CuGenDBv2

Gene ID	Lag0003991
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reticulon domain-containing protein
Genome location	chr6:234517..237600
RNA-Seq Expression	Lag0003991
Synteny	Lag0003991
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR044177 - Reticulon-like protein B22/B23

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008465703.1 PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]

7.6e-21

84.06

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +VVVCLY+LSVLG+LVSGVTVAYTGLCMLCIYMVLENSESISA+ISPFLRRGN+ T HQDAI
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

XP_011655303.1 reticulon-like protein B22 [Cucumis sativus]

1.9e-19

81.16

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +VVVCLY+LSVLG+LVSGVTVAYTGLCMLCIYMVLENSESISA+ISP LRRGN+ T HQD I
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

XP_022150304.1 reticulon-like protein B22 [Momordica charantia]

6.5e-20

79.71

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +VVVCLY+LSVLG+LVSGVTVAYTGLCMLC+YMVLENSES S S+ PF RRGNDPT HQDAI
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

XP_022952032.1 reticulon-like protein B22 isoform X1 [Cucurbita moschata]

1.1e-19

81.16

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +V+V LY+LSVLG+LVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGNDP  HQD+I
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

XP_038889154.1 reticulon-like protein B22 [Benincasa hispida]

1.8e-22

86.96

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +VVVCLY+LSVLG+LVSGVTVAYTGLCMLCIYMVLENSESISASISPF+RRGNDPT HQDAI
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQM7 Reticulon domain-containing protein

9.1e-20

81.16

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +VVVCLY+LSVLG+LVSGVTVAYTGLCMLCIYMVLENSESISA+ISP LRRGN+ T HQD I
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

A0A1S3CPH6 reticulon-like protein B22 isoform X2

3.7e-21

84.06

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +VVVCLY+LSVLG+LVSGVTVAYTGLCMLCIYMVLENSESISA+ISPFLRRGN+ T HQDAI
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

A0A6J1D9M0 reticulon-like protein B22

3.1e-20

79.71

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +VVVCLY+LSVLG+LVSGVTVAYTGLCMLC+YMVLENSES S S+ PF RRGNDPT HQDAI
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

A0A6J1GJ96 reticulon-like protein B22 isoform X1

5.3e-20

81.16

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +V+V LY+LSVLG+LVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGNDP  HQD+I
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

A0A6J1I734 reticulon-like protein B22 isoform X1

5.3e-20

81.16

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI
        KR F   +V+V LY+LSVLG+LVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGNDP  HQD+I
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

SwissProt top hits

e value

%identity

Alignment

P0C941 Reticulon-like protein B23

1.6e-05

51.11

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENS
        KR F   +VV+CLY L+ LG+++SGVT+AY GLC+ C+ M+  +S
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENS

Q8GWH5 Reticulon-like protein B22

7.0e-09

48.53

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDA
        KR F   +VV+CLY LS LG+L+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN     Q+A
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDA

Arabidopsis top hits

e value

%identity

Alignment

AT1G16825.1 Reticulon family protein

1.1e-06

51.11

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENS
        KR F   +VV+CLY L+ LG+++SGVT+AY GLC+ C+ M+  +S
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENS

AT1G78895.1 Reticulon family protein

4.9e-10

48.53

Show/hide

Query:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDA
        KR F   +VV+CLY LS LG+L+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN     Q+A
Subjt:  KRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDA

AT4G05095.1 BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT4G04650.1)

8.7e-07

28.32

Show/hide

Query:  PGWCYLCRSSDESQDHIFATCPFAWKFWSRISKSFGWSMSLPGNLVDILASVLLGHPFTNIKGLLWMNIARAFFWILWKERNRRVFQGIDLSFDGLLRTL
        P  C LC  + E ++H+F  C  ++  W      F  S++ P   +D L  VL      NI  L+   + +A  + LWKERNRR+      S   +++ +
Subjt:  PGWCYLCRSSDESQDHIFATCPFAWKFWSRISKSFGWSMSLPGNLVDILASVLLGHPFTNIKGLLWMNIARAFFWILWKERNRRVFQGIDLSFDGLLRTL

Query:  IIFLELRFSPVCR
         + L  +  P+ R
Subjt:  IIFLELRFSPVCR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCTTACTTGTCTCTCTCCCCCGGTTGGTGTTACTTATGTAGATCTAGTGACGAATCGCAAGATCACATTTTTGCAACATGCCCCTTTGCTTGGAAGTTCTGGAGTAG
GATCTCTAAATCTTTTGGGTGGTCCATGTCTCTACCGGGTAATTTGGTGGATATCCTGGCCTCCGTTCTATTGGGACACCCTTTCACCAATATCAAAGGCCTTCTATGGA
TGAACATCGCTAGAGCCTTCTTTTGGATCTTATGGAAAGAAAGGAACAGAAGAGTTTTCCAAGGAATCGATCTCTCTTTTGATGGGCTGTTGAGGACCTTGATCATATTC
TTGGAGCTGCGATTTAGCCCAGTTTGTAGGTGTTGCAAGGAGATGTTTGAGGAGTTCCTTCTTCACCCCCTTTTCGTGAGAAAGAGGTTCTTTTGGCAAGCAAGGGTCGT
TGTTTGCCTTTACTCTCTCTCAGTGCTTGGAAAATTGGTTTCAGGTGTTACGGTTGCCTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGT
CAATCAGTGCTTCTATTTCTCCCTTTCTTAGGAGAGGAAACGACCCTACTCCACACCAAGATGCCATCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPYLSLSPGWCYLCRSSDESQDHIFATCPFAWKFWSRISKSFGWSMSLPGNLVDILASVLLGHPFTNIKGLLWMNIARAFFWILWKERNRRVFQGIDLSFDGLLRTLIIF
LELRFSPVCRCCKEMFEEFLLHPLFVRKRFFWQARVVVCLYSLSVLGKLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

Lag0003991 (gene) of Sponge gourd (AG-4) v1 genome