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Lag0004260 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004260
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionKatanin p60 ATPase-containing subunit A1
Genome locationchr6:2370377..2372837
RNA-Seq ExpressionLag0004260
SyntenyLag0004260
Gene Ontology termsGO:0009058 - biosynthetic process (biological process)
GO:0051013 - microtubule severing (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008017 - microtubule binding (molecular function)
GO:0008568 - microtubule-severing ATPase activity (molecular function)
GO:0016853 - isomerase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575568.1 Katanin p60 ATPase-containing subunit A1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0778.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
TYK10591.1 katanin p60 ATPase-containing subunit A1 [Cucumis melo var. makuwa]1.1e-0778.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
XP_016902686.1 PREDICTED: katanin p60 ATPase-containing subunit A1 [Cucumis melo]1.1e-0778.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
XP_022954055.1 katanin p60 ATPase-containing subunit A1 [Cucurbita moschata]1.1e-0778.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
XP_038899644.1 katanin p60 ATPase-containing subunit A1 [Benincasa hispida]1.1e-0778.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
TrEMBL top hitse value%identityAlignment
A0A1S4E382 Katanin p60 ATPase-containing subunit A15.2e-0878.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
A0A5A7UVS8 Katanin p60 ATPase-containing subunit A15.2e-0878.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
A0A5D3CFM6 Katanin p60 ATPase-containing subunit A15.2e-0878.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
A0A6J1GRD7 Katanin p60 ATPase-containing subunit A15.2e-0878.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
A0A6J1JVL4 Katanin p60 ATPase-containing subunit A15.2e-0878.05Show/hide
Query:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
        +G     GFQDHLKLAREY L+GLY TSIIFFDGVIAQINK
Subjt:  IGEQYTGGFQDHLKLAREYTLKGLYATSIIFFDGVIAQINK
SwissProt top hitse value%identityAlignment
Q9SEX2 Katanin p60 ATPase-containing subunit A12.5e-0750Show/hide
Query:  GFQDHLKLAREYTLKGLYATSIIFFDGVIAQINKKQNPSTQQRPTTRGCEWRQRQTAAAALTKTRKRWQQKR
        G QDHLKLAREY L+G Y TS+IFFDG IAQINK  N  T   P  R  +W   + A    T+  K+   +R
Subjt:  GFQDHLKLAREYTLKGLYATSIIFFDGVIAQINKKQNPSTQQRPTTRGCEWRQRQTAAAALTKTRKRWQQKR
Arabidopsis top hitse value%identityAlignment
AT1G80350.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.8e-0850Show/hide
Query:  GFQDHLKLAREYTLKGLYATSIIFFDGVIAQINKKQNPSTQQRPTTRGCEWRQRQTAAAALTKTRKRWQQKR
        G QDHLKLAREY L+G Y TS+IFFDG IAQINK  N  T   P  R  +W   + A    T+  K+   +R
Subjt:  GFQDHLKLAREYTLKGLYATSIIFFDGVIAQINKKQNPSTQQRPTTRGCEWRQRQTAAAALTKTRKRWQQKR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACTGCGACAGCTCGAAAGCGGCAGCAGAACAGAAACGGGCGACGCCGAACGGGAAGGGCAATAGAGGAATAAGCTACAATAACGGGGTTTCGGCTGTCTGCCC
GTTTGCCCGAGTAGTGCAGTACAGGTTGGTTTCCGGGCAGCGACACCTCAAATGTCTCTGTCGGAAGAAGAGAGAGAGGAACTCTGAAGCTTTTTTTCTTCTACATTTAC
ATGAGTGGAAGGGTTTTCTGAGATTGAAAGATATTGGGGAGCAATACACTGGGGGATTTCAGGACCATCTGAAATTGGCGAGGGAATACACTCTTAAAGGATTGTATGCC
ACTTCAATCATCTTCTTTGACGGTGTTATAGCTCAAATTAACAAGAAACAAAACCCATCCACCCAGCAGCGACCGACGACAAGAGGCTGCGAGTGGCGGCAACGGCAAAC
GGCAGCGGCAGCGTTGACAAAGACAAGGAAGAGATGGCAGCAAAAGAGGGAGAAAGATGAAGGGTTTCGGGGAGAGAAAGGAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACTGCGACAGCTCGAAAGCGGCAGCAGAACAGAAACGGGCGACGCCGAACGGGAAGGGCAATAGAGGAATAAGCTACAATAACGGGGTTTCGGCTGTCTGCCC
GTTTGCCCGAGTAGTGCAGTACAGGTTGGTTTCCGGGCAGCGACACCTCAAATGTCTCTGTCGGAAGAAGAGAGAGAGGAACTCTGAAGCTTTTTTTCTTCTACATTTAC
ATGAGTGGAAGGGTTTTCTGAGATTGAAAGATATTGGGGAGCAATACACTGGGGGATTTCAGGACCATCTGAAATTGGCGAGGGAATACACTCTTAAAGGATTGTATGCC
ACTTCAATCATCTTCTTTGACGGTGTTATAGCTCAAATTAACAAGAAACAAAACCCATCCACCCAGCAGCGACCGACGACAAGAGGCTGCGAGTGGCGGCAACGGCAAAC
GGCAGCGGCAGCGTTGACAAAGACAAGGAAGAGATGGCAGCAAAAGAGGGAGAAAGATGAAGGGTTTCGGGGAGAGAAAGGAGTGTAG
Protein sequenceShow/hide protein sequence
MANCDSSKAAAEQKRATPNGKGNRGISYNNGVSAVCPFARVVQYRLVSGQRHLKCLCRKKRERNSEAFFLLHLHEWKGFLRLKDIGEQYTGGFQDHLKLAREYTLKGLYA
TSIIFFDGVIAQINKKQNPSTQQRPTTRGCEWRQRQTAAAALTKTRKRWQQKREKDEGFRGEKGV