; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004288 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004288
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr6:2619212..2620569
RNA-Seq ExpressionLag0004288
SyntenyLag0004288
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150882.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis sativus]1.9e-11782.42Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNP-------KPSRRS-ITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK
        MAVS SAATA          PSSSS        YTP FNP        PSRR+ + A AQS+ RQTWLPGLDPP HLDG+LAGDFGFDPLGL EDP SLK
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNP-------KPSRRS-ITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK

Query:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG
        WYVQAELVH RFAMLGVSG+LLTDLLRVTGIS LPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+A +GLEPGYPG
Subjt:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG

Query:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        GPLLNPLG+AKDIK AHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_022144175.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic isoform X1 [Momordica charantia]1.9e-11780.58Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKP---------SRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL
        MAVS S + AT  A    P  SS S S+IS  F++PSF P+          SRR+I A+AQ+QPR+TWLPGLDPP HLDGSLAGDFGFDPLGLAEDP+SL
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKP---------SRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL

Query:  KWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPGSQAQEGTFFGLESALRGLE
        KWYVQAEL+HSRFAMLG+SGILLTDLLRVTG+S +PVWY AGA EYGFANKETLFIVQLLLMG    FVETKRYMDFKSPGSQAQEGTFFGLE+AL GLE
Subjt:  KWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPGSQAQEGTFFGLESALRGLE

Query:  PGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        PGYPGGPLLNPLGLAKDIK AHDWKLKEIKNGRLAMVAM+GIFVQAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  PGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_022144176.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic isoform X2 [Momordica charantia]3.5e-11981.75Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKP---------SRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL
        MAVS S + AT  A    P  SS S S+IS  F++PSF P+          SRR+I A+AQ+QPR+TWLPGLDPP HLDGSLAGDFGFDPLGLAEDP+SL
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKP---------SRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL

Query:  KWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYP
        KWYVQAEL+HSRFAMLG+SGILLTDLLRVTG+S +PVWY AGA EYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AL GLEPGYP
Subjt:  KWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYP

Query:  GGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        GGPLLNPLGLAKDIK AHDWKLKEIKNGRLAMVAM+GIFVQAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  GGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_022951251.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita moschata]4.3e-11783.33Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPK------PSRRSITAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK
        MAVSLSAAT      +F   PSSS        FY+ S +PK      PSRR++TAQA  QSQPRQTWLPGLDPP HLDG+LAGDFGFDPLGL EDP SLK
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPK------PSRRSITAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK

Query:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG
        W+VQAELVHSRFAMLGVSGILLTDLLRVTGIS LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESA  GLEPGYPG
Subjt:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG

Query:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        GPLLNPLGLAKDIK AHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

XP_038886221.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Benincasa hispida]2.9e-12186.3Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNP-------KPSRRS-ITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK
        MAVS+SAATA AT  AF  QPSSSSSS      YTPSFNP        PSRR+ + AQAQS+ RQTWLPGLDPP HLDG+LAGDFGFDPLGL EDP SLK
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNP-------KPSRRS-ITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK

Query:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG
        WYVQAELVHSRFAMLGVSGILLTDLLRVTGIS LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+A  GLEPGYPG
Subjt:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG

Query:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        GPLLNPLG+AKDIK AH+WKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
Subjt:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRB4 Chlorophyll a-b binding protein, chloroplastic9.3e-11882.42Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNP-------KPSRRS-ITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK
        MAVS SAATA          PSSSS        YTP FNP        PSRR+ + A AQS+ RQTWLPGLDPP HLDG+LAGDFGFDPLGL EDP SLK
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNP-------KPSRRS-ITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK

Query:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG
        WYVQAELVH RFAMLGVSG+LLTDLLRVTGIS LPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+A +GLEPGYPG
Subjt:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG

Query:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        GPLLNPLG+AKDIK AHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A6J1CQX2 Chlorophyll a-b binding protein, chloroplastic9.3e-11880.58Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKP---------SRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL
        MAVS S + AT  A    P  SS S S+IS  F++PSF P+          SRR+I A+AQ+QPR+TWLPGLDPP HLDGSLAGDFGFDPLGLAEDP+SL
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKP---------SRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL

Query:  KWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPGSQAQEGTFFGLESALRGLE
        KWYVQAEL+HSRFAMLG+SGILLTDLLRVTG+S +PVWY AGA EYGFANKETLFIVQLLLMG    FVETKRYMDFKSPGSQAQEGTFFGLE+AL GLE
Subjt:  KWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPGSQAQEGTFFGLESALRGLE

Query:  PGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        PGYPGGPLLNPLGLAKDIK AHDWKLKEIKNGRLAMVAM+GIFVQAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  PGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A6J1CSJ3 Chlorophyll a-b binding protein, chloroplastic1.7e-11981.75Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKP---------SRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL
        MAVS S + AT  A    P  SS S S+IS  F++PSF P+          SRR+I A+AQ+QPR+TWLPGLDPP HLDGSLAGDFGFDPLGLAEDP+SL
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKP---------SRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL

Query:  KWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYP
        KWYVQAEL+HSRFAMLG+SGILLTDLLRVTG+S +PVWY AGA EYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AL GLEPGYP
Subjt:  KWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYP

Query:  GGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        GGPLLNPLGLAKDIK AHDWKLKEIKNGRLAMVAM+GIFVQAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  GGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A6J1GH16 Chlorophyll a-b binding protein, chloroplastic2.1e-11783.33Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPK------PSRRSITAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK
        MAVSLSAAT      +F   PSSS        FY+ S +PK      PSRR++TAQA  QSQPRQTWLPGLDPP HLDG+LAGDFGFDPLGL EDP SLK
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPK------PSRRSITAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLK

Query:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG
        W+VQAELVHSRFAMLGVSGILLTDLLRVTGIS LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESA  GLEPGYPG
Subjt:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG

Query:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        GPLLNPLGLAKDIK AHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  GPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

A0A6J1KNS0 Chlorophyll a-b binding protein, chloroplastic1.3e-11684.64Show/hide
Query:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAE
        MAVSLSAAT        LP  S  SSS  S      S    PSRR++TAQA  QSQPRQTWLPGLDPP HLDG+LAGDFGFDPLGL EDP SLKW+VQAE
Subjt:  MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAE

Query:  LVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNP
        LVHSRFAMLGVSGILLTDLLRVTGIS LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESA  GLEPGYPGGPLLNP
Subjt:  LVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNP

Query:  LGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        LGLAKDIK AH+WKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH TII TLSSSSP
Subjt:  LGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic3.0e-4944.61Show/hide
Query:  SAATATATARAFLPQPSSSSSSSI----SAPFY------TPSFNPKPSRRSIT--AQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKW
        SA  ++  A      PSS  + SI     A F          ++  P+ RS T    A    R  W PG  PP  LDGSL GDFGFDPLGLA DP+SL+W
Subjt:  SAATATATARAFLPQPSSSSSSSI----SAPFY------TPSFNPKPSRRSIT--AQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKW

Query:  YVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGG
          QAELVH R+AMLG +GI + +LL   GI N P WY AG  EY F +  TLFIV+L+L+G+ E +R+ D   PG    +  F    + L G + GYPGG
Subjt:  YVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGG

Query:  PLLNPLGLAKDIKI-AHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS
           +PLG          + + KEIKNGRLAM+A++G + Q   T TGPIDNL  HL++P H TI    S
Subjt:  PLLNPLGLAKDIKI-AHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS

P27521 Chlorophyll a-b binding protein 4, chloroplastic1.3e-5245.42Show/hide
Query:  LSAATATATARAFLPQPS-----SSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAEL
        ++  T  A+A  F P  S     + SS  ++      S        S   +A+   +  WLPGL  P +L GSLAGD GFDPLGLAEDP++LKW+VQAEL
Subjt:  LSAATATATARAFLPQPS-----SSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAEL

Query:  VHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPL
        V+ R+AMLGV+G+LL ++    GI N+P WY+AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F   + +L   E GYPGG + NPL
Subjt:  VHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPL

Query:  GLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS
          A       + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+QT +
Subjt:  GLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic8.4e-10081.9Show/hide
Query:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGF
        R TWLPGL+PP +LDG+LAGD+GFDPLGL EDP+SLKWYVQAELVHSRFAMLGV+GIL TDLLR TGI NLPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLE+AL GLEPGYPGGPLLNPLGLAKD++ AHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic1.1e-5452.68Show/hide
Query:  WLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVET
        WLPGL  P +L GSL GD GFDPLGLAEDP++L+W+VQAELV+ R+AMLGV+G+LL ++    GI N+P WY AG  EY FA+  TLF+++ +L  +VE 
Subjt:  WLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVET

Query:  KRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ
        +R+ D K+PGS  Q+  F   + +L   E GYPGG + NPL  A  ++     K KEI NGRLAM+A LG  +Q  VT  GP DNL++H+S+PWH TI+Q
Subjt:  KRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ

Query:  TLSSS
        TL  +
Subjt:  TLSSS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic1.2e-5045.95Show/hide
Query:  MAVSLSAATATA--TARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAE
        MA SL A++A A  ++ +FL          ++ P  +    P  S R++ A      R  W PG  PP  LDGSL GDFGFDPLGL+ DPDSLKW VQAE
Subjt:  MAVSLSAATATA--TARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAE

Query:  LVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNP
        +VH R+AMLG +GI + + L   GI N P WY AG  EY F +K TLF+V+L+L+G+ E +R+ D   PGS   +  F    + L G + GYPGG   +P
Subjt:  LVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNP

Query:  LGLAKDIKI-AHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI
        LG          + + KEIKNGRLAM+A++G + Q   T TGPIDNL  HL++P H TI
Subjt:  LGLAKDIKI-AHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 56.0e-10181.9Show/hide
Query:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGF
        R TWLPGL+PP +LDG+LAGD+GFDPLGL EDP+SLKWYVQAELVHSRFAMLGV+GIL TDLLR TGI NLPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLE+AL GLEPGYPGGPLLNPLGLAKD++ AHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT1G45474.2 photosystem I light harvesting complex gene 56.0e-10181.9Show/hide
Query:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGF
        R TWLPGL+PP +LDG+LAGD+GFDPLGL EDP+SLKWYVQAELVHSRFAMLGV+GIL TDLLR TGI NLPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLE+AL GLEPGYPGGPLLNPLGLAKD++ AHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT1G61520.1 photosystem I light harvesting complex gene 31.7e-4237.59Show/hide
Query:  VSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL------KWYVQ
        VS S  ++  TAR        +S+S   + F   +    P +       Q   R  W        +LDGSL GD+GFDPLGL+ DP+        +W   
Subjt:  VSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSL------KWYVQ

Query:  AELVHSRFAMLGVSGILLTDLLRVTGI----SNLPVWYNAGAVEYG-----FANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGL-
         E+++ RFAMLG +G +  ++L   G+    + LP W+  G +        +A+  TLF++++ LMGF E +R  D+ +PGS  ++  F GLE  L G  
Subjt:  AELVHSRFAMLGVSGILLTDLLRVTGI----SNLPVWYNAGAVEYG-----FANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGL-

Query:  EPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTL
         P YPGGP  NPLG  KD K   + KLKE+KNGRLAM+A+LG F+Q  VT  GP  NL++HL++P +  ++ +L
Subjt:  EPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTL

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A49.4e-5445.42Show/hide
Query:  LSAATATATARAFLPQPS-----SSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAEL
        ++  T  A+A  F P  S     + SS  ++      S        S   +A+   +  WLPGL  P +L GSLAGD GFDPLGLAEDP++LKW+VQAEL
Subjt:  LSAATATATARAFLPQPS-----SSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAEL

Query:  VHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPL
        V+ R+AMLGV+G+LL ++    GI N+P WY+AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F   + +L   E GYPGG + NPL
Subjt:  VHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPL

Query:  GLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS
          A       + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+QT +
Subjt:  GLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS

AT3G61470.1 photosystem I light harvesting complex gene 28.8e-5245.95Show/hide
Query:  MAVSLSAATATA--TARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAE
        MA SL A++A A  ++ +FL          ++ P  +    P  S R++ A      R  W PG  PP  LDGSL GDFGFDPLGL+ DPDSLKW VQAE
Subjt:  MAVSLSAATATA--TARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAE

Query:  LVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNP
        +VH R+AMLG +GI + + L   GI N P WY AG  EY F +K TLF+V+L+L+G+ E +R+ D   PGS   +  F    + L G + GYPGG   +P
Subjt:  LVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNP

Query:  LGLAKDIKI-AHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI
        LG          + + KEIKNGRLAM+A++G + Q   T TGPIDNL  HL++P H TI
Subjt:  LGLAKDIKI-AHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCACTTTCAGCAGCCACTGCCACTGCCACTGCCAGAGCCTTCCTTCCGCAGCCCTCTTCTTCATCTTCCTCCTCCATTTCCGCGCCCTTTTACACTCCCTC
ATTCAACCCTAAACCCTCCCGCCGCTCAATAACAGCTCAAGCCCAATCTCAGCCTCGCCAAACATGGCTCCCCGGCCTCGACCCTCCCCTGCATCTCGACGGAAGCCTCG
CCGGCGATTTTGGATTCGACCCACTTGGCCTCGCCGAAGACCCAGATAGTTTGAAGTGGTACGTTCAAGCAGAGCTCGTTCATTCTCGCTTCGCCATGCTCGGCGTCTCT
GGAATTCTTCTCACAGATTTGCTTCGAGTGACAGGAATCAGTAACTTGCCAGTTTGGTACAATGCGGGTGCTGTGGAATATGGCTTTGCCAACAAAGAAACCCTCTTCAT
TGTTCAGCTGCTGTTGATGGGCTTTGTGGAAACCAAAAGATATATGGATTTCAAGAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAATCCGCTCTCA
GGGGTCTCGAACCCGGATATCCTGGGGGTCCTCTGCTGAATCCTCTTGGCCTGGCTAAAGATATCAAGATTGCACATGACTGGAAGCTCAAGGAGATTAAGAATGGACGG
CTGGCGATGGTAGCCATGCTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTAT
CCAGACCCTCTCGAGCTCAAGTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTTCACTTTCAGCAGCCACTGCCACTGCCACTGCCAGAGCCTTCCTTCCGCAGCCCTCTTCTTCATCTTCCTCCTCCATTTCCGCGCCCTTTTACACTCCCTC
ATTCAACCCTAAACCCTCCCGCCGCTCAATAACAGCTCAAGCCCAATCTCAGCCTCGCCAAACATGGCTCCCCGGCCTCGACCCTCCCCTGCATCTCGACGGAAGCCTCG
CCGGCGATTTTGGATTCGACCCACTTGGCCTCGCCGAAGACCCAGATAGTTTGAAGTGGTACGTTCAAGCAGAGCTCGTTCATTCTCGCTTCGCCATGCTCGGCGTCTCT
GGAATTCTTCTCACAGATTTGCTTCGAGTGACAGGAATCAGTAACTTGCCAGTTTGGTACAATGCGGGTGCTGTGGAATATGGCTTTGCCAACAAAGAAACCCTCTTCAT
TGTTCAGCTGCTGTTGATGGGCTTTGTGGAAACCAAAAGATATATGGATTTCAAGAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAATCCGCTCTCA
GGGGTCTCGAACCCGGATATCCTGGGGGTCCTCTGCTGAATCCTCTTGGCCTGGCTAAAGATATCAAGATTGCACATGACTGGAAGCTCAAGGAGATTAAGAATGGACGG
CTGGCGATGGTAGCCATGCTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTAT
CCAGACCCTCTCGAGCTCAAGTCCTTGA
Protein sequenceShow/hide protein sequence
MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVS
GILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGR
LAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP