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Lag0004166 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004166
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHomeobox domain-containing protein
Genome locationchr6:1546651..1548359
RNA-Seq ExpressionLag0004166
SyntenyLag0004166
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060995.1 hypothetical protein E6C27_scaffold501G001300 [Cucumis melo var. makuwa]1.3e-1994.44Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK
        MVLRRPGRNRS++RENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKPATK
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK

KAF3975862.1 hypothetical protein CMV_000902 [Castanea mollissima]3.7e-1168.52Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK
        MVLRRPG NRS +RENPDILIMM A  QI+RG  +DKG+  E++GMGPLKP T+
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK

KAG6674396.1 hypothetical protein I3842_15G039000 [Carya illinoinensis]2.4e-1066.67Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK
        M LRRPG NRS +RENPDILI+MIA +QI+RG  +DKGD  +R+GMGPLK A +
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK

KAG7029268.1 hypothetical protein SDJN02_07606, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-1864.29Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATKRGKFSICNASQLENDLMNVLVDMASPNSVI
        MVLRR GRNRS++RENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKP TK     +C   Q+    +++L+   SP+ ++
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATKRGKFSICNASQLENDLMNVLVDMASPNSVI

KGN62652.2 hypothetical protein Csa_018750 [Cucumis sativus]7.5e-2092.73Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATKR
        MVLRRPGRNR+++RENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKPATKR
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATKR

TrEMBL top hitse value%identityAlignment
A0A0A0LN23 Uncharacterized protein3.6e-2092.73Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATKR
        MVLRRPGRNR+++RENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKPATKR
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATKR

A0A0R0JC99 Uncharacterized protein2.4e-0868.52Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK
        M LR P  NRS +RENPDIL MMIA  QIIRG E DK D  ERK MGP+KPAT+
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK

A0A5A7V591 Uncharacterized protein6.2e-2094.44Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK
        MVLRRPGRNRS++RENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKPATK
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATK

A0A6A4PQS0 Putative transcription factor Homeodomain-TALE-BEL family1.4e-0867.27Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTER-KGMGPLKPATK
        M LR    NRS +RENPDILIMMIA  QIIRG E+DK D  ER K MGP+KPAT+
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTER-KGMGPLKPATK

A0A6A5PA14 Homeobox domain-containing protein1.4e-0867.27Show/hide
Query:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTER-KGMGPLKPATK
        M LR    NRS +RENPDILIMMIA  QIIRG E+DK D  ER K MGP+KPAT+
Subjt:  MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTER-KGMGPLKPATK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTGAGAAGACCTGGCAGGAACAGAAGTTGGCACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTCCTGAGCAGGACAA
AGGAGATGGCACAGAGAGGAAGGGCATGGGCCCTCTAAAGCCTGCAACAAAGAGAGGGAAGTTTTCCATCTGCAATGCTTCACAGTTGGAGAATGACTTGATGAATGTTC
TGGTGGATATGGCAAGCCCAAATTCTGTCATTGTAGGTGAGATTCTGCCTCTTGGCATTCTGAACTCAGTTGCTATGTCCAATTCATTTGCTCTTAATAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTGAGAAGACCTGGCAGGAACAGAAGTTGGCACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTCCTGAGCAGGACAA
AGGAGATGGCACAGAGAGGAAGGGCATGGGCCCTCTAAAGCCTGCAACAAAGAGAGGGAAGTTTTCCATCTGCAATGCTTCACAGTTGGAGAATGACTTGATGAATGTTC
TGGTGGATATGGCAAGCCCAAATTCTGTCATTGTAGGTGAGATTCTGCCTCTTGGCATTCTGAACTCAGTTGCTATGTCCAATTCATTTGCTCTTAATAATTAG
Protein sequenceShow/hide protein sequence
MVLRRPGRNRSWHRENPDILIMMIAVDQIIRGPEQDKGDGTERKGMGPLKPATKRGKFSICNASQLENDLMNVLVDMASPNSVIVGEILPLGILNSVAMSNSFALNN