; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004182 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004182
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzinc finger CCCH domain-containing protein 20-like
Genome locationchr6:1667496..1668401
RNA-Seq ExpressionLag0004182
SyntenyLag0004182
Gene Ontology termsGO:0061157 - mRNA destabilization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598310.1 Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. sororia]1.2e-14481.7Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESMFLNPT HISSWDSLDD AA IPSYF A +VSPLDSPT+A+M++DSS WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKF YSG ECP+LRHG C KGDAC+YAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL ALM+NL  DELK NP ++GFG + RR+SG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGFRS
         AG R+
Subjt:  WAGFRS

KAG7029281.1 Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-14582.03Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESMFLNPT HISSWDSLDD AA IPSYF A +VSPLDSPT+A+M++DSS WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKF YSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL ALM+NL  DELK NP ++GFG + RR+SG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGFRS
         AG R+
Subjt:  WAGFRS

XP_022961630.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata]1.5e-14582.03Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESMFLNPT HISSWDSLDD AA IPSYF AD+VSPLDSPT+A+M++DS  WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL A+M+NL  DELK NP ++GFG + RR+SG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGFRS
         AG R+
Subjt:  WAGFRS

XP_022997351.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima]1.6e-14482.03Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESMFLNPT HISSWDSLDD AA IPSYF A +VSPLDSPT+A+M++DSSFWEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG  CRRRVCFFAH+SEQLRIP KQS+RSPR     A  VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP  TGGESFSRL ALM+NL  DELK NP ++GFG S RR+SG FD WDR NEEEPAMERVESGRNLRAQMYAKLMR+NSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGFRS
         AG R+
Subjt:  WAGFRS

XP_023545606.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo]1.6e-14482.03Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESMFLN T HISSWDSLDD AA IPSYF A +VSPLDSPT+A+M++DSS WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL ALM+NL  DELK NP ++GFG + RR+SG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGFRS
         AG R+
Subjt:  WAGFRS

TrEMBL top hitse value%identityAlignment
A0A1S3BBA7 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 201.4e-14181.19Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESM LNPTAHIS+WDSLDD +A I SYF+A HVSPLDSPT+ALM+FDSS WED DLPA VD FSCD FRMY+FKVR+CARGRSHDWTKCPYAH GEK
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRA-----ATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG CKKGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAHTSEQLRIP KQS+RSPRA       VSSPTSIL+
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRA-----ATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        SPSSDSPP+SPISP  +GGES SRL ALM++L+LDE K NP V+ F  +LRR+SG FDLWDR NEEEPAMERVESGRNLRAQMYAKLMRENSVDR  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAG
         AG
Subjt:  WAG

A0A5A7V5C0 Zinc finger CCCH domain-containing protein 204.3e-14381.85Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESM LNPTAHIS+WDSLDD +A I SYF+A HVSPLDSPT+ALM+FDSS WED DLPA VD FSCD FRMY+FKVR+CARGRSHDWTKCPYAH GEK
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRA-----ATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG CKKGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAHTSEQLRIP KQS+RSPRA       VSSPTSIL+
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRA-----ATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        SPSSDSPP+SPISP  +GGESFSRL ALM++L+LDELK NP V+ F  +LRR+SG FDLWDR NEEEPAMERVESGRNLRAQMYAKLMRENSVDR  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAG
         AG
Subjt:  WAG

A0A6J1GGI4 zinc finger CCCH domain-containing protein 20-like6.8e-14182.08Show/hide
Query:  MITESMFLNPTAHISSWDSLDD-SAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGE
        MITESM LNP+AH SSWDSLDD +AA I SY  A HVSPLDSPT A+MEFDSSFWE+Q+LPAAVDAF+CD FRMY+FKVR+CARGRSHDWTKCPYAH GE
Subjt:  MITESMFLNPTAHISSWDSLDD-SAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGE

Query:  KARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAA-----TVSSPTSIL
        KARRRDPRKFNYSG ECP LRHG CKKGDACE+AHG FEIWLHPDRYRTQPCRDGI CRRRVCFFAHT EQLRIPAKQSL SPRAA      V+SPTSIL
Subjt:  KARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAA-----TVSSPTSIL

Query:  ISPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPL
        ISP  DSPPMSPISP TTGGESFSRL  LM+NLQLD+ K NP+V+GF SS RR+SGGFDLWDR+ EEEPAMERVESGRNLRAQMYAKLMRENSVDR  PL
Subjt:  ISPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPL

Query:  IWAGFRS
        I AG +S
Subjt:  IWAGFRS

A0A6J1HCT8 zinc finger CCCH domain-containing protein 20-like7.0e-14682.03Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESMFLNPT HISSWDSLDD AA IPSYF AD+VSPLDSPT+A+M++DS  WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL A+M+NL  DELK NP ++GFG + RR+SG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGFRS
         AG R+
Subjt:  WAGFRS

A0A6J1K790 zinc finger CCCH domain-containing protein 20-like7.8e-14582.03Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESMFLNPT HISSWDSLDD AA IPSYF A +VSPLDSPT+A+M++DSSFWEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG  CRRRVCFFAH+SEQLRIP KQS+RSPR     A  VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP  TGGESFSRL ALM+NL  DELK NP ++GFG S RR+SG FD WDR NEEEPAMERVESGRNLRAQMYAKLMR+NSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGFRS
         AG R+
Subjt:  WAGFRS

SwissProt top hitse value%identityAlignment
O82199 Zinc finger CCCH domain-containing protein 202.2e-7246.36Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDL-------PAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKA
        NPT HI  W   +D       Y + D  S +    + L  +  S   D D         + +DA++CDHFRMY+FKVR CARGRSHDWT+CPYAH GEKA
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDL-------PAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKA

Query:  RRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPT-----SILIS
        RRRDPRKF+YSG  CP  R G CK+GDACE++HGVFE WLHP RYRTQPC+DG  CRRRVCFFAH+ +Q+R+   QS     +  V SPT        IS
Subjt:  RRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPT-----SILIS

Query:  PSSDSPPMSPISPATTGGESFSR---------LAALMYNLQLDELKP------NPSVAGFGSSLRRSSG-----------------GF-DLWDRSNEEEP
        PSS+SPP+SP   + +     SR         + A + NLQL+++K       N  + G+GS      G                 GF ++W+   EEEP
Subjt:  PSSDSPPMSPISPATTGGESFSR---------LAALMYNLQLDELKP------NPSVAGFGSSLRRSSG-----------------GF-DLWDRSNEEEP

Query:  AMERVESGRNLRAQMYAKLMRENSVDRSPP
        AMERVESGR LRAQ++ KL +EN + R  P
Subjt:  AMERVESGRNLRAQMYAKLMRENSVDRSPP

O82307 Zinc finger CCCH domain-containing protein 232.5e-6848.42Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT
        +PT HI  WD ++D  A I S F++ +++ ++    SP+  L  F S F          D D  +        D+FS D FR+Y+FK+R CARGRSHDWT
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV
        +CP+AH GEKARRRDPRKF+YSG  CP  R GSC++GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAHT+EQLR+    SL       +   
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV

Query:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMYNLQLDE-----LKPNPSVA--GFGSSLRRSSGGFDLWDRSN----EEEPAMERVESGR
        +SPTSIL+SPS    S+SPP+SP         S   L A M  +QL+        P  S     F SSLR        W R      EE PAME VESG+
Subjt:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMYNLQLDE-----LKPNPSVA--GFGSSLRRSSGGFDLWDRSN----EEEPAMERVESGR

Query:  NLRAQMYAKLMRENSV
         LRA+MYA+L RENS+
Subjt:  NLRAQMYAKLMRENSV

Q6L4N4 Zinc finger CCCH domain-containing protein 352.2e-5639.04Show/hide
Query:  HISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQD----LPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRK
        H++S  S  +   G  S   A     LD+    L   +++  ED++    + AAVDA++CD FRMY+FKVR CARGRSHDWT+CP+AH GEKARRRDPR+
Subjt:  HISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQD----LPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRK

Query:  FNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRI---PAKQSLRSPR----------------------
        + YSG  CP+ R G CK+GDACE+AHGVFE WLHP RYRTQPC+DG  CRRRVCFFAHT +QLR+     +Q   SPR                      
Subjt:  FNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRI---PAKQSLRSPR----------------------

Query:  ------------AATVSSPTSILI----SPSSDSPPMSPISP------ATTG-GESFSRLAALMYNLQLDELKPNPSVAGF-------GS----------
                    +   SSPTS L+    SP S+SPP+SP +       A  G G   + +   +  L+L   +  PS A F       GS          
Subjt:  ------------AATVSSPTSILI----SPSSDSPPMSPISP------ATTG-GESFSRLAALMYNLQLDELKPNPSVAGF-------GS----------

Query:  ---------------SLRRSSGGFDLWDRSN----EEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLIWAG
                       ++  +SG     +  +    EEE  MERVESGR LR +++ +L +E +V        AG
Subjt:  ---------------SLRRSSGGFDLWDRSN----EEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLIWAG

Q9FU27 Zinc finger CCCH domain-containing protein 22.2e-5944.7Show/hide
Query:  LPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCR
        + AAVDA++CD FRMY+FKVR CARGRSHDWT+CP+AH GEKARRRDPRK++YSG  CP+ R G CK+GDACEYAHGVFE WLHP RYRTQPC+DG  CR
Subjt:  LPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCR

Query:  RRVCFFAHTSEQLRI-PAKQSLRSPRAAT---------------------------VSSPTSILI----SPSSDSPPMSPISPATTG-------GESFSR
        RRVCFFAHT +QLR+ PA+QS  SPR+                              SSPTS L+    SP S+SPP+SP   A          G   + 
Subjt:  RRVCFFAHTSEQLRI-PAKQSLRSPRAAT---------------------------VSSPTSILI----SPSSDSPPMSPISPATTG-------GESFSR

Query:  LAALMYNLQLDELKPNP--------SVAGFGSSLRRSSGGFDL-------------------------WDRSNEEEPAMERVESGRNLRAQMYAKLMREN
        + A    L+L+++K +P        S A +GS  + ++G + L                              +EEP ++RVESGR LR +++ +L R+ 
Subjt:  LAALMYNLQLDELKPNP--------SVAGFGSSLRRSSGGFDL-------------------------WDRSNEEEPAMERVESGRNLRAQMYAKLMREN

Query:  SV
        ++
Subjt:  SV

Q9M0G2 Zinc finger CCCH domain-containing protein 496.3e-6746.41Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALM---------EFDSSFWEDQDLP-AAVDAFSCDHFRMYDFKVRTCARGRSHDWT
        MI E+    PT  I  W  L++       +F+    SP  S   AL          E D   + D   P + +DA+SCDHFRMYDFKVR CARGRSHDWT
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALM---------EFDSSFWEDQDLP-AAVDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSP
        +CPYAH GEKARRRDPRK++YSG  CP+ R G CKKGD+CE+AHGVFE WLHP RYRTQPC+DG  C R++CFFAH+ +QLR    +S     +  VSSP
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSP

Query:  T-----SILISPSSDSPPMSP-----ISPAT------TGGESFSRLAALMYNLQLDELKP---NPSVAGFGS--------------SLRRSSGGFDLWDR
               + ISP S SPPMSP      SP T       G  S + +     NLQ + +K    N  + GFGS              +     G  D+W+ 
Subjt:  T-----SILISPSSDSPPMSP-----ISPAT------TGGESFSRLAALMYNLQLDELKP---NPSVAGFGS--------------SLRRSSGGFDLWDR

Query:  SNEEEPAMER-VESGRNLRAQMYAKLMRENSVDR
          EEEP MER VESGR LR +M  KL +EN +DR
Subjt:  SNEEEPAMER-VESGRNLRAQMYAKLMRENSVDR

Arabidopsis top hitse value%identityAlignment
AT2G19810.1 CCCH-type zinc finger family protein1.6e-7346.36Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDL-------PAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKA
        NPT HI  W   +D       Y + D  S +    + L  +  S   D D         + +DA++CDHFRMY+FKVR CARGRSHDWT+CPYAH GEKA
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDL-------PAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKA

Query:  RRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPT-----SILIS
        RRRDPRKF+YSG  CP  R G CK+GDACE++HGVFE WLHP RYRTQPC+DG  CRRRVCFFAH+ +Q+R+   QS     +  V SPT        IS
Subjt:  RRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPT-----SILIS

Query:  PSSDSPPMSPISPATTGGESFSR---------LAALMYNLQLDELKP------NPSVAGFGSSLRRSSG-----------------GF-DLWDRSNEEEP
        PSS+SPP+SP   + +     SR         + A + NLQL+++K       N  + G+GS      G                 GF ++W+   EEEP
Subjt:  PSSDSPPMSPISPATTGGESFSR---------LAALMYNLQLDELKP------NPSVAGFGSSLRRSSG-----------------GF-DLWDRSNEEEP

Query:  AMERVESGRNLRAQMYAKLMRENSVDRSPP
        AMERVESGR LRAQ++ KL +EN + R  P
Subjt:  AMERVESGRNLRAQMYAKLMRENSVDRSPP

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.8e-6948.42Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT
        +PT HI  WD ++D  A I S F++ +++ ++    SP+  L  F S F          D D  +        D+FS D FR+Y+FK+R CARGRSHDWT
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV
        +CP+AH GEKARRRDPRKF+YSG  CP  R GSC++GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAHT+EQLR+    SL       +   
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV

Query:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMYNLQLDE-----LKPNPSVA--GFGSSLRRSSGGFDLWDRSN----EEEPAMERVESGR
        +SPTSIL+SPS    S+SPP+SP         S   L A M  +QL+        P  S     F SSLR        W R      EE PAME VESG+
Subjt:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMYNLQLDE-----LKPNPSVA--GFGSSLRRSSGGFDLWDRSN----EEEPAMERVESGR

Query:  NLRAQMYAKLMRENSV
         LRA+MYA+L RENS+
Subjt:  NLRAQMYAKLMRENSV

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein1.8e-6948.42Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT
        +PT HI  WD ++D  A I S F++ +++ ++    SP+  L  F S F          D D  +        D+FS D FR+Y+FK+R CARGRSHDWT
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHVSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV
        +CP+AH GEKARRRDPRKF+YSG  CP  R GSC++GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAHT+EQLR+    SL       +   
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV

Query:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMYNLQLDE-----LKPNPSVA--GFGSSLRRSSGGFDLWDRSN----EEEPAMERVESGR
        +SPTSIL+SPS    S+SPP+SP         S   L A M  +QL+        P  S     F SSLR        W R      EE PAME VESG+
Subjt:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMYNLQLDE-----LKPNPSVA--GFGSSLRRSSGGFDLWDRSN----EEEPAMERVESGR

Query:  NLRAQMYAKLMRENSV
         LRA+MYA+L RENS+
Subjt:  NLRAQMYAKLMRENSV

AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein4.5e-6846.41Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALM---------EFDSSFWEDQDLP-AAVDAFSCDHFRMYDFKVRTCARGRSHDWT
        MI E+    PT  I  W  L++       +F+    SP  S   AL          E D   + D   P + +DA+SCDHFRMYDFKVR CARGRSHDWT
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALM---------EFDSSFWEDQDLP-AAVDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSP
        +CPYAH GEKARRRDPRK++YSG  CP+ R G CKKGD+CE+AHGVFE WLHP RYRTQPC+DG  C R++CFFAH+ +QLR    +S     +  VSSP
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSP

Query:  T-----SILISPSSDSPPMSP-----ISPAT------TGGESFSRLAALMYNLQLDELKP---NPSVAGFGS--------------SLRRSSGGFDLWDR
               + ISP S SPPMSP      SP T       G  S + +     NLQ + +K    N  + GFGS              +     G  D+W+ 
Subjt:  T-----SILISPSSDSPPMSP-----ISPAT------TGGESFSRLAALMYNLQLDELKP---NPSVAGFGS--------------SLRRSSGGFDLWDR

Query:  SNEEEPAMER-VESGRNLRAQMYAKLMRENSVDR
          EEEP MER VESGR LR +M  KL +EN +DR
Subjt:  SNEEEPAMER-VESGRNLRAQMYAKLMRENSVDR

AT5G12850.1 CCCH-type zinc finger protein with ARM repeat domain4.6e-4940.13Show/hide
Query:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWE---DQDLPAAVDA-FSCDHFRMYDFKVRTCARGRSHDWTKCPYAH
        +I+E +  + ++  SS+ SL  S     S  + D VS    P    + F S   E   D  LP      +S D FRM+ FK+R C+R  SHDWT+CP+AH
Subjt:  MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWE---DQDLPAAVDA-FSCDHFRMYDFKVRTCARGRSHDWTKCPYAH

Query:  AGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLR--IPAKQS-LRSPRAAT-VSSPTS
         GE ARRRDPRKF+Y+ V CP+ + GSCK+GD CEYAHGVFE WLHP +YRT+ C+DG+GC RRVCFFAH +E+LR   P+  S L SPRA++ VS+ T 
Subjt:  AGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLR--IPAKQS-LRSPRAAT-VSSPTS

Query:  ILIS-----PSSDSPPM----SPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLM
         + S     P S S        PISP+  G    S +     N+      P  ++ G    L R     +  D  +E+   +   E  R L   M++   
Subjt:  ILIS-----PSSDSPPM----SPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLM

Query:  RENS
          +S
Subjt:  RENS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGAATCAATGTTCCTCAATCCAACGGCCCACATTTCATCCTGGGACTCCCTCGACGATTCCGCCGCCGGAATCCCCTCCTATTTCGCCGCCGACCACGTCTC
GCCGCTCGACTCGCCGACGTCGGCGCTCATGGAGTTCGACTCGTCGTTCTGGGAGGATCAGGATCTGCCGGCGGCGGTCGACGCCTTCTCGTGCGACCATTTCCGGATGT
ACGACTTTAAAGTTCGTACGTGCGCACGTGGGAGGTCGCACGATTGGACGAAATGTCCGTACGCTCACGCCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAAC
TACTCCGGCGTCGAGTGCCCGAATTTACGCCATGGGAGTTGTAAAAAAGGGGATGCCTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCGGACCGGTACCG
GACTCAGCCGTGCCGTGACGGAATCGGCTGCCGGCGGCGAGTCTGTTTCTTCGCCCATACTTCGGAGCAACTCCGGATTCCTGCAAAACAGAGCCTCCGGTCTCCACGGG
CGGCGACTGTATCATCGCCGACGTCGATCCTAATCTCGCCGTCGTCGGACTCCCCTCCGATGTCTCCGATCAGCCCTGCAACCACCGGCGGCGAATCGTTCAGCAGATTG
GCCGCATTGATGTACAATCTCCAGCTTGACGAATTAAAGCCGAATCCGTCAGTCGCCGGATTTGGTTCGAGTCTCCGGCGGAGCTCCGGCGGATTCGATCTATGGGACAG
AAGTAACGAAGAAGAACCAGCAATGGAGAGAGTGGAATCGGGAAGAAACCTCCGAGCCCAAATGTACGCCAAATTAATGCGAGAGAATTCAGTGGACAGATCGCCGCCGC
TGATATGGGCTGGATTTCGGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGAATCAATGTTCCTCAATCCAACGGCCCACATTTCATCCTGGGACTCCCTCGACGATTCCGCCGCCGGAATCCCCTCCTATTTCGCCGCCGACCACGTCTC
GCCGCTCGACTCGCCGACGTCGGCGCTCATGGAGTTCGACTCGTCGTTCTGGGAGGATCAGGATCTGCCGGCGGCGGTCGACGCCTTCTCGTGCGACCATTTCCGGATGT
ACGACTTTAAAGTTCGTACGTGCGCACGTGGGAGGTCGCACGATTGGACGAAATGTCCGTACGCTCACGCCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAAC
TACTCCGGCGTCGAGTGCCCGAATTTACGCCATGGGAGTTGTAAAAAAGGGGATGCCTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCGGACCGGTACCG
GACTCAGCCGTGCCGTGACGGAATCGGCTGCCGGCGGCGAGTCTGTTTCTTCGCCCATACTTCGGAGCAACTCCGGATTCCTGCAAAACAGAGCCTCCGGTCTCCACGGG
CGGCGACTGTATCATCGCCGACGTCGATCCTAATCTCGCCGTCGTCGGACTCCCCTCCGATGTCTCCGATCAGCCCTGCAACCACCGGCGGCGAATCGTTCAGCAGATTG
GCCGCATTGATGTACAATCTCCAGCTTGACGAATTAAAGCCGAATCCGTCAGTCGCCGGATTTGGTTCGAGTCTCCGGCGGAGCTCCGGCGGATTCGATCTATGGGACAG
AAGTAACGAAGAAGAACCAGCAATGGAGAGAGTGGAATCGGGAAGAAACCTCCGAGCCCAAATGTACGCCAAATTAATGCGAGAGAATTCAGTGGACAGATCGCCGCCGC
TGATATGGGCTGGATTTCGGAGCTAA
Protein sequenceShow/hide protein sequence
MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRKFN
YSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPTSILISPSSDSPPMSPISPATTGGESFSRL
AALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLIWAGFRS