; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004040 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004040
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionribosome production factor 1-like
Genome locationchr6:648324..651179
RNA-Seq ExpressionLag0004040
SyntenyLag0004040
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]5.1e-16890.96Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + +IPSMIKNKEKR + H NLKHQKKLEKRKRAKARDAAEKQALELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT
        I PKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDI NHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSK KS D KG KV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]3.9e-16890.69Show/hide
Query:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH
        MGEEKK KRD+IPSMIKNKEKRK+ H NLK QKKLEKRKRAKARDA+EKQALELGEEPP R +P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK 
Subjt:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH

Query:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNP
        H  PKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDI NHGNP
Subjt:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNP

Query:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMK
        TSHEPELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSKS S D KG KV QQ+V+ RLQECGPRFTMK
Subjt:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]3.0e-16890.99Show/hide
Query:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH
        MGEEKK KRD+IPSMIKNKEKRK+ H NLK QKKLEKRKRAKARDA+EKQALELGEEPP R +P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK 
Subjt:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH

Query:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNP
        H  PKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDI NHGNP
Subjt:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNP

Query:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMK
        TSHEPELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSKS S D KG KV +Q+V+ RLQECGPRFTMK
Subjt:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]1.8e-16589.16Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + ++PS IKNKEKR + H NLKHQKKLEKRKRAKARDAAEKQALELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT
        I PK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRK+I NHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSK KS   KG KV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]2.8e-16689.76Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEE K R +IPSMIKNKEKR + H NLK+QKKLEKRKRAKARDAAEKQALELGEE P RK+P TIENTREVDET+CKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT
        I PKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDI NHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL
        SH+PELVLTNF TR+GLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSK KS D KG KV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein8.8e-16689.16Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + ++PS IKNKEKR + H NLKHQKKLEKRKRAKARDAAEKQALELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT
        I PK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRK+I NHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSK KS   KG KV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A1S3B854 ribosome production factor 1 isoform X12.5e-16890.96Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + +IPSMIKNKEKR + H NLKHQKKLEKRKRAKARDAAEKQALELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT
        I PKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDI NHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSK KS D KG KV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A5A7UHC7 Ribosome production factor 1 isoform X12.5e-16890.96Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + +IPSMIKNKEKR + H NLKHQKKLEKRKRAKARDAAEKQALELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT
        I PKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDI NHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSK KS D KG KV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DPH5 ribosome production factor 1-like1.5e-16890.99Show/hide
Query:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH
        MGEEKK KRD+IPSMIKNKEKRK+ H NLK QKKLEKRKRAKARDA+EKQALELGEEPP R +P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK 
Subjt:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH

Query:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNP
        H  PKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDI NHGNP
Subjt:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNP

Query:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMK
        TSHEPELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSKS S D KG KV +Q+V+ RLQECGPRFTMK
Subjt:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DT48 ribosome production factor 1-like1.9e-16890.69Show/hide
Query:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH
        MGEEKK KRD+IPSMIKNKEKRK+ H NLK QKKLEKRKRAKARDA+EKQALELGEEPP R +P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK 
Subjt:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH

Query:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNP
        H  PKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDI NHGNP
Subjt:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNP

Query:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMK
        TSHEPELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSKS S D KG KV QQ+V+ RLQECGPRFTMK
Subjt:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 13.0e-7047.2Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF
        S IKNKE+R   H      K+ +++++  A+   +K+   LG++ P + VP TI+N R  DET   P+DEE+      DEF+S      SPK+LITT   
Subjt:  SMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII   IA+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+I   G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELVLTNF

Query:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK
         TR+G  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Subjt:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q6IQU6 Ribosome production factor 11.6e-6847.83Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF
        S IKNK++R      LK +K+ +KR   K +   E++AL+  ++ P ++VP TIEN R  DET   P+DEE+      DEFS+      +PKVLITT   
Subjt:  SMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I   I++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++   G NPT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELVLTNF

Query:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK
         TR+G  +GRL  +LFP DP F GR+V TFHNQRDFIFFR HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Subjt:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK-PEMDTSRRRFFL
         GEYEWVHK  EMD+SRR+F L
Subjt:  GGEYEWVHK-PEMDTSRRRFFL

Q7TND5 Ribosome production factor 11.1e-6946.58Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF
        S IKNK++R   H      K+ +++++  A+   +K+   LG++ P + VP TI+N R  DET   P+DEE+      DEF+S      SPK+LITT   
Subjt:  SMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELVLTNF
                  +L +VIP++H Y R    LKKII   IA+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+I   G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELVLTNF

Query:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK
         TR+G  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF+S++                           +QE GPRFT+KL SLQ GTFDSK
Subjt:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q8AVP1 Ribosome production factor 15.1e-7046.63Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEK----RKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLIT
        S IKNK++R+     LK +K+ EK    +KR K R+A       LG++ P + VP TIEN R  DET   P DEE+      DEF+       +PK+LIT
Subjt:  SMIKNKEKRKQCHENLKHQKKLEK----RKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELV
        T          F  +L S+IPN+  Y R    LKKII   +++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++   G  PT H+PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELV

Query:  LTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGT
        L NF TR+G  +GR+  SL+P DP+F GR+V TFHNQRD+IFFR+HRY+F+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK-PEMDTSRRRFFL
        FDSK GEYEWVHK  EMDTSRR+F L
Subjt:  FDSKGGEYEWVHK-PEMDTSRRRFFL

Q9H9Y2 Ribosome production factor 16.7e-7046.89Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF
        S IKNK++R   H      K+ +++++  A+   +K+   LG++ P + VP TI+N R  DET   P+DEE+      DEF+S      SPK+LITT   
Subjt:  SMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII   IA+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+I   G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHG-NPTSHEPELVLTNF

Query:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK
         TR+G  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Subjt:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein7.6e-3737.55Show/hide
Query:  DEFSSIIKHHISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLR
        DE+++  +    PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R
Subjt:  DEFSSIIKHHISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLR

Query:  KDIMNH---GNPTSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVT
         DI +    G      P L+  NF T++G RVG +++ +FP  P    +R+VTF NQ D+I FR+H Y      +K E   KS                 
Subjt:  KDIMNH---GNPTSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVT

Query:  RLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
         L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F+
Subjt:  RLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

AT4G01560.1 Ribosomal RNA processing Brix domain protein2.7e-13572.26Show/hide
Query:  KKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPK
        +K+  ++PSMIKNK+KR + +   KH+KKLEK+K+ +ARDAAEK+ALELGEEPP + +P TIENTRE DETVC+PDDEELFA  DADEF+ +++  I+PK
Subjt:  KKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPK

Query:  VLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPTSHEP
        VL+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLI+GLP GPTAHFK+SN+VLRKDI NHGNPTSH+P
Subjt:  VLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPTSHEP

Query:  ELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQ
        ELVL NF TR+G RVGR  QSLFP DPNFRGRRVVTFHNQRDFIFFRHHRYIFE+KE+K +   K K   IK           RLQECGPRFT+KL++LQ
Subjt:  ELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQ

Query:  HGTFDSKGGEYEWVHKPEMDTSRRRFFL
        HGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  HGTFDSKGGEYEWVHKPEMDTSRRRFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGGAGAAAAAGAAGAGGGATGTCATCCCATCAATGATAAAGAACAAGGAAAAGAGAAAGCAGTGTCACGAGAACCTCAAGCACCAGAAGAAGCTTGAGAAACG
CAAGAGGGCCAAGGCTCGTGACGCTGCTGAAAAGCAAGCTCTTGAACTTGGAGAAGAACCTCCTGCTAGGAAGGTTCCTCACACCATTGAGAACACCAGGGAGGTTGATG
AGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCGGGAAATGATGCCGATGAATTTAGTTCCATCATAAAGCACCACATTTCGCCAAAAGTTCTAATAACTACTTGC
CGTTTTAACTCTACTATTGGACCTGCTTTTATATCAGAGTTACTTTCAGTGATTCCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATA
TGCAATTGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTCGGAGAAAATTGGATGGCCTTTTAATTGTTGGCTTACCTGAGGGACCGACTGCCCATTTTAAGA
TTTCAAATGTTGTCCTACGAAAGGATATTATGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACTAACTTCATAACACGCATTGGTCTCCGTGTTGGA
AGATTAATACAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTCGTAACTTTTCACAACCAACGGGATTTTATATTCTTCCGGCATCATCGTTACATTTT
TGAAAGCAAGGAAAATAAAAAAGAGGCCGACTCAAAAAGTAAATCCAACGATATCAAGGGAGTGAAAGTTTCTCAGCAAAGAGTGGTCACACGACTTCAGGAATGCGGTC
CTCGTTTCACAATGAAATTGATTAGTCTGCAGCATGGGACTTTCGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTT
TTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGGAGAAAAAGAAGAGGGATGTCATCCCATCAATGATAAAGAACAAGGAAAAGAGAAAGCAGTGTCACGAGAACCTCAAGCACCAGAAGAAGCTTGAGAAACG
CAAGAGGGCCAAGGCTCGTGACGCTGCTGAAAAGCAAGCTCTTGAACTTGGAGAAGAACCTCCTGCTAGGAAGGTTCCTCACACCATTGAGAACACCAGGGAGGTTGATG
AGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCGGGAAATGATGCCGATGAATTTAGTTCCATCATAAAGCACCACATTTCGCCAAAAGTTCTAATAACTACTTGC
CGTTTTAACTCTACTATTGGACCTGCTTTTATATCAGAGTTACTTTCAGTGATTCCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATA
TGCAATTGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTCGGAGAAAATTGGATGGCCTTTTAATTGTTGGCTTACCTGAGGGACCGACTGCCCATTTTAAGA
TTTCAAATGTTGTCCTACGAAAGGATATTATGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACTAACTTCATAACACGCATTGGTCTCCGTGTTGGA
AGATTAATACAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTCGTAACTTTTCACAACCAACGGGATTTTATATTCTTCCGGCATCATCGTTACATTTT
TGAAAGCAAGGAAAATAAAAAAGAGGCCGACTCAAAAAGTAAATCCAACGATATCAAGGGAGTGAAAGTTTCTCAGCAAAGAGTGGTCACACGACTTCAGGAATGCGGTC
CTCGTTTCACAATGAAATTGATTAGTCTGCAGCATGGGACTTTCGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTT
TTCTTGTGA
Protein sequenceShow/hide protein sequence
MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRAKARDAAEKQALELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTC
RFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIMNHGNPTSHEPELVLTNFITRIGLRVG
RLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKSKSNDIKGVKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRF
FL