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Lag0004175 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004175
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionArabinogalactan peptide
Genome locationchr6:1611185..1611601
RNA-Seq ExpressionLag0004175
SyntenyLag0004175
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585732.1 CXXC motif containing zinc binding protein, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1059Show/hide
Query:  FSIHISNKR-----SSLSLSSFKSPFSRRNPNNPSSESMAAVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI
        +S  ISN+R     S LS+  F SP  ++     +   +      SLMALIALI AVASVAAQEAPAPSPASPA+SI PSFVSAC A FVAL  GSTLRI
Subjt:  FSIHISNKR-----SSLSLSSFKSPFSRRNPNNPSSESMAAVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI

KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0761.54Show/hide
Query:  SMAAVSKASLMALIALIFAVASVA---AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLR
        +MAAVSK S MAL+A++F V SVA   + E+PAP+PASPATS+ PS   AC+ AFVAL FGS L+
Subjt:  SMAAVSKASLMALIALIFAVASVA---AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLR

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1978.65Show/hide
Query:  SSLSL--SSFKSPFSRRN-PNNPSSESMAAVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI
        SSL+L  S   SP SRRN PN   SESMA VS+ASL+ALIA++FAVASVAA EAPAPSPASPATSI PSFVSAC+AAFVALAFGSTLRI
Subjt:  SSLSL--SSFKSPFSRRN-PNNPSSESMAAVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-0761.54Show/hide
Query:  SMAAVSKASLMALIALIFAVASVA---AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLR
        +MAAVSK S MAL+A++F V SVA   + E+PAP+PASPATS+ PS   AC+ AFVAL FGS L+
Subjt:  SMAAVSKASLMALIALIFAVASVA---AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLR

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]1.2e-1473.49Show/hide
Query:  LSSFKSPFSRRNPN-NPSSESMAAVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI
        LSS  SP S   P  +     MAA+SK SL+ALIALIFA++SVAAQEAPAPSPASPATSI PS VSACLAAF+ALAFGSTLRI
Subjt:  LSSFKSPFSRRNPN-NPSSESMAAVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein5.9e-1573.49Show/hide
Query:  LSSFKSPFSRRNPN-NPSSESMAAVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI
        LSS  SP S   P  +     MAA+SK SL+ALIALIFA++SVAAQEAPAPSPASPATSI PS VSACLAAF+ALAFGSTLRI
Subjt:  LSSFKSPFSRRNPN-NPSSESMAAVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI

A0A2P5DTQ4 Arabinogalactan peptide1.7e-0661.54Show/hide
Query:  AAVSKASLMALIALIFAVASVA----AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI
        A+ S ASL+ L+A+I  V SV     A EAPAPSPASPA++I+PSF+SACLAA VAL FGS +R+
Subjt:  AAVSKASLMALIALIFAVASVA----AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI

A0A2P5EL16 Arabinogalactan peptide2.9e-0662.9Show/hide
Query:  SKASLMALIALIFAVASVA----AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI
        S ASL+ L+A+I  V SV     A EAPAPSPASPA++I+PSF+SACLAA VAL FGS +R+
Subjt:  SKASLMALIALIFAVASVA----AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI

A0A5N5HNG8 Uncharacterized protein6.5e-0665.08Show/hide
Query:  AVSKA-SLMALIALIFAVASV--AAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI
        AVSKA S++AL+A++FAV S   AAQE+PAPSP SPA SI PSFVSA +A    LAFGS LR+
Subjt:  AVSKA-SLMALIALIFAVASV--AAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI

Q96504 CRG161.3e-0660.94Show/hide
Query:  MAAVSKASLMALIALIFAVASVA---AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLR
        MAAVSK S MAL+A++FAV SVA   + E+PAP PASPA S+ PS   AC+ AF+AL FGS L+
Subjt:  MAAVSKASLMALIALIFAVASVA---AQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLR

SwissProt top hitse value%identityAlignment
Q9LYF6 Arabinogalactan protein 154.8e-0655Show/hide
Query:  AVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI
        A+SKAS++ L+ +I +V + A  EAPAPSP S +++I+ SFVSA +AA  AL FGS LRI
Subjt:  AVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI

Arabidopsis top hitse value%identityAlignment
AT5G11740.1 arabinogalactan protein 153.4e-0755Show/hide
Query:  AVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI
        A+SKAS++ L+ +I +V + A  EAPAPSP S +++I+ SFVSA +AA  AL FGS LRI
Subjt:  AVSKASLMALIALIFAVASVAAQEAPAPSPASPATSITPSFVSACLAAFVALAFGSTLRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGACCACACCGAGAAATTAGCTGTTATTCAACCAATCGCCAGCTTGCCTGCCCCTGCCCGAACACCTGCCCGACTTTCTCTCGCTCCTCTTTCTCTCTCTCTCTA
TATATATCTCCTTCAACTATTTTCAATTCACATTTCCAACAAGAGGTCTTCTCTCAGTCTCTCATCTTTCAAATCCCCCTTCTCTCGCCGGAACCCTAACAATCCCTCAT
CTGAATCAATGGCCGCCGTCTCCAAAGCTTCTCTCATGGCTCTCATTGCCCTCATCTTCGCCGTCGCTTCCGTTGCCGCTCAGGAGGCTCCGGCTCCCAGCCCTGCCTCC
CCTGCTACCTCCATTACTCCGTCCTTCGTCTCCGCTTGCCTCGCCGCCTTCGTCGCTCTCGCCTTCGGATCTACTCTCAGGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGACCACACCGAGAAATTAGCTGTTATTCAACCAATCGCCAGCTTGCCTGCCCCTGCCCGAACACCTGCCCGACTTTCTCTCGCTCCTCTTTCTCTCTCTCTCTA
TATATATCTCCTTCAACTATTTTCAATTCACATTTCCAACAAGAGGTCTTCTCTCAGTCTCTCATCTTTCAAATCCCCCTTCTCTCGCCGGAACCCTAACAATCCCTCAT
CTGAATCAATGGCCGCCGTCTCCAAAGCTTCTCTCATGGCTCTCATTGCCCTCATCTTCGCCGTCGCTTCCGTTGCCGCTCAGGAGGCTCCGGCTCCCAGCCCTGCCTCC
CCTGCTACCTCCATTACTCCGTCCTTCGTCTCCGCTTGCCTCGCCGCCTTCGTCGCTCTCGCCTTCGGATCTACTCTCAGGATCTGA
Protein sequenceShow/hide protein sequence
MGDHTEKLAVIQPIASLPAPARTPARLSLAPLSLSLYIYLLQLFSIHISNKRSSLSLSSFKSPFSRRNPNNPSSESMAAVSKASLMALIALIFAVASVAAQEAPAPSPAS
PATSITPSFVSACLAAFVALAFGSTLRI