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Lag0004061 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004061
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr6:793369..793782
RNA-Seq ExpressionLag0004061
SyntenyLag0004061
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030970589.1 uncharacterized protein LOC115990964 [Quercus lobata]9.6e-0429.09Show/hide
Query:  MNHKWEIKLLEATTILEGIKAISNTCIQNGLSLQVESYALSVIKALNGEDDDQSELKLIVDDILRATSRLPAVEFNHCNRLANTVAHWLVRKSSSLS---
        +N  ++ + +EA   L+ ++   N   QN +   +E  +L +IKAL  +D + S L L+V+D+  A S   ++ ++H  R  N+VAH L + + S+    
Subjt:  MNHKWEIKLLEATTILEGIKAISNTCIQNGLSLQVESYALSVIKALNGEDDDQSELKLIVDDILRATSRLPAVEFNHCNRLANTVAHWLVRKSSSLS---

Query:  --MEEDPTNL
          ME+ P+++
Subjt:  --MEEDPTNL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCACAAATGGGAGATCAAACTTTTGGAAGCTACAACCATCCTGGAAGGAATCAAGGCGATAAGCAATACCTGCATTCAAAATGGGTTGTCGCTGCAAGTTGAATC
GTACGCTTTGTCAGTTATCAAAGCCCTGAATGGTGAAGACGATGACCAATCGGAGTTGAAGTTGATCGTCGATGACATCCTCCGAGCGACCTCACGTCTTCCTGCTGTTG
AATTCAATCACTGTAATCGCCTTGCCAACACAGTAGCCCACTGGTTGGTAAGGAAATCGTCCTCCTTGTCGATGGAAGAAGATCCGACAAATCTCGGTTTAAGGGATAAT
GGGCATATTTTTTGGGCCCCTGAACTTCCAAATTGGTTTTCCCTCCTTTTTATGAGGGTAGTTGTATGGGTCGTTAGTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCACAAATGGGAGATCAAACTTTTGGAAGCTACAACCATCCTGGAAGGAATCAAGGCGATAAGCAATACCTGCATTCAAAATGGGTTGTCGCTGCAAGTTGAATC
GTACGCTTTGTCAGTTATCAAAGCCCTGAATGGTGAAGACGATGACCAATCGGAGTTGAAGTTGATCGTCGATGACATCCTCCGAGCGACCTCACGTCTTCCTGCTGTTG
AATTCAATCACTGTAATCGCCTTGCCAACACAGTAGCCCACTGGTTGGTAAGGAAATCGTCCTCCTTGTCGATGGAAGAAGATCCGACAAATCTCGGTTTAAGGGATAAT
GGGCATATTTTTTGGGCCCCTGAACTTCCAAATTGGTTTTCCCTCCTTTTTATGAGGGTAGTTGTATGGGTCGTTAGTCTTTAA
Protein sequenceShow/hide protein sequence
MNHKWEIKLLEATTILEGIKAISNTCIQNGLSLQVESYALSVIKALNGEDDDQSELKLIVDDILRATSRLPAVEFNHCNRLANTVAHWLVRKSSSLSMEEDPTNLGLRDN
GHIFWAPELPNWFSLLFMRVVVWVVSL