CuGenDBv2

Gene ID	Lag0004134
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Ankyrin repeat-containing protein
Genome location	chr6:1353435..1353938
RNA-Seq Expression	Lag0004134
Synteny	Lag0004134
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	IPR026961 - PGG domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064720.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa]

5.9e-40

62.35

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Query:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD
        + I+FLVN    EL+G+FQSN+ +E+   T  +P A+   PT+   D +NS            S Q+ MRQREALMVVASVVATMAFQAAINPP G+WKD
Subjt:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD

Query:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        A KSTIHP RF  FV+SITFSFVFS IELFLL+SDYPSTIP FL FL  AKILSIGG+ VAY++AI CL+
Subjt:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

XP_004144272.1 ankyrin repeat-containing protein ITN1 [Cucumis sativus]

2.0e-43

64.71

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Query:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD
        +TI+FLVN    EL+ +FQSN+ +E+   TG +P A+   PT+               RK   S Q+ MRQREALMVVASVVATMAFQAAINPP G+WKD
Subjt:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD

Query:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        A KSTIHP RF  FV+SITFSFVFSIIELFLL+SDYPSTIP FLRFLW AKILSIGGM VAY++AI CL+
Subjt:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

XP_008445520.1 PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo]

9.8e-43

64.12

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Query:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD
        + I+FLVN    EL+G+FQSN+ +E+   T  +P A+   PT+   D +NS            S Q+ MRQREALMVVASVVATMAFQAAINPP G+WKD
Subjt:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD

Query:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        A KSTIHP RF  FV+SITFSFVFSIIELFLL+SDYPSTIP FL FLW AKILSIGGM VAY++AI CL+
Subjt:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

XP_022132068.1 ankyrin repeat-containing protein BDA1-like [Momordica charantia]

2.9e-34

56.59

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Query:  MQTIEFLVN---------------ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQ
        ++TI FLVN                LD + QSNR D +DLA   L  AVAAPP AG     +S  G+  CR G     R+MRQREALMVVASV+ATMAFQ
Subjt:  MQTIEFLVN---------------ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQ

Query:  AAINPPGGVWKDAGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        AA+NPPGG+W  AGKST H VRF CF+ SITF FVFSI+ELFLLI D+PS    FL FL FA   SI  M VA+ VAI C+T
Subjt:  AAINPPGGVWKDAGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

XP_038884534.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like [Benincasa hispida]

1.7e-42

63.53

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Query:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD
        +TI+FLVN    EL+ +FQSN+ +E+D     +  A+A  P    SD++NS            S Q++M QREALMVVASVVATMAFQAAINPP GVWKD
Subjt:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD

Query:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        A KSTIHP RF  FV+SITFSFVFSIIELFLLISDYPST+P  L FLW AKILSIGGM VAY +AI CL+
Subjt:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFJ7 ANK_REP_REGION domain-containing protein

9.6e-44

64.71

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Query:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD
        +TI+FLVN    EL+ +FQSN+ +E+   TG +P A+   PT+               RK   S Q+ MRQREALMVVASVVATMAFQAAINPP G+WKD
Subjt:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD

Query:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        A KSTIHP RF  FV+SITFSFVFSIIELFLL+SDYPSTIP FLRFLW AKILSIGGM VAY++AI CL+
Subjt:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

A0A1S3BCX6 ankyrin repeat-containing protein At3g12360-like

4.7e-43

64.12

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Query:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD
        + I+FLVN    EL+G+FQSN+ +E+   T  +P A+   PT+   D +NS            S Q+ MRQREALMVVASVVATMAFQAAINPP G+WKD
Subjt:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD

Query:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        A KSTIHP RF  FV+SITFSFVFSIIELFLL+SDYPSTIP FL FLW AKILSIGGM VAY++AI CL+
Subjt:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

A0A5A7VC22 Ankyrin repeat-containing protein

2.9e-40

62.35

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Query:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD
        + I+FLVN    EL+G+FQSN+ +E+   T  +P A+   PT+   D +NS            S Q+ MRQREALMVVASVVATMAFQAAINPP G+WKD
Subjt:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD

Query:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        A KSTIHP RF  FV+SITFSFVFS IELFLL+SDYPSTIP FL FL  AKILSIGG+ VAY++AI CL+
Subjt:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

A0A5D3BNW9 Ankyrin repeat-containing protein

4.7e-43

64.12

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Query:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD
        + I+FLVN    EL+G+FQSN+ +E+   T  +P A+   PT+   D +NS            S Q+ MRQREALMVVASVVATMAFQAAINPP G+WKD
Subjt:  QTIEFLVN----ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKD

Query:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        A KSTIHP RF  FV+SITFSFVFSIIELFLL+SDYPSTIP FL FLW AKILSIGGM VAY++AI CL+
Subjt:  AGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

A0A6J1BV84 ankyrin repeat-containing protein BDA1-like

1.4e-34

56.59

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Query:  MQTIEFLVN---------------ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQ
        ++TI FLVN                LD + QSNR D +DLA   L  AVAAPP AG     +S  G+  CR G     R+MRQREALMVVASV+ATMAFQ
Subjt:  MQTIEFLVN---------------ELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQ

Query:  AAINPPGGVWKDAGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT
        AA+NPPGG+W  AGKST H VRF CF+ SITF FVFSI+ELFLLI D+PS    FL FL FA   SI  M VA+ VAI C+T
Subjt:  AAINPPGGVWKDAGKSTIHPVRFGCFVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13950.1 unknown protein

9.6e-04

51.43

Show/hide

Query:  GQRMMRQREALMVVASVVATMAFQAAINPPGGVWK
        G  + + R  LMV A+V+A M+FQ  +NPPGGVW+
Subjt:  GQRMMRQREALMVVASVVATMAFQAAINPPGGVWK

AT5G51160.1 Ankyrin repeat family protein

1.5e-04

36.26

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Query:  REALMVVASVVATMAFQAAINPPGGVWKD----------------------AGKS---TIHPVRFGCFVASITFSFVFSIIELFLLISDYP
        R AL+VVAS+VAT  FQA++ PPGG W+D                      AG+S   T + V F  FV   T  F  S+  L +L   +P
Subjt:  REALMVVASVVATMAFQAAINPPGGVWKD----------------------AGKS---TIHPVRFGCFVASITFSFVFSIIELFLLISDYP

Sequences

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CDS sequence

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ATGCAGACAATAGAATTTCTGGTGAATGAACTAGACGGCGTGTTCCAAAGCAACAGATCAGACGAACACGACTTGGCCACAGGAGGGTTACCGGACGCCGTTGCAGCGCC
GCCGACCGCCGGCCGTTCGGACAACGAAAATAGCAGGGGCGGGCAGAGGCGGTGCAGAAAGGGGCATGGCAGCGGGCAGCGGATGATGAGACAGAGAGAGGCACTAATGG
TGGTGGCGTCGGTGGTGGCGACGATGGCTTTTCAGGCGGCGATCAACCCTCCCGGCGGCGTGTGGAAAGACGCCGGAAAATCGACGATCCACCCTGTTCGATTCGGCTGC
TTCGTTGCTTCGATCACTTTCAGTTTTGTGTTCTCGATTATTGAACTTTTTTTGCTGATTAGTGATTATCCCTCCACTATTCCCTTTTTCTTAAGATTTCTTTGGTTTGC
AAAGATCTTGTCCATTGGAGGCATGTTTGTAGCTTATGTGGTTGCAATTTCATGTTTGACTTAA

mRNA sequence

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Protein sequence

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MQTIEFLVNELDGVFQSNRSDEHDLATGGLPDAVAAPPTAGRSDNENSRGGQRRCRKGHGSGQRMMRQREALMVVASVVATMAFQAAINPPGGVWKDAGKSTIHPVRFGC
FVASITFSFVFSIIELFLLISDYPSTIPFFLRFLWFAKILSIGGMFVAYVVAISCLT

Lag0004134 (gene) of Sponge gourd (AG-4) v1 genome