; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004281 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004281
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranspos_assoc domain-containing protein
Genome locationchr6:2546902..2547375
RNA-Seq ExpressionLag0004281
SyntenyLag0004281
Gene Ontology termsNA
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1833012.1 unnamed protein product [Ananas comosus var. bracteatus]1.4e-2747.1Show/hide
Query:  TSNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNW--TDKGESNKHGNNEEPNEEA
        + + I CPCK+CNN + K R++VE DL++ G+V  YT+W +HG+E  + E+  +   SD E V +ILE HFG  N + W   D G S    ++EEPNE A
Subjt:  TSNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNW--TDKGESNKHGNNEEPNEEA

Query:  SKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGN
        +KF++LL D  +++YPGC R+SKLS ++KLFH+KCL +
Subjt:  SKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGN

RWR75197.1 hypothetical protein CKAN_00357000 [Cinnamomum micranthum f. kanehirae]6.4e-2850.35Show/hide
Query:  HATS-NQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDE-EDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPNE
        HAT+ ++I CPC +C N   KTR+DV  DLL  GI+  Y  WT HGE+   YE E   + S+E +D+ E+L+D FG+ N D   +  ES++    +EPN 
Subjt:  HATS-NQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDE-EDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPNE

Query:  EASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW
        EA KFY+LL DAE E+YPGC ++SKLSF+++LFHLKCL  W
Subjt:  EASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW

RWR98116.1 hypothetical protein CKAN_02761400 [Cinnamomum micranthum f. kanehirae]1.6e-2649.65Show/hide
Query:  HATS-NQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDE-EDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPNE
        HAT+ ++I CPC +C N   K R+DV  DLL  GI+  Y  WT HGE+   YE E   + S+E +D+ E+L+D FG+ N D   +  ES++    +EPN 
Subjt:  HATS-NQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDE-EDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPNE

Query:  EASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW
        EA KFY+LL DAE E+YPGC ++SKLSF+++LFHLKCL  W
Subjt:  EASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW

XP_020094140.1 uncharacterized protein LOC109714114 [Ananas comosus]2.6e-2949.28Show/hide
Query:  TSNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNW--TDKGESNKHGNNEEPNEEA
        + + I CPCK+CNN + K R++VEADL++ G+V  YT+W +HGEE  + E+  +   SD E V +ILE HFG  N + W   D G S    ++EEPNE A
Subjt:  TSNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNW--TDKGESNKHGNNEEPNEEA

Query:  SKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGN
        +KF++LL D  +++YPGC R+SKLSF++KLFH+KCL +
Subjt:  SKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGN

XP_038882387.1 uncharacterized protein LOC120073655 [Benincasa hispida]1.1e-4373.11Show/hide
Query:  MHATSNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPNEE
        MHAT+ QISCPCKRCNN VLKTRD+VE DLLMFGIVPSY +WTMHGEE+ +YE  +N N +D+EDVFEILEDHFG  +TDNW  K ESNKHG +EEPNE 
Subjt:  MHATSNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPNEE

Query:  ASKFYRLLNDAEKEVYPGC
        AS+FY +LN AEKE+Y GC
Subjt:  ASKFYRLLNDAEKEVYPGC

TrEMBL top hitse value%identityAlignment
A0A2N9G660 Transpos_assoc domain-containing protein2.7e-3252.82Show/hide
Query:  NQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEE-------NLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPN
        ++I CPCKRCN+   K+RDDVEADL+  GIVP+YT+W  HGEE       NL  + E NGN     D+ E++ED+FG  N  +W   GE + +G  EEPN
Subjt:  NQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEE-------NLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPN

Query:  EEASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW
        ++A+KF+RLL D E+++YP CK Y+KLSFI+KL H+KCLG W
Subjt:  EEASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW

A0A2N9GUI6 Uncharacterized protein4.6e-3252.11Show/hide
Query:  HAT-SNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQ--NGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPN
        H T  ++I CPCKRCN+   K+RDDVEADL+  GIVP+YT+W  HGEE  S   +   + + SD  D+ E++ED+FG  N  +W   GE + +G  EEPN
Subjt:  HAT-SNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQ--NGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPN

Query:  EEASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW
        ++A+KF+RLL D E+++YP CK Y+KLSFI+KL H+KCLG W
Subjt:  EEASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW

A0A2N9HCP8 Uncharacterized protein2.3e-3151.41Show/hide
Query:  HAT-SNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQ--NGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPN
        H T  ++I CPCKRCN+   K+RDDVEADL+   IVP+YT+W  HGEE  S   +   + + SD  D+ E++ED+FG  N  +W   GE + +G  EEPN
Subjt:  HAT-SNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQ--NGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPN

Query:  EEASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW
        ++A+KF+RLL D E+++YP CK Y+KLSFI+KL H+KCLG W
Subjt:  EEASKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW

A0A2N9I4P1 Uncharacterized protein2.5e-3051.09Show/hide
Query:  NQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQ--NGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPNEEASK
        ++I CPCKRCN+   K+RDDVEADL+  GIVP+YT+W  HGEE  S   +   + + SD  D+ E++ED+FG  N  +W   GE + +G  EEPN +A+K
Subjt:  NQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQ--NGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPNEEASK

Query:  FYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW
        F+ LL D E+++YP CK Y +LSFI+KL H+KCLG W
Subjt:  FYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGNW

A0A6P5FLY7 uncharacterized protein LOC1097141141.3e-2949.28Show/hide
Query:  TSNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNW--TDKGESNKHGNNEEPNEEA
        + + I CPCK+CNN + K R++VEADL++ G+V  YT+W +HGEE  + E+  +   SD E V +ILE HFG  N + W   D G S    ++EEPNE A
Subjt:  TSNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNW--TDKGESNKHGNNEEPNEEA

Query:  SKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGN
        +KF++LL D  +++YPGC R+SKLSF++KLFH+KCL +
Subjt:  SKFYRLLNDAEKEVYPGCKRYSKLSFIMKLFHLKCLGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGCAACATCCAATCAAATTTCTTGTCCATGTAAGAGATGCAATAATGCAGTACTTAAAACTCGAGATGATGTTGAAGCAGATCTGTTAATGTTTGGGATAGTTCC
AAGTTACACTCAATGGACAATGCATGGTGAAGAAAATTTGTCATATGAAGCAGAACAAAATGGTAATGGATCCGATGAAGAAGATGTTTTTGAAATATTAGAGGATCATT
TTGGTGTTTTTAACACTGACAACTGGACCGATAAAGGAGAATCAAACAAGCATGGTAATAATGAAGAACCTAATGAAGAAGCTTCTAAGTTTTATAGATTGTTGAATGAT
GCAGAAAAGGAGGTTTATCCTGGGTGTAAGAGATATTCTAAGTTGTCTTTCATTATGAAGTTGTTTCATCTCAAGTGTCTTGGCAATTGGATTGGAGTAATAAGTCGTTT
ACTTTATCCTGCTAAACAATTTGCTAATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATGCAACATCCAATCAAATTTCTTGTCCATGTAAGAGATGCAATAATGCAGTACTTAAAACTCGAGATGATGTTGAAGCAGATCTGTTAATGTTTGGGATAGTTCC
AAGTTACACTCAATGGACAATGCATGGTGAAGAAAATTTGTCATATGAAGCAGAACAAAATGGTAATGGATCCGATGAAGAAGATGTTTTTGAAATATTAGAGGATCATT
TTGGTGTTTTTAACACTGACAACTGGACCGATAAAGGAGAATCAAACAAGCATGGTAATAATGAAGAACCTAATGAAGAAGCTTCTAAGTTTTATAGATTGTTGAATGAT
GCAGAAAAGGAGGTTTATCCTGGGTGTAAGAGATATTCTAAGTTGTCTTTCATTATGAAGTTGTTTCATCTCAAGTGTCTTGGCAATTGGATTGGAGTAATAAGTCGTTT
ACTTTATCCTGCTAAACAATTTGCTAATAATTGA
Protein sequenceShow/hide protein sequence
MHATSNQISCPCKRCNNAVLKTRDDVEADLLMFGIVPSYTQWTMHGEENLSYEAEQNGNGSDEEDVFEILEDHFGVFNTDNWTDKGESNKHGNNEEPNEEASKFYRLLND
AEKEVYPGCKRYSKLSFIMKLFHLKCLGNWIGVISRLLYPAKQFANN