; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004068 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004068
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationchr6:842487..844374
RNA-Seq ExpressionLag0004068
SyntenyLag0004068
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599102.1 Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2693.06Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TE K ATEEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+NAEKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_004144232.1 protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus]8.6e-2895.83Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TELK A+EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_022153100.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Momordica charantia]2.8e-2690.28Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TELK  TEE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN EKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_022999790.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima]5.5e-2793.06Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TE+K ATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+N EKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_023546762.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo]4.2e-2794.44Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TELK ATEEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+NAEKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

TrEMBL top hitse value%identityAlignment
A0A0A0KIG9 Uncharacterized protein4.1e-2895.83Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TELK A+EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A1S3CMK4 protein DSS1 HOMOLOG ON CHROMOSOME V-like4.1e-2895.83Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TELK A+EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A6J1DJN7 protein DSS1 HOMOLOG ON CHROMOSOME V-like1.3e-2690.28Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TELK  TEE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN EKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A6J1KGK6 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like2.7e-2793.06Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TE+K ATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+N EKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A6J1KMT1 protein DSS1 HOMOLOG ON CHROMOSOME V-like2.3e-2691.67Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M TE K  TEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+NAE+K
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

SwissProt top hitse value%identityAlignment
P60896 26S proteasome complex subunit SEM17.3e-0650Show/hide
Query:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK
        + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE +  K
Subjt:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK

P60897 26S proteasome complex subunit SEM17.3e-0650Show/hide
Query:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK
        + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE +  K
Subjt:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK

Q3ZBR6 26S proteasome complex subunit SEM17.3e-0650Show/hide
Query:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK
        + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE +  K
Subjt:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK

Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V4.0e-2073.97Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M  E K A E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS QLK+ELEN +EKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)6.8e-2072.97Show/hide
Query:  MTTELKTATEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M  E K AT E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Subjt:  MTTELKTATEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)4.8e-2172.97Show/hide
Query:  MTTELKTATEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M  E K AT E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Subjt:  MTTELKTATEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)4.8e-2172.97Show/hide
Query:  MTTELKTATEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M  E K AT E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Subjt:  MTTELKTATEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)5.2e-1546.96Show/hide
Query:  MTTELKTATEE-VKVDLFEDDDEFEEFEINE-----------------------------------------EW-EVKEGKEITQQWEDDWDDDDVNDDF
        M  E K AT E VK+DLFEDDDEFEEFEINE                                         +W E +E KE++QQWEDDWDDDDVNDDF
Subjt:  MTTELKTATEE-VKVDLFEDDDEFEEFEINE-----------------------------------------EW-EVKEGKEITQQWEDDWDDDDVNDDF

Query:  SLQLKRELENNAEKK
        S QL++ELEN  +KK
Subjt:  SLQLKRELENNAEKK

AT5G45010.1 DSS1 homolog on chromosome V2.8e-2173.97Show/hide
Query:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        M  E K A E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS QLK+ELEN +EKK
Subjt:  MTTELKTATEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTGAACTGAAAACAGCTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGATGACGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGAAGG
TAAAGAAATTACTCAGCAGTGGGAAGATGACTGGGATGATGATGATGTCAATGACGACTTCTCATTGCAGCTTAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTGAACTGAAAACAGCTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGATGACGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGAAGG
TAAAGAAATTACTCAGCAGTGGGAAGATGACTGGGATGATGATGATGTCAATGACGACTTCTCATTGCAGCTTAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGA
Protein sequenceShow/hide protein sequence
MTTELKTATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK