; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004143 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004143
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr6:1403528..1404067
RNA-Seq ExpressionLag0004143
SyntenyLag0004143
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585753.1 hypothetical protein SDJN03_18486, partial [Cucurbita argyrosperma subsp. sororia]5.9e-6283.83Show/hide
Query:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH
        ++LFFILLI HLAGAA PS++  L+EVVPPVSLLCISECSTCPVICAPPPPPT  LKSPPPVPHSPP+A FPLN  P PSPPRPTPSPPPP  P  ASSH
Subjt:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH

Query:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV
         PPPPAFKYYFSLPPPPPVLIP P+PPTTAAPHGNTNAYNYYFYASNS SL+ P AFLWALFLFHLV
Subjt:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV

KAG7020664.1 hypothetical protein SDJN02_17350, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6183.23Show/hide
Query:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH
        ++LFFILLI HLAGAA PS++  L+EVVPPVSLLCISECSTCPVICAPPPPPT  LKSPPPVPHSPP+A FPLN  P PSPPRPTPSPPPP  P  ASSH
Subjt:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH

Query:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV
         PPPPA+KYYFSLPPPPPVLIP P+PPTTAAPHGNTNAYNYYFYASNS SL+ P AFLWALFLFHLV
Subjt:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV

XP_022132157.1 leucine-rich repeat extensin-like protein 3 [Momordica charantia]3.6e-5977.42Show/hide
Query:  MEPFTKTFHFSSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPS---
        ME F + FHFS L  ILLI  LAGAAA SED  L+EVVPPVSLLCISECSTCPVIC+PPPPPTAALKSPP  PHSPPLAY PLN+PPSPSPPRPTPS   
Subjt:  MEPFTKTFHFSSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPS---

Query:  --PPPPSPAVAS-SHPPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNT--NAYNYYFYASNSSSLSFPAAFLWALFLFHLVLS
          PPPPSP +A+ SHPPPPPAF YYF+LPPPPPVLIPVPVPP TAAPHGNT  NAYNYYFYAS SSSLS PA +L ALF+F  + S
Subjt:  --PPPPSPAVAS-SHPPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNT--NAYNYYFYASNSSSLSFPAAFLWALFLFHLVLS

XP_022951103.1 extensin-3-like [Cucurbita moschata]4.2e-6082.04Show/hide
Query:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH
        ++LFFILLI HLAGAA  S++  L+EVVPPVSLLCISECSTCPVICAPPPPPT  LKSPPPVPHSPP+A FPLN  P PSPPRP+PSPPPP  P  ASSH
Subjt:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH

Query:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV
         PPPPAFKYYFSLPPPPPVLIP P+PPTTAAPHGNTNAYNYYFYASNS SL+ P  FLWALFLFHLV
Subjt:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV

XP_023536686.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]1.1e-6083.23Show/hide
Query:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH
        ++LFFILLIF LAG A  S+D  L+EVVPPVSLLCISECSTCPVICAPPPPPT  LKSPPPVPHSPP+A FPLN  P PSPPRPTPSPPPP  PA  SSH
Subjt:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH

Query:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV
         PPPPAFKYYFSLPPPPPVLIP P+PPTTAAPHGNTNAYNYYFYASNS SL+ P AFLWALFLFHLV
Subjt:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV

TrEMBL top hitse value%identityAlignment
A0A0A0KD44 Uncharacterized protein1.3e-4969.27Show/hide
Query:  MEPFTKTFHFSSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICA--PPPPPTAALKSPPPVPHSPPLAYFPLNSPP-----SPSPPR
        ME F+KT HFSS+  ILLI  LA A    ED  ++EVVPPVSLLCISECSTCP ICA  PPPPP   LKSPPPVPH PPLAYFPLNSPP     SP PP 
Subjt:  MEPFTKTFHFSSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICA--PPPPPTAALKSPPPVPHSPPLAYFPLNSPP-----SPSPPR

Query:  PTPSPPPPSPAVASSHPPPPPAFKYYFSLPPPPPVLIPVPVPPT-TAAPHGNT--NAYNYYFYASNSSSL--SFPAAFLWALFLFHLVL-SW
        P+P PPP +    SSH PPPPAF+YYF+LPPPPPVLIPVPVPP+ TA PHGNT  NAYNYYFYA  SSS   S P A  W LFLFHL+L SW
Subjt:  PTPSPPPPSPAVASSHPPPPPAFKYYFSLPPPPPVLIPVPVPPT-TAAPHGNT--NAYNYYFYASNSSSL--SFPAAFLWALFLFHLVL-SW

A0A5A7VEH7 Classical arabinogalactan protein 9-like9.2e-5371.05Show/hide
Query:  MEPFTKTFHFSSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPP-----SPSPPRPT
        ME F+KT HFSS+  ILLI  LAGAA   ED  +++VVPPVSLLCISECSTCP ICAPPPPP   LKSPPPVPH PPLAYFPLNSPP     SP PP P+
Subjt:  MEPFTKTFHFSSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPP-----SPSPPRPT

Query:  PSPPPPSPAVASSHPPPPPAFKYYFSLPPPPPVLIPVPVPPT-TAAPHGNT--NAYNYYFYASNSSSL--SFPAAFLWALFLFHLVL-SW
        P PPP +    SSH PPPPAF+YYF+LPPPPPVLIPVPVPP+ TAAP GNT  NAYNYYFYA  SSS   S P AF W LFLFHL+L SW
Subjt:  PSPPPPSPAVASSHPPPPPAFKYYFSLPPPPPVLIPVPVPPT-TAAPHGNT--NAYNYYFYASNSSSL--SFPAAFLWALFLFHLVL-SW

A0A6J1BT26 leucine-rich repeat extensin-like protein 31.7e-5977.42Show/hide
Query:  MEPFTKTFHFSSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPS---
        ME F + FHFS L  ILLI  LAGAAA SED  L+EVVPPVSLLCISECSTCPVIC+PPPPPTAALKSPP  PHSPPLAY PLN+PPSPSPPRPTPS   
Subjt:  MEPFTKTFHFSSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPS---

Query:  --PPPPSPAVAS-SHPPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNT--NAYNYYFYASNSSSLSFPAAFLWALFLFHLVLS
          PPPPSP +A+ SHPPPPPAF YYF+LPPPPPVLIPVPVPP TAAPHGNT  NAYNYYFYAS SSSLS PA +L ALF+F  + S
Subjt:  --PPPPSPAVAS-SHPPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNT--NAYNYYFYASNSSSLSFPAAFLWALFLFHLVLS

A0A6J1GGS2 extensin-3-like2.1e-6082.04Show/hide
Query:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH
        ++LFFILLI HLAGAA  S++  L+EVVPPVSLLCISECSTCPVICAPPPPPT  LKSPPPVPHSPP+A FPLN  P PSPPRP+PSPPPP  P  ASSH
Subjt:  SSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSH

Query:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV
         PPPPAFKYYFSLPPPPPVLIP P+PPTTAAPHGNTNAYNYYFYASNS SL+ P  FLWALFLFHLV
Subjt:  PPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV

A0A6J1KKV8 leucine-rich repeat extensin-like protein 31.2e-5585.91Show/hide
Query:  SEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSHPPPPPAFKYYFSLPPPPP
        S+D  L+EVVPPVSLLCISECSTCPVICAPPPPPT  LKSPPPVPHSPP+A FPLN  P PSPPRPTPSPPPP  P VASSH PPPPAFKYYFSLPPPPP
Subjt:  SEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPS-PAVASSHPPPPPAFKYYFSLPPPPP

Query:  VLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV
        VLIP P+PPTTAAPHGNTNAYNYYFYASNS SL+ P AFLWALFLFHLV
Subjt:  VLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G13340.1 Leucine-rich repeat (LRR) family protein2.1e-0446.94Show/hide
Query:  STCPVICAPPPP-PTAALKSPPPVPHSPPLAYFPLNSPPSPSP-----PRPTPSPPPPSPAVASSHPPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAP
        ST P + +PPPP P   + SPPP P  PP  Y P   PP P P     P P P PPPP P V S  PP PP        PPPPPV  P P PP    P
Subjt:  STCPVICAPPPP-PTAALKSPPPVPHSPPLAYFPLNSPPSPSP-----PRPTPSPPPPSPAVASSHPPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAP

AT5G07740.1 actin binding2.1e-0446.24Show/hide
Query:  PPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRP----TPSPPPPSPAVASSHPPPPPAFKYYFSL---PPPPPVLIPVPVPPTTAAPHG
        PPPPP  +  SPPP P  PP       SPP P PP P     P PPPP P+  S  PPPPP F +  S+   PPPPP+    P PP     HG
Subjt:  PPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRP----TPSPPPPSPAVASSHPPPPPAFKYYFSL---PPPPPVLIPVPVPPTTAAPHG

AT5G11990.1 proline-rich family protein6.6e-1136.26Show/hide
Query:  LFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPP------PSPAVA
        +  I L+  +  A++PS+  +++      + LCISECSTCP IC+PPP   +   SPPP P        PL+S P P PP    SPPP      P P + 
Subjt:  LFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPP------PSPAVA

Query:  SSHPPPPPAFKYYFSLPPPPPVL-----IPVPVPPTTAAPHGNTNAYN--------YYFYASNSSSLSFPAAFLWALFLFHL
          H PPPP F Y+ S PPPPP+       P  VP +  +P G +            +YFY +++++L F ++FL AL +  L
Subjt:  SSHPPPPPAFKYYFSLPPPPPVL-----IPVPVPPTTAAPHGNTNAYN--------YYFYASNSSSLSFPAAFLWALFLFHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCTTTCACTAAAACCTTCCATTTCTCTTCCCTTTTCTTCATTCTTCTCATCTTCCACCTCGCCGGAGCTGCAGCGCCGTCGGAAGACCTCCATCTGATCGAGGT
GGTGCCTCCGGTAAGCCTTCTCTGTATCAGCGAATGTTCAACTTGCCCTGTCATATGCGCTCCGCCGCCGCCGCCCACGGCGGCGCTCAAGTCACCTCCGCCGGTACCCC
ACTCTCCGCCGCTGGCTTACTTCCCACTCAACTCACCCCCATCCCCATCCCCACCTCGACCAACCCCATCGCCCCCACCGCCATCGCCGGCGGTGGCTTCATCTCATCCT
CCACCGCCTCCCGCTTTCAAATATTACTTCAGCCTTCCACCACCGCCGCCGGTGCTGATTCCGGTGCCTGTGCCGCCGACGACGGCGGCTCCTCACGGAAATACCAATGC
TTATAATTACTACTTTTACGCTTCGAATTCCTCTTCTCTGTCTTTTCCGGCGGCGTTTTTGTGGGCTCTGTTTCTCTTCCATTTGGTGTTGTCTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCTTTCACTAAAACCTTCCATTTCTCTTCCCTTTTCTTCATTCTTCTCATCTTCCACCTCGCCGGAGCTGCAGCGCCGTCGGAAGACCTCCATCTGATCGAGGT
GGTGCCTCCGGTAAGCCTTCTCTGTATCAGCGAATGTTCAACTTGCCCTGTCATATGCGCTCCGCCGCCGCCGCCCACGGCGGCGCTCAAGTCACCTCCGCCGGTACCCC
ACTCTCCGCCGCTGGCTTACTTCCCACTCAACTCACCCCCATCCCCATCCCCACCTCGACCAACCCCATCGCCCCCACCGCCATCGCCGGCGGTGGCTTCATCTCATCCT
CCACCGCCTCCCGCTTTCAAATATTACTTCAGCCTTCCACCACCGCCGCCGGTGCTGATTCCGGTGCCTGTGCCGCCGACGACGGCGGCTCCTCACGGAAATACCAATGC
TTATAATTACTACTTTTACGCTTCGAATTCCTCTTCTCTGTCTTTTCCGGCGGCGTTTTTGTGGGCTCTGTTTCTCTTCCATTTGGTGTTGTCTTGGTGA
Protein sequenceShow/hide protein sequence
MEPFTKTFHFSSLFFILLIFHLAGAAAPSEDLHLIEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPLAYFPLNSPPSPSPPRPTPSPPPPSPAVASSHP
PPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASNSSSLSFPAAFLWALFLFHLVLSW