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Lag0004291 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004291
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationchr6:2636588..2636941
RNA-Seq ExpressionLag0004291
SyntenyLag0004291
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039492.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa]8.1e-4480.16Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG------DADEDMEG---GEGRVVVVNLWVNDGEPMDVDSGSGHESEDSDSETQDEIMVE
        MPCKH+YHSDCIEKWL V GTCPVCRF MPVDD+  RKDGG      + DEDMEG   GEGRVVVVNLWVNDGEPMDV+SG  H SEDSDSE+QDEIMVE
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG------DADEDMEG---GEGRVVVVNLWVNDGEPMDVDSGSGHESEDSDSETQDEIMVE

Query:  VDDSSTQEQDPSSENSSSFSFSSFFN
        VD SSTQEQDPSSE+SSSFSFSSFFN
Subjt:  VDDSSTQEQDPSSENSSSFSFSSFFN

KAG6578580.1 E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4381.67Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST
        MPCKHLYHSDCIEKWL V GTCP+CRF MPVDDQEG+KD    DEDMEG EGRVVVVNLWVNDGEPMD   V+SG GH S DSDSE+ DEI VEVD SST
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST

Query:  QEQDPSSENSSSFSFSSFFN
        QEQDPSSE+SSSFSFSSFFN
Subjt:  QEQDPSSENSSSFSFSSFFN

XP_022939130.1 E3 ubiquitin-protein ligase RNF181-like [Cucurbita moschata]2.0e-4280.83Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST
        MPCKHLYHSDCIEKWL V GTCP+CRF MPVDDQEG+KD    DEDMEG E RVVVVNLWVNDGEPMD   V+SG GH S DSDSE+ DEI VEVD SST
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST

Query:  QEQDPSSENSSSFSFSSFFN
        QEQDPSSE+SSSFSFSSFFN
Subjt:  QEQDPSSENSSSFSFSSFFN

XP_022993365.1 E3 ubiquitin-protein ligase RNF181-like [Cucurbita maxima]5.3e-4380.83Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST
        MPCKH+YHSDCIEKWL V GTCP+CRF MPVDDQEG+KD    DEDMEG EGRVVVVNLWVNDGEPMD   V+SG GH S DSDSE+ DEI VEVD SST
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST

Query:  QEQDPSSENSSSFSFSSFFN
        QEQDPSSE+SSSFSFSSFFN
Subjt:  QEQDPSSENSSSFSFSSFFN

XP_023551536.1 E3 ubiquitin-protein ligase RNF181-like [Cucurbita pepo subsp. pepo]3.1e-4381.67Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST
        MPCKHLYHSDCIEKWL V GTCP+CRF MPVDDQEG+KD    DEDMEG EGRVVVVNLWVNDGEPMD   V+SG GH S DSDSE+ DEI VEVD SST
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST

Query:  QEQDPSSENSSSFSFSSFFN
        QEQDPSSE+SSSFSFSSFFN
Subjt:  QEQDPSSENSSSFSFSSFFN

TrEMBL top hitse value%identityAlignment
A0A0A0KS87 RING-type domain-containing protein3.7e-4276.52Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG-------DADEDM------EGGEGRVVVVNLWVNDGEPMDVDSGSGHESEDSDSETQDE
        MPCKH+YHSDCIEKWL V GTCPVCRFAMPVDD+  RKDGG       + +EDM      EGGEGRVVVVNLWVNDGEPMDV+SG  H SEDSDSE+QDE
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG-------DADEDM------EGGEGRVVVVNLWVNDGEPMDVDSGSGHESEDSDSETQDE

Query:  IMVEVDDSST--QEQDPSSENSSSFSFSSFFN
        IMVEVD SST  QEQDPSSE+SSSFSFSSFFN
Subjt:  IMVEVDDSST--QEQDPSSENSSSFSFSSFFN

A0A1S3CC03 E3 ubiquitin-protein ligase RING1-like4.2e-3878.57Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG------DADEDMEG---GEGRVVVVNLWVNDGEPMDVDSGSGHESEDSDSETQDEIMVE
        MPCKH+YHSDCIEKWL V GTCPVCRF MPVDD+  RKDGG      + DEDMEG   GEGRVVVVNLWVNDGEPMDV+SG  H SEDSDSE+QDEIMVE
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG------DADEDMEG---GEGRVVVVNLWVNDGEPMDVDSGSGHESEDSDSETQDEIMVE

Query:  VDDSSTQEQDPS
        VD SSTQEQDPS
Subjt:  VDDSSTQEQDPS

A0A5A7T7P7 E3 ubiquitin-protein ligase RING1-like3.9e-4480.16Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG------DADEDMEG---GEGRVVVVNLWVNDGEPMDVDSGSGHESEDSDSETQDEIMVE
        MPCKH+YHSDCIEKWL V GTCPVCRF MPVDD+  RKDGG      + DEDMEG   GEGRVVVVNLWVNDGEPMDV+SG  H SEDSDSE+QDEIMVE
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG------DADEDMEG---GEGRVVVVNLWVNDGEPMDVDSGSGHESEDSDSETQDEIMVE

Query:  VDDSSTQEQDPSSENSSSFSFSSFFN
        VD SSTQEQDPSSE+SSSFSFSSFFN
Subjt:  VDDSSTQEQDPSSENSSSFSFSSFFN

A0A6J1FLT0 E3 ubiquitin-protein ligase RNF181-like9.7e-4380.83Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST
        MPCKHLYHSDCIEKWL V GTCP+CRF MPVDDQEG+KD    DEDMEG E RVVVVNLWVNDGEPMD   V+SG GH S DSDSE+ DEI VEVD SST
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST

Query:  QEQDPSSENSSSFSFSSFFN
        QEQDPSSE+SSSFSFSSFFN
Subjt:  QEQDPSSENSSSFSFSSFFN

A0A6J1JYB9 E3 ubiquitin-protein ligase RNF181-like2.5e-4380.83Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST
        MPCKH+YHSDCIEKWL V GTCP+CRF MPVDDQEG+KD    DEDMEG EGRVVVVNLWVNDGEPMD   V+SG GH S DSDSE+ DEI VEVD SST
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMD---VDSGSGHESEDSDSETQDEIMVEVDDSST

Query:  QEQDPSSENSSSFSFSSFFN
        QEQDPSSE+SSSFSFSSFFN
Subjt:  QEQDPSSENSSSFSFSSFFN

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING17.5e-0840.98Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDD---------QEGRKDGGDADEDMEGGEG
        MPCKHLYH DC+  WL +  +CPVCR  +P DD          +G   G D D   +  +G
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDD---------QEGRKDGGDADEDMEGGEG

Q8LPN7 E3 ubiquitin-protein ligase RING1-like2.0e-0843.64Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDD------QEGRKDGGDADEDMEG
        MPCKH++H DC+  WL +  +CPVCRF +P DD       +G +  GD    +EG
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDD------QEGRKDGGDADEDMEG

Q9LQX2 E3 ubiquitin-protein ligase MPSR12.7e-1042.86Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPM-DVDSGSGHESEDSDSE
        MPCKH +H  CIEKWLG  G+CPVCR+ MPVD  E  K   D +E         + V    NDG  + D  +  G  S+  +SE
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPM-DVDSGSGHESEDSDSE

Q9SNB6 E3 ubiquitin-protein ligase RDUF14.8e-0740.58Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVD----DQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGE
        MPCKH++H DCI  WL +  +CPVCRF +P D      E     G     + GG   V   N  V +GE
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVD----DQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGE

Q9SPL2 E3 ubiquitin-protein ligase CIP82.2e-0757.14Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQE
        +PC H YH DCI  WLG   +CPVCRF +  DD E
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQE

Arabidopsis top hitse value%identityAlignment
AT1G14200.1 RING/U-box superfamily protein4.8e-1056.1Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG
        MPCKH +HS C+E+WLG   TCP+CR+ MPV++ E  K  G
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGG

AT1G26800.1 RING/U-box superfamily protein1.9e-1142.86Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPM-DVDSGSGHESEDSDSE
        MPCKH +H  CIEKWLG  G+CPVCR+ MPVD  E  K   D +E         + V    NDG  + D  +  G  S+  +SE
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPM-DVDSGSGHESEDSDSE

AT3G02340.1 RING/U-box superfamily protein1.4e-0957.14Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQE
        +PC H YH +CI  WLG+  TCPVCR+ +P DD E
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQE

AT3G19950.1 RING/U-box superfamily protein1.4e-0943.64Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDD------QEGRKDGGDADEDMEG
        MPCKH++H DC+  WL +  +CPVCRF +P DD       +G +  GD    +EG
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDD------QEGRKDGGDADEDMEG

AT5G15820.1 RING/U-box superfamily protein1.4e-0960Show/hide
Query:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQE
        +PCKH YH +CI  WLG+  TCPVCR  +P DD E
Subjt:  MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGCAAACATCTGTATCATTCGGATTGTATCGAGAAATGGTTGGGGGTTTGTGGAACCTGTCCGGTTTGTCGGTTCGCGATGCCGGTGGACGATCAGGAAGGGAG
GAAGGACGGCGGTGATGCTGATGAAGATATGGAAGGGGGAGAAGGCCGAGTAGTCGTAGTGAATCTGTGGGTTAACGATGGTGAACCGATGGATGTGGATTCGGGCTCGG
GGCATGAATCGGAGGACTCTGATTCGGAAACGCAAGATGAAATTATGGTCGAAGTGGATGATTCATCAACGCAAGAACAAGATCCCAGTTCTGAAAATTCTTCCTCATTT
TCATTTTCGTCTTTTTTCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTGCAAACATCTGTATCATTCGGATTGTATCGAGAAATGGTTGGGGGTTTGTGGAACCTGTCCGGTTTGTCGGTTCGCGATGCCGGTGGACGATCAGGAAGGGAG
GAAGGACGGCGGTGATGCTGATGAAGATATGGAAGGGGGAGAAGGCCGAGTAGTCGTAGTGAATCTGTGGGTTAACGATGGTGAACCGATGGATGTGGATTCGGGCTCGG
GGCATGAATCGGAGGACTCTGATTCGGAAACGCAAGATGAAATTATGGTCGAAGTGGATGATTCATCAACGCAAGAACAAGATCCCAGTTCTGAAAATTCTTCCTCATTT
TCATTTTCGTCTTTTTTCAACTAG
Protein sequenceShow/hide protein sequence
MPCKHLYHSDCIEKWLGVCGTCPVCRFAMPVDDQEGRKDGGDADEDMEGGEGRVVVVNLWVNDGEPMDVDSGSGHESEDSDSETQDEIMVEVDDSSTQEQDPSSENSSSF
SFSSFFN