +G H + W+ P I+GGLGI
Subjt: KSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGSKD----------DGGL-HNINWKTTQLPHIMGGLGI
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| A0A5A7TCY9 LINE-1 retrotransposable element ORF2 protein | 9.1e-45 | 31.19 | Show/hide |
Query: FSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD-----------------------------GFVSNRQILDASLIASELIDDWKTT
F++EE++ A+ NKS GPDGFT EF+K +W+ +K+++ I D FV RQI+DA L+A+E ID W+
Subjt: FSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD-----------------------------GFVSNRQILDASLIASELIDDWKTT
Query: NKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRF----------------------GR-------------GDPLLPFLFILVFDCLSRLLTYSAQLGK
K + G VIKLD+E+AFDK++W F+D +L K + GR GDP+ PF+F+L D +SRLL + K
Subjt: NKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRF----------------------GR-------------GDPLLPFLFILVFDCLSRLLTYSAQLGK
Query: ITTHPIGNSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGSKDDGGL-
I + ++NLTHL FA+D LLF D + NL +II +F+LA GL+IN KS + INV E + S +G P++YLG+PLGG +
Subjt: ITTHPIGNSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLPLGGSKDDGGL-
Query: ----HNINWKTTQLPHIMGGLGIT------IEMDYVG------GQNQSQEDRQNLFGSICSTIDIVAWDMRLRRNLNEEEVLEWASL-HLLSSVILRNSQ
IN K T + M G D+ G G+++ ++++ + ++ WD+ RR + + E WA L + L+ N +
Subjt: ----HNINWKTTQLPHIMGGLGIT------IEMDYVG------GQNQSQEDRQNLFGSICSTIDIVAWDMRLRRNLNEEEVLEWASL-HLLSSVILRNSQ
Query: DSWSWPLDSSHAFIVRSLRE
DS +W L+S + V S+++
Subjt: DSWSWPLDSSHAFIVRSLRE
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| A0A5D3DLM2 LINE-1 retrotransposable element ORF2 protein | 1.0e-43 | 30.39 | Show/hide |
Query: FSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD----------------------------------------GFVSNRQILDASLI
F++EE++ A+ NKS GPDGFT EF+K +W+ +K+++ I D FV RQI+DA L+
Subjt: FSKEEVYLAVQTLGTNKSLGPDGFTDEFFKHSWTTIKQDVMAILSD----------------------------------------GFVSNRQILDASLI
Query: ASELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRF----------------------GR-------------GDPLLPFLFILVFDCLS
A+E ID W+ K + G VIKLD+E+AFDK++W F+D +L K + GR GDP+ PF+F+L D +S
Subjt: ASELIDDWKTTNKKGVVGVVIKLDLERAFDKVDWNFLDAVLQAKRF----------------------GR-------------GDPLLPFLFILVFDCLS
Query: RLLTYSAQLGKITTHPIGNSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLP
RLL + KI + ++NLTHL FA+D LLF D + NL +II +F+LA GL+IN KS + INV E + S +G P++YLG+P
Subjt: RLLTYSAQLGKITTHPIGNSLNLTHLRFANDTLLFSTLDSFIVDNLFDIIKVFELAFGLNINYAKSELLGINVDDLEIEALTSNFGCKPGDWPVSYLGLP
Query: LGGSKDDGGL-----HNINWKTTQLPHIMGGLGIT------IEMDYVG------GQNQSQEDRQNLFGSICSTIDIVAWDMRLRRNLNEEEVLEWASL-H
LGG + IN K T + M G D+ G G+++ ++++ + ++ WD+ RR + + E WA L +
Subjt: LGGSKDDGGL-----HNINWKTTQLPHIMGGLGIT------IEMDYVG------GQNQSQEDRQNLFGSICSTIDIVAWDMRLRRNLNEEEVLEWASL-H
Query: LLSSVILRNSQDSWSWPLDSSHAFIVRSLRE
L+ N +DS +W L+S + V S+++
Subjt: LLSSVILRNSQDSWSWPLDSSHAFIVRSLRE
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