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Lag0004273 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004273
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlutamate receptor
Genome locationchr6:2502200..2502520
RNA-Seq ExpressionLag0004273
SyntenyLag0004273
Gene Ontology termsGO:0006811 - ion transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598370.1 Glutamate receptor 2.7, partial [Cucurbita argyrosperma subsp. sororia]6.1e-2267.39Show/hide
Query:  FFYFFVGFLLLYGSPSEAETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATAT
        +F+  VGFL+L G  S  +T E  LRCS D PK  VKMGVIADNSSRVGREQIVAI MAF++  +  FSNSCHKVE LL DSP NSAQA AT
Subjt:  FFYFFVGFLLLYGSPSEAETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATAT
XP_022961652.1 glutamate receptor 2.7-like isoform X1 [Cucurbita moschata]1.4e-2367Show/hide
Query:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
        MFR  CFF   VGF+LL GS +EA   ET E  LRC +++PK  V+MGVIADNSSRVGREQIVAIQMA +   HY F NSCH VELLLV SP+NSA ATA
Subjt:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
XP_022961653.1 glutamate receptor 2.7-like isoform X2 [Cucurbita moschata]1.4e-2367Show/hide
Query:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
        MFR  CFF   VGF+LL GS +EA   ET E  LRC +++PK  V+MGVIADNSSRVGREQIVAIQMA +   HY F NSCH VELLLV SP+NSA ATA
Subjt:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
XP_022961654.1 glutamate receptor 2.6-like isoform X3 [Cucurbita moschata]1.4e-2367Show/hide
Query:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
        MFR  CFF   VGF+LL GS +EA   ET E  LRC +++PK  V+MGVIADNSSRVGREQIVAIQMA +   HY F NSCH VELLLV SP+NSA ATA
Subjt:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
XP_022997326.1 LOW QUALITY PROTEIN: glutamate receptor 2.7-like [Cucurbita maxima]8.4e-2469.57Show/hide
Query:  FFYFFVGFLLLYGSPSEAETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATAT
        +F+  VGFL+L G  S  +T E  LRCS D PK  VKMGVIADNSSRVGREQIVAI MAF++  + HFSNSCHKVELLL DSP+NSAQA AT
Subjt:  FFYFFVGFLLLYGSPSEAETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATAT
TrEMBL top hitse value%identityAlignment
A0A6J1HAR4 glutamate receptor 2.7-like isoform X17.0e-2467Show/hide
Query:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
        MFR  CFF   VGF+LL GS +EA   ET E  LRC +++PK  V+MGVIADNSSRVGREQIVAIQMA +   HY F NSCH VELLLV SP+NSA ATA
Subjt:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
A0A6J1HCF1 glutamate receptor 2.7-like isoform X27.0e-2467Show/hide
Query:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
        MFR  CFF   VGF+LL GS +EA   ET E  LRC +++PK  V+MGVIADNSSRVGREQIVAIQMA +   HY F NSCH VELLLV SP+NSA ATA
Subjt:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
A0A6J1HCW7 Glutamate receptor5.0e-2266.3Show/hide
Query:  FFYFFVGFLLLYGSPSEAETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATAT
        +F+  VGFL+L G  S  +T E  LRCS D PK  VKMGVIADNSSRVGREQIVAI MAF++  +  FSNSCHKVE LL DSP+NS QA AT
Subjt:  FFYFFVGFLLLYGSPSEAETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATAT
A0A6J1HEN7 glutamate receptor 2.6-like isoform X37.0e-2467Show/hide
Query:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
        MFR  CFF   VGF+LL GS +EA   ET E  LRC +++PK  V+MGVIADNSSRVGREQIVAIQMA +   HY F NSCH VELLLV SP+NSA ATA
Subjt:  MFRDFCFFYFFVGFLLLYGSPSEA---ETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATA
A0A6J1K770 LOW QUALITY PROTEIN: glutamate receptor 2.7-like4.1e-2469.57Show/hide
Query:  FFYFFVGFLLLYGSPSEAETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATAT
        +F+  VGFL+L G  S  +T E  LRCS D PK  VKMGVIADNSSRVGREQIVAI MAF++  + HFSNSCHKVELLL DSP+NSAQA AT
Subjt:  FFYFFVGFLLLYGSPSEAETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATAT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATGTTTAGAGATTTTTGCTTCTTCTATTTCTTCGTTGGGTTTCTCCTGCTGTACGGCTCACCATCAGAAGCTGAGACCAAGGAAATCCAGTTGAGATGTTCCGC
CGACGACCCAAAAGGAGTGGTGAAGATGGGAGTTATTGCTGATAATAGCTCAAGGGTGGGGAGGGAACAGATCGTGGCCATTCAAATGGCTTTCAGACGACATTATCATT
ATCATTTTTCTAATTCATGCCACAAGGTGGAGCTCCTCCTCGTCGATTCGCCGGAGAACTCCGCTCAGGCAACCGCTACTGGTAAGATCGACCATCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATATGTTTAGAGATTTTTGCTTCTTCTATTTCTTCGTTGGGTTTCTCCTGCTGTACGGCTCACCATCAGAAGCTGAGACCAAGGAAATCCAGTTGAGATGTTCCGC
CGACGACCCAAAAGGAGTGGTGAAGATGGGAGTTATTGCTGATAATAGCTCAAGGGTGGGGAGGGAACAGATCGTGGCCATTCAAATGGCTTTCAGACGACATTATCATT
ATCATTTTTCTAATTCATGCCACAAGGTGGAGCTCCTCCTCGTCGATTCGCCGGAGAACTCCGCTCAGGCAACCGCTACTGGTAAGATCGACCATCTCTAG
Protein sequenceShow/hide protein sequence
MNMFRDFCFFYFFVGFLLLYGSPSEAETKEIQLRCSADDPKGVVKMGVIADNSSRVGREQIVAIQMAFRRHYHYHFSNSCHKVELLLVDSPENSAQATATGKIDHL